RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 ZFYVE9O95405 1425 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 SIPA1L2Q9P2F8 1722 aaPredicted RBP8□□□□□ -1.13
TGFBR1-208ENST00000550253 CRTAMO95727 393 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 ATF3P18847 181 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 GRB10Q13322 594 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 NBPF9Q3BBW0 867 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 NOL9Q5SY16 702 aaKnown RBP8□□□□□ -1.13
TGFBR1-208ENST00000550253 UBE2R2Q712K3 238 aaPredicted RBP8□□□□□ -1.13
TGFBR1-208ENST00000550253 FBXO11Q86XK2 927 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 PASD1Q8IV76 773 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 PHF6Q8IWS0 365 aaKnown RBP eCLIP8□□□□□ -1.13
TGFBR1-208ENST00000550253 SMYD4Q8IYR2 804 aaPredicted RBP8□□□□□ -1.13
TGFBR1-208ENST00000550253 COG1Q8WTW3 980 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 CAMKK2Q96RR4 588 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 SPOCK3Q9BQ16 436 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 NOL6Q9H6R4 1146 aaKnown RBP8□□□□□ -1.13
TGFBR1-208ENST00000550253 PIDD1Q9HB75 910 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 CYP26B1Q9NR63 512 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 FAM105AQ9NUU6 356 aa8□□□□□ -1.13
TGFBR1-208ENST00000550253 NXF1Q9UBU9 619 aaKnown RBP8□□□□□ -1.13
TGFBR1-208ENST00000550253 SHPRHQ149N8 1683 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 B4E1Z4 1266 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 SHISA8B8ZZ34 492 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 SNRPB2P08579 225 aaKnown RBP7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 ASPAP45381 313 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 KCNJ6P48051 423 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 HLTFQ14527 1009 aaKnown RBP eCLIP7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 PPP2R5DQ14738 602 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 PRSS53Q2L4Q9 553 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 PIK3R6Q5UE93 754 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 SYDE2Q5VT97 1194 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 DENND5AQ6IQ26 1287 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 STYK1Q6J9G0 422 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 ZCCHC8Q6NZY4 707 aaKnown RBP7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 OR2W6PQ8NHA6 318 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 ARNT2Q9HBZ2 717 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 SSU72Q9NP77 194 aaKnown RBP7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 CRTAC1Q9NQ79 661 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 AASDHPPTQ9NRN7 309 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 FBXL21Q9UKT6 434 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 PCOLCE2Q9UKZ9 415 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 SPEF1Q9Y4P9 236 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 ACTL7BQ9Y614 415 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 TNKSO95271 1327 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 DIP2AQ14689 1571 aa7.99□□□□□ -1.13
TGFBR1-208ENST00000550253 H3BM21 787 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 OIP5O43482 229 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 CPP00450 1065 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 VSIG8P0DPA2 414 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 SKOR2Q2VWA4 1001 aaPredicted RBP7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 NXNQ6DKJ4 435 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 ABHD17CQ6PCB6 329 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 ZBTB46Q86UZ6 589 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 KIF18BQ86Y91 864 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 TCEAL8Q8IYN2 117 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 FIBCD1Q8N539 461 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 C2CD4AQ8NCU7 369 aaPredicted RBP7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 KREMEN2Q8NCW0 462 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 RNF141Q8WVD5 230 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 WNK4Q96J92 1243 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 ASPNQ9BXN1 380 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 PRDM14Q9GZV8 571 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 PRR13Q9NZ81 148 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 PCDHA9Q9Y5H5 950 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 FGD6Q6ZV73 1430 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 E9PCH4 1651 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 AHDC1Q5TGY3 1603 aaPredicted RBP7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 KRT18P05783 430 aaKnown RBP7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 SCNN1BP51168 640 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 FAM102BQ5T8I3 360 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 LETMD1Q6P1Q0 360 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 ACAD11Q709F0 780 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 USP53Q70EK8 1073 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 CDH24Q86UP0 819 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 NPAS3Q8IXF0 933 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 ZNF526Q8TF50 670 aaPredicted RBP7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 DCAF4Q8WV16 495 aa7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 APOBEC2Q9Y235 224 aaKnown RBP7.98□□□□□ -1.13
TGFBR1-208ENST00000550253 MSH6P52701 1360 aa7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 JCADQ9P266 1359 aa7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 AQP7O14520 342 aa7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 VAMP4O75379 141 aa7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 ABLIM3O94929 683 aa7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 SLITRK5O94991 958 aa7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 PYGMP11217 842 aa7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 ECI1P42126 302 aa7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 SNW1Q13573 536 aaKnown RBP7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 TRAPPC3LQ5T215 181 aa7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 FMR1NBQ8N0W7 255 aaPredicted RBP7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 C12orf50Q8NA57 414 aaPredicted RBP7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 GPR55Q9Y2T6 319 aaPredicted RBP7.97□□□□□ -1.13
TGFBR1-208ENST00000550253 PLEKHG1Q9ULL1 1385 aa7.96□□□□□ -1.13
TGFBR1-208ENST00000550253 M0R2C6 588 aa7.96□□□□□ -1.14
TGFBR1-208ENST00000550253 PRPF3O43395 683 aaKnown RBP7.96□□□□□ -1.14
TGFBR1-208ENST00000550253 PLIN1O60240 522 aa7.96□□□□□ -1.14
TGFBR1-208ENST00000550253 RFPL1O75677 317 aa7.96□□□□□ -1.14
TGFBR1-208ENST00000550253 FBXO21O94952 628 aa7.96□□□□□ -1.14
TGFBR1-208ENST00000550253 ADAMTS2O95450 1211 aa7.96□□□□□ -1.14
TGFBR1-208ENST00000550253 KRT76Q01546 638 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms