RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 PSPC1Q8WXF1 523 aaKnown RBP12.32□□□□□ -0.44
INO80-205ENST00000558357 GJA10Q969M2 543 aa12.32□□□□□ -0.44
INO80-205ENST00000558357 EDC3Q96F86 508 aaKnown RBP12.32□□□□□ -0.44
INO80-205ENST00000558357 MRPL46Q9H2W6 279 aaKnown RBP12.32□□□□□ -0.44
INO80-205ENST00000558357 SUGCTQ9HAC7 445 aa12.32□□□□□ -0.44
INO80-205ENST00000558357 SMYD2Q9NRG4 433 aa12.32□□□□□ -0.44
INO80-205ENST00000558357 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 PPP6R2O75170 966 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 CASP2P42575 452 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 IFNAR2P48551 515 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 IFT88Q13099 833 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 TFDP1Q14186 410 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 CERKLQ49MI3 558 aaPredicted RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 DHTKD1Q96HY7 919 aaPredicted RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 FAM81BQ96LP2 452 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 PAGR1Q9BTK6 254 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 EFHD1Q9BUP0 239 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 THRAP3Q9Y2W1 955 aaKnown RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 CLIC4Q9Y696 253 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 XPOTO43592 962 aaKnown RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 TRAPPC10P48553 1259 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 IFRD2Q12894 506 aaPredicted RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 ODR4Q5SWX8 454 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 TMTC4Q5T4D3 741 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 TUBB6Q9BUF5 446 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 NCKAP5LQ9HCH0 1330 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 PEX19P40855 299 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 ESRRGP62508 458 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 RSBN1LQ6PCB5 846 aaPredicted RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 ANKRD13CQ8N6S4 541 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 DISC1Q9NRI5 854 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 GNGT2O14610 69 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 HSPA8P11142 646 aaKnown RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 GSPT1P15170 499 aaKnown RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 KPNA2P52292 529 aaKnown RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 ICA1Q05084 483 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 DCAF15Q66K64 600 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 TTC19Q6DKK2 380 aaPredicted RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 EFCAB13Q8IY85 973 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 MCUQ8NE86 351 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 TDRD7Q8NHU6 1098 aaKnown RBP12.31□□□□□ -0.44
INO80-205ENST00000558357 TBX22Q9Y458 520 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 PCDHB4Q9Y5E5 795 aa12.31□□□□□ -0.44
INO80-205ENST00000558357 APOEP02649 317 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 GAP43P17677 238 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 PABPC4Q13310 644 aaKnown RBP eCLIP12.3□□□□□ -0.44
INO80-205ENST00000558357 FBXO41Q8TF61 875 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 SDR42E1Q8WUS8 393 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 PPWD1Q96BP3 646 aaKnown RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 CCDC124Q96CT7 223 aaKnown RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 ABCC4O15439 1325 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 RAPGEF6Q8TEU7 1601 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 HEXIM1O94992 359 aaKnown RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 ECEL1O95672 775 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 PTPREP23469 700 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 ATP2B4P23634 1241 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 PDIA3P30101 505 aaKnown RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 MAPK4P31152 587 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 PSMC2P35998 433 aaKnown RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 MSH2P43246 934 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 KSR1Q8IVT5 923 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 RNF14Q9UBS8 474 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 PGRMC1O00264 195 aaKnown RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 PFDN1O60925 122 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 CPP00450 1065 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 GOLGA8HP0CJ92 632 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 SESTD1Q86VW0 696 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 LARP4BQ92615 738 aaKnown RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 AK8Q96MA6 479 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 CNOT10Q9H9A5 744 aaKnown RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 FAM8A1Q9UBU6 413 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 SYNJ2BP-COX16A0A087WUM0 186 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 ERVV-2B6SEH9 535 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 IKBKBO14920 756 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 FGAP02671 866 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 AFPP02771 609 aaKnown RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 POLA2Q14181 598 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 IQCB1Q15051 598 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 DCLK2Q8N568 766 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 CCHCR1Q8TD31 782 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 FOXP1Q9H334 677 aaPredicted RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 COX16Q9P0S2 106 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 KIAA1024Q9UPX6 916 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
INO80-205ENST00000558357 PHLPP2Q6ZVD8 1323 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 HSPA6P17066 643 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 NR2F2P24468 414 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 SGO2Q562F6 1265 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 CCDC24Q8N4L8 307 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 FBXO18Q8NFZ0 1043 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 GPT2Q8TD30 523 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 ATP6V1E2Q96A05 226 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 ZNF653Q96CK0 615 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 EPB41L5Q9HCM4 733 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 NUB1Q9Y5A7 615 aa12.3□□□□□ -0.44
INO80-205ENST00000558357 PTPRKQ15262 1439 aa12.29□□□□□ -0.44
INO80-205ENST00000558357 FAM135BQ49AJ0 1406 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms