RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 USP17L8P0C7I0 530 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 TNFRSF8P28908 595 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 MAGEA1P43355 309 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 SF3B3Q15393 1217 aaKnown RBP19.47■□□□□ 0.71
SYNE3-202ENST00000553340 MAN2A1Q16706 1144 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 LETM2Q2VYF4 491 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 HAUS3Q68CZ6 603 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 C8orf74Q6P047 294 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 KRT25Q7Z3Z0 450 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 CCDC155Q8N6L0 562 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 SLC39A2Q9NP94 309 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 ZNF652Q9Y2D9 606 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 MYH10P35580 1976 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 KIAA1551Q9HCM1 1747 aa19.47■□□□□ 0.71
SYNE3-202ENST00000553340 EPHB6O15197 1021 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 PRDX5P30044 214 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 GTF2A1P52655 376 aaPredicted RBP19.46■□□□□ 0.71
SYNE3-202ENST00000553340 CALML4Q96GE6 196 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 FAM169AQ9Y6X4 670 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 LRRC53A6NM62 1247 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 PJA2O43164 708 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 MRPS25P82663 173 aaKnown RBP19.46■□□□□ 0.71
SYNE3-202ENST00000553340 NONOQ15233 471 aaKnown RBP eCLIP19.46■□□□□ 0.71
SYNE3-202ENST00000553340 SLC35G1Q2M3R5 365 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 GLE1Q53GS7 698 aaKnown RBP19.46■□□□□ 0.71
SYNE3-202ENST00000553340 RRAGAQ7L523 313 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 PLCD3Q8N3E9 789 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 HPS3Q969F9 1004 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 GRIN2DO15399 1336 aa19.46■□□□□ 0.71
SYNE3-202ENST00000553340 TECP42680 631 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 ERFEQ4G0M1 354 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 C3orf67Q6ZVT6 689 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 TSEN2Q8NCE0 465 aaKnown RBP19.45■□□□□ 0.7
SYNE3-202ENST00000553340 ZMYND12Q9H0C1 365 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 MKNK2Q9HBH9 465 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 ABCB11O95342 1321 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 A0A0G2JS52 829 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 C12orf60Q5U649 245 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 SV2BQ7L1I2 683 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 EHD4Q9H223 541 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 SMARCAL1Q9NZC9 954 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 MTMR7Q9Y216 660 aa19.45■□□□□ 0.7
SYNE3-202ENST00000553340 ERLIN2O94905 339 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 HIBADHP31937 336 aaKnown RBP19.44■□□□□ 0.7
SYNE3-202ENST00000553340 NAPAP54920 295 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 SKOR1P84550 965 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 NNTQ13423 1086 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 NOX5Q96PH1 765 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 LZTS2Q9BRK4 669 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 TSKSQ9UJT2 592 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 TSPY3P0CV98 308 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 TSPY8P0CW00 308 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 KLRK1P26718 216 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 NEK8Q86SG6 692 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 RNF10Q8N5U6 811 aaKnown RBP19.44■□□□□ 0.7
SYNE3-202ENST00000553340 ARL8AQ96BM9 186 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 TLR10Q9BXR5 811 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 EHD2Q9NZN4 543 aa19.44■□□□□ 0.7
SYNE3-202ENST00000553340 USP17L3A6NCW0 530 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 USP17L4A6NCW7 530 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 PALM3A6NDB9 673 aaPredicted RBP19.43■□□□□ 0.7
SYNE3-202ENST00000553340 NCK2O43639 380 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 CFAP221Q4G0U5 840 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 TTMPQ5BVD1 217 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 USP17L1Q7RTZ2 530 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 IFT20Q8IY31 132 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 CELF1Q92879 486 aaKnown RBP19.43■□□□□ 0.7
SYNE3-202ENST00000553340 MMTAG2Q9BU76 263 aaKnown RBP19.43■□□□□ 0.7
SYNE3-202ENST00000553340 RBM12Q9NTZ6 932 aaKnown RBP19.43■□□□□ 0.7
SYNE3-202ENST00000553340 RNF14Q9UBS8 474 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 TAF1P21675 1872 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 LOC102724428A0A0B4J2F2 783 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 SIK1P57059 783 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 CACNA2D4Q7Z3S7 1137 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 ANKRD13CQ8N6S4 541 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 BAP1Q92560 729 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 DYNLL2Q96FJ2 89 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 C6orf50Q9HD87 102 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 SALL4Q9UJQ4 1053 aa19.43■□□□□ 0.7
SYNE3-202ENST00000553340 PVALEFA0A1B0GWK0 134 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 GNA11P29992 359 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 NAP1L1P55209 391 aaKnown RBP19.42■□□□□ 0.7
SYNE3-202ENST00000553340 RASSF7Q02833 373 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 UNC13DQ70J99 1090 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 DZIP1Q86YF9 867 aaKnown RBP19.42■□□□□ 0.7
SYNE3-202ENST00000553340 EDEM3Q9BZQ6 932 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 RABEP2Q9H5N1 569 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 TFCP2L1Q9NZI6 479 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 STX8Q9UNK0 236 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 SSU72P8A0A1W2PR75 194 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 LIG3P49916 1009 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 LRRC63Q05C16 580 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 GFPT1Q06210 699 aaPredicted RBP19.42■□□□□ 0.7
SYNE3-202ENST00000553340 ASTE1Q2TB18 679 aaPredicted RBP19.42■□□□□ 0.7
SYNE3-202ENST00000553340 KLHDC7AQ5VTJ3 777 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 TTC19Q6DKK2 380 aaPredicted RBP19.42■□□□□ 0.7
SYNE3-202ENST00000553340 MMS22LQ6ZRQ5 1243 aa19.42■□□□□ 0.7
SYNE3-202ENST00000553340 ZNF444Q8N0Y2 327 aaPredicted RBP19.42■□□□□ 0.7
SYNE3-202ENST00000553340 GUF1Q8N442 669 aaKnown RBP19.42■□□□□ 0.7
SYNE3-202ENST00000553340 MTMR8Q96EF0 704 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms