RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SCHIP1Q9P0W5 487 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 STAP2Q9UGK3 403 aa11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 MAP4K5Q9Y4K4 846 aa11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 MYH8P13535 1937 aa11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 RPTORQ8N122 1335 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 SALL3Q9BXA9 1300 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 GPAA1O43292 621 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 PEX10O60683 326 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 CNMDO75829 334 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 TFRCP02786 760 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 CYP2B6P20813 491 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 GTF2F1P35269 517 aaKnown RBP eCLIP11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 ICA1Q05084 483 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 GNL2Q13823 731 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 FAM26DQ5JW98 314 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 TBCELQ5QJ74 424 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 GPR142Q7Z601 462 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 OTUD7AQ8TE49 926 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 USP6NLQ92738 828 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 SHISA4Q96DD7 197 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 MYO19Q96H55 970 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 NACAP1Q9BZK3 213 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 PORCNQ9H237 461 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 RWDD1Q9H446 243 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 VCPKMTQ9H867 229 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 MKNK2Q9HBH9 465 aa11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 FCF1Q9Y324 198 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-228ENST00000557033 PLXNB2O15031 1838 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 PNMA6FA0A0J9YX94 578 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 MINDY4BA8MYZ0 360 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 SMIM22K7EJ46 135 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 APPP05067 770 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 EEF2P13639 858 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 RGS2P41220 211 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 VASH1Q7L8A9 365 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 UBE2Q1Q7Z7E8 422 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 ATCAYQ86WG3 371 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 SLC9A9Q8IVB4 645 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 IFNL3Q8IZI9 196 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 GJD3Q8N144 294 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 MB21D1Q8N884 522 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 DEFB118Q96PH6 123 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 MTRQ99707 1265 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 FSD1Q9BTV5 496 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 CWC22Q9HCG8 908 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 BTBD7Q9P203 1132 aa11.68□□□□□ -0.54
HNRNPC-228ENST00000557033 SLC15A5A6NIM6 579 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 A6NJY4 79 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 M0R2C6 588 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 STRNO43815 780 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 BRD2P25440 801 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 GNA15P30679 374 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 TDO2P48775 406 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 RBL2Q08999 1139 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 ZMYM1Q5SVZ6 1142 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 MAP3K21Q5TCX8 1036 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 ZNF444Q8N0Y2 327 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 TRIB2Q92519 343 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 EVI5LQ96CN4 794 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 HTATIP2Q9BUP3 242 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.67□□□□□ -0.542e-34■■□□□ 11.9
HNRNPC-228ENST00000557033 POLIQ9UNA4 740 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 PDE4DIPQ5VU43 2346 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 BRCA2P51587 3418 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 ROBO3Q96MS0 1386 aa11.67□□□□□ -0.54
HNRNPC-228ENST00000557033 SLC3A2P08195 630 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 ZKSCAN1P17029 563 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 PDE1AP54750 535 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 CCDC144BQ3MJ40 725 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 KIAA1755Q5JYT7 1200 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 SMC5Q8IY18 1101 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 SHCBP1Q8NEM2 672 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 ZNF516Q92618 1163 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 SEC62Q99442 399 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 APBA2Q99767 749 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 TMPRSS4Q9NRS4 437 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 NYAP2Q9P242 653 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 ADAMTS5Q9UNA0 930 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 AK5Q9Y6K8 562 aa11.66□□□□□ -0.54
HNRNPC-228ENST00000557033 MKI67P46013 3256 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 TLDC2A0PJX2 215 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 FLOT1O75955 427 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 FARP2O94887 1054 aaPredicted RBP11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 HOXC6P09630 235 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 VARSP26640 1264 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 MZF1P28698 734 aaPredicted RBP11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 SMTNP53814 917 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 PDE4BQ07343 736 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 TRIM32Q13049 653 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 GRB14Q14449 540 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 WDR78Q5VTH9 848 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 SPICE1Q8N0Z3 855 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 DPF3Q92784 378 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 MKL1Q969V6 931 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
HNRNPC-228ENST00000557033 MOV10L1Q9BXT6 1211 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms