RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TMEM67Q5HYA8 995 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 BLOC1S2Q6QNY1 142 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 ADGRF4Q8IZF3 695 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 STAG2Q8N3U4 1231 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 SLC43A3Q8NBI5 491 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 IL17RAQ96F46 866 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 JAKMIP1Q96N16 626 aaKnown RBP18.21■□□□□ 0.51
USB1-208ENST00000563207 SEMA6BQ9H3T3 888 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 VAT1LQ9HCJ6 419 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 VTA1Q9NP79 307 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 COL20A1Q9P218 1284 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 PRUNE2Q8WUY3 3088 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 MYH6P13533 1939 aa18.2■□□□□ 0.5
USB1-208ENST00000563207 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
USB1-208ENST00000563207 ITGA7Q13683 1181 aa18.2■□□□□ 0.5
USB1-208ENST00000563207 CDC37Q16543 378 aaPredicted RBP18.2■□□□□ 0.5
USB1-208ENST00000563207 ZNF697Q5TEC3 545 aa18.2■□□□□ 0.5
USB1-208ENST00000563207 MFSD5Q6N075 450 aa18.2■□□□□ 0.5
USB1-208ENST00000563207 FBXL16Q8N461 479 aa18.2■□□□□ 0.5
USB1-208ENST00000563207 CDX2Q99626 313 aaPredicted RBP18.2■□□□□ 0.5
USB1-208ENST00000563207 WDR11Q9BZH6 1224 aa18.2■□□□□ 0.5
USB1-208ENST00000563207 SENP2Q9HC62 589 aa18.2■□□□□ 0.5
USB1-208ENST00000563207 RBM47A0AV96 593 aaKnown RBP18.19■□□□□ 0.5
USB1-208ENST00000563207 GRXCR1A8MXD5 290 aa18.19■□□□□ 0.5
USB1-208ENST00000563207 B4GALT4O60513 344 aa18.19■□□□□ 0.5
USB1-208ENST00000563207 ARIH2O95376 493 aa18.19■□□□□ 0.5
USB1-208ENST00000563207 DUSP28Q4G0W2 176 aa18.19■□□□□ 0.5
USB1-208ENST00000563207 GPATCH4Q5T3I0 446 aaKnown RBP18.19■□□□□ 0.5
USB1-208ENST00000563207 CHST3Q7LGC8 479 aa18.19■□□□□ 0.5
USB1-208ENST00000563207 TAAR1Q96RJ0 339 aa18.19■□□□□ 0.5
USB1-208ENST00000563207 JMJD4Q9H9V9 463 aa18.19■□□□□ 0.5
USB1-208ENST00000563207 ZSWIM6Q9HCJ5 1215 aa18.19■□□□□ 0.5
USB1-208ENST00000563207 ADD3Q9UEY8 706 aaKnown RBP18.19■□□□□ 0.5
USB1-208ENST00000563207 CASTP20810 708 aaKnown RBP18.18■□□□□ 0.5
USB1-208ENST00000563207 EDNRBP24530 442 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 SMAD3P84022 425 aaKnown RBP18.18■□□□□ 0.5
USB1-208ENST00000563207 SLC35G1Q2M3R5 365 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 QRICH1Q2TAL8 776 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 TMEM240Q5SV17 173 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 RUFY3Q7L099 469 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 CATIPQ7Z7H3 387 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 MYLIPQ8WY64 445 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 MAP3K14Q99558 947 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 LY9Q9HBG7 655 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 CYP46A1Q9Y6A2 500 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 MROH7Q68CQ1 1323 aa18.18■□□□□ 0.5
USB1-208ENST00000563207 SH2B2O14492 632 aaPredicted RBP18.17■□□□□ 0.5
USB1-208ENST00000563207 MYL3P08590 195 aa18.17■□□□□ 0.5
USB1-208ENST00000563207 RPS6KB1P23443 525 aa18.17■□□□□ 0.5
USB1-208ENST00000563207 PBX2P40425 430 aa18.17■□□□□ 0.5
USB1-208ENST00000563207 CCL23P55773 120 aa18.17■□□□□ 0.5
USB1-208ENST00000563207 PDE4DQ08499 809 aa18.17■□□□□ 0.5
USB1-208ENST00000563207 ZNF365Q70YC5 407 aa18.17■□□□□ 0.5
USB1-208ENST00000563207 SGMS1Q86VZ5 419 aa18.17■□□□□ 0.5
USB1-208ENST00000563207 VWCEQ96DN2 955 aa18.17■□□□□ 0.5
USB1-208ENST00000563207 BACH2Q9BYV9 841 aa18.17■□□□□ 0.5
USB1-208ENST00000563207 Q9Y3F1 56 aa18.17■□□□□ 0.5
USB1-208ENST00000563207 CHD9Q3L8U1 2897 aa18.16■□□□□ 0.5
USB1-208ENST00000563207 CCDC69A6NI79 296 aa18.16■□□□□ 0.5
USB1-208ENST00000563207 DLL1O00548 723 aa18.16■□□□□ 0.5
USB1-208ENST00000563207 PPP1R11O60927 126 aaPredicted RBP18.16■□□□□ 0.5
USB1-208ENST00000563207 PARP1P09874 1014 aaKnown RBP18.16■□□□□ 0.5
USB1-208ENST00000563207 FGD1P98174 961 aa18.16■□□□□ 0.5
USB1-208ENST00000563207 PURAQ00577 322 aaKnown RBP18.16■□□□□ 0.5
USB1-208ENST00000563207 ASPRV1Q53RT3 343 aa18.16■□□□□ 0.5
USB1-208ENST00000563207 IL27Q8NEV9 243 aa18.16■□□□□ 0.5
USB1-208ENST00000563207 OR6J1Q8NGC5 347 aa18.16■□□□□ 0.5
USB1-208ENST00000563207 C22orf23Q9BZE7 217 aa18.16■□□□□ 0.5
USB1-208ENST00000563207 WNT8AQ9H1J5 351 aa18.16■□□□□ 0.5
USB1-208ENST00000563207 TRMT13Q9NUP7 481 aaKnown RBP18.16■□□□□ 0.5
USB1-208ENST00000563207 CXXC1Q9P0U4 656 aaPredicted RBP18.16■□□□□ 0.5
USB1-208ENST00000563207 OPLAHO14841 1288 aa18.15■□□□□ 0.5
USB1-208ENST00000563207 TLR3O15455 904 aaKnown RBP18.15■□□□□ 0.5
USB1-208ENST00000563207 DHX16O60231 1041 aaKnown RBP18.15■□□□□ 0.5
USB1-208ENST00000563207 CALM1P0DP23 149 aa18.15■□□□□ 0.5
USB1-208ENST00000563207 CALM2P0DP24 149 aa18.15■□□□□ 0.5
USB1-208ENST00000563207 CALM3P0DP25 149 aa18.15■□□□□ 0.5
USB1-208ENST00000563207 CYP2C9P11712 490 aa18.15■□□□□ 0.5
USB1-208ENST00000563207 RBM25P49756 843 aaKnown RBP18.15■□□□□ 0.5
USB1-208ENST00000563207 COL9A3Q14050 684 aaPredicted RBP18.15■□□□□ 0.5
USB1-208ENST00000563207 SYNE3Q6ZMZ3 975 aa18.15■□□□□ 0.5
USB1-208ENST00000563207 NFXL1Q6ZNB6 911 aa18.15■□□□□ 0.5
USB1-208ENST00000563207 SYTL5Q8TDW5 730 aaPredicted RBP18.15■□□□□ 0.5
USB1-208ENST00000563207 NOC4LQ9BVI4 516 aaKnown RBP18.15■□□□□ 0.5
USB1-208ENST00000563207 AGXT2Q9BYV1 514 aa18.15■□□□□ 0.5
USB1-208ENST00000563207 HIPK3Q9H422 1215 aa18.15■□□□□ 0.5
USB1-208ENST00000563207 GBF1Q92538 1859 aa18.15■□□□□ 0.5
USB1-208ENST00000563207 CABYRO75952 493 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 DDAH1O94760 285 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 TXNP10599 105 aaKnown RBP18.14■□□□□ 0.49
USB1-208ENST00000563207 TROAPQ12815 778 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 PPIGQ13427 754 aaKnown RBP eCLIP18.14■□□□□ 0.491e-8■□□□□ 8.5
USB1-208ENST00000563207 GRIN2CQ14957 1233 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 LY6KQ17RY6 165 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 RASIP1Q5U651 963 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 ZNF654Q8IZM8 581 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 TMEM199Q8N511 208 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 DNERQ8NFT8 737 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 SCLYQ96I15 445 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 ALDH8A1Q9H2A2 487 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms