RNA–Protein interactions for RNA: ENST00000549621.5

RITA1-202, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RITA1, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-202ENST00000549621 C7orf25Q9BPX7 421 aa24.45■■□□□ 1.5
RITA1-202ENST00000549621 NUDT12Q9BQG2 462 aa24.45■■□□□ 1.5
RITA1-202ENST00000549621 KCNMB3Q9NPA1 279 aa24.45■■□□□ 1.5
RITA1-202ENST00000549621 STK17AQ9UEE5 414 aa24.45■■□□□ 1.5
RITA1-202ENST00000549621 ZNF541Q9H0D2 1346 aa24.45■■□□□ 1.5
RITA1-202ENST00000549621 PLA2G6O60733 806 aa24.44■■□□□ 1.5
RITA1-202ENST00000549621 PRCPP42785 496 aa24.44■■□□□ 1.5
RITA1-202ENST00000549621 SEMA3FQ13275 785 aa24.44■■□□□ 1.5
RITA1-202ENST00000549621 TBC1D10BQ4KMP7 808 aaPredicted RBP24.44■■□□□ 1.5
RITA1-202ENST00000549621 SNX29Q8TEQ0 813 aa24.44■■□□□ 1.5
RITA1-202ENST00000549621 CNOT7Q9UIV1 285 aaKnown RBP24.44■■□□□ 1.5
RITA1-202ENST00000549621 SREBF1P36956 1147 aa24.44■■□□□ 1.5
RITA1-202ENST00000549621 TMEM119Q4V9L6 283 aa24.44■■□□□ 1.5
RITA1-202ENST00000549621 NELFBQ8WX92 580 aa24.44■■□□□ 1.5
RITA1-202ENST00000549621 COBLO75128 1261 aa24.43■■□□□ 1.5
RITA1-202ENST00000549621 FOSP01100 380 aaPredicted RBP24.43■■□□□ 1.5
RITA1-202ENST00000549621 SKILP12757 684 aa24.43■■□□□ 1.5
RITA1-202ENST00000549621 PTPN21Q16825 1174 aa24.43■■□□□ 1.5
RITA1-202ENST00000549621 ADSSL1Q8N142 457 aa24.43■■□□□ 1.5
RITA1-202ENST00000549621 CHURC1Q8WUH1 139 aa24.43■■□□□ 1.5
RITA1-202ENST00000549621 KIFC2Q96AC6 838 aa24.43■■□□□ 1.5
RITA1-202ENST00000549621 HACL1Q9UJ83 578 aa24.43■■□□□ 1.5
RITA1-202ENST00000549621 PIK3CDO00329 1044 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 KIF4BQ2VIQ3 1234 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 KRT79Q5XKE5 535 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 FAM160B2Q86V87 743 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 A0A1B0GTH6 734 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 SPDYE3A6NKU9 549 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 HOXA13P31271 388 aaPredicted RBP24.42■■□□□ 1.5
RITA1-202ENST00000549621 CCDC174Q6PII3 467 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 GIMAP8Q8ND71 665 aaPredicted RBP24.42■■□□□ 1.5
RITA1-202ENST00000549621 CDK5RAP3Q96JB5 506 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 ZNF341Q9BYN7 854 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 PCDHA12Q9UN75 941 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 MAPK8IP1Q9UQF2 711 aa24.42■■□□□ 1.5
RITA1-202ENST00000549621 MARCH6O60337 910 aa24.41■■□□□ 1.5
RITA1-202ENST00000549621 ASIC1P78348 528 aa24.41■■□□□ 1.5
RITA1-202ENST00000549621 FBXO28Q9NVF7 368 aa24.41■■□□□ 1.5
RITA1-202ENST00000549621 FEM1BQ9UK73 627 aa24.41■■□□□ 1.5
RITA1-202ENST00000549621 SFPQP23246 707 aaKnown RBP eCLIP24.4■■□□□ 1.5
RITA1-202ENST00000549621 AMPD3Q01432 767 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 TRAF1Q13077 416 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 DHX8Q14562 1220 aaKnown RBP24.4■■□□□ 1.5
RITA1-202ENST00000549621 MCM6Q14566 821 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 ECM1Q16610 540 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 KCNK18Q7Z418 384 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 ETNPPLQ8TBG4 499 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 LARP4BQ92615 738 aaKnown RBP24.4■■□□□ 1.5
RITA1-202ENST00000549621 RAD54LQ92698 747 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 LENG9Q96B70 501 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 NR1I3Q14994 352 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 SV2BQ7L1I2 683 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 UIMC1Q96RL1 719 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 FEZ1Q99689 392 aa24.4■■□□□ 1.5
RITA1-202ENST00000549621 Q4G0T1 1027 aa24.39■■□□□ 1.5
RITA1-202ENST00000549621 HYIQ5T013 277 aa24.39■■□□□ 1.5
RITA1-202ENST00000549621 UPF1Q92900 1129 aaKnown RBP eCLIP24.39■■□□□ 1.52e-7■■■■■ 31.4
RITA1-202ENST00000549621 EXOC1Q9NV70 894 aa24.39■■□□□ 1.5
RITA1-202ENST00000549621 R3HCC1Q9Y3T6 440 aaKnown RBP24.39■■□□□ 1.5
RITA1-202ENST00000549621 DOCK1Q14185 1865 aa24.39■■□□□ 1.5
RITA1-202ENST00000549621 MYMKA6NI61 221 aa24.39■■□□□ 1.49
RITA1-202ENST00000549621 CIITAP33076 1130 aa24.39■■□□□ 1.49
RITA1-202ENST00000549621 TBX2Q13207 712 aaPredicted RBP24.39■■□□□ 1.49
RITA1-202ENST00000549621 TPD52L1Q16890 204 aaPredicted RBP24.39■■□□□ 1.49
RITA1-202ENST00000549621 PRR16Q569H4 304 aa24.39■■□□□ 1.49
RITA1-202ENST00000549621 TEX2Q8IWB9 1127 aa24.39■■□□□ 1.49
RITA1-202ENST00000549621 DEFB129Q9H1M3 183 aa24.39■■□□□ 1.49
RITA1-202ENST00000549621 ADD3Q9UEY8 706 aaKnown RBP24.39■■□□□ 1.49
RITA1-202ENST00000549621 FAM86B1E9PN63 330 aa24.38■■□□□ 1.49
RITA1-202ENST00000549621 FAM86B2P0C5J1 330 aa24.38■■□□□ 1.49
RITA1-202ENST00000549621 PDE4DQ08499 809 aa24.38■■□□□ 1.49
RITA1-202ENST00000549621 DNTTIP2Q5QJE6 756 aaKnown RBP24.38■■□□□ 1.49
RITA1-202ENST00000549621 CCDC47Q96A33 483 aaKnown RBP24.38■■□□□ 1.49
RITA1-202ENST00000549621 TRIM49BA6NDI0 452 aa24.37■■□□□ 1.49
RITA1-202ENST00000549621 SLFN12Q8IYM2 578 aa24.37■■□□□ 1.49
RITA1-202ENST00000549621 KDM3AQ9Y4C1 1321 aa24.37■■□□□ 1.49
RITA1-202ENST00000549621 TBX3O15119 743 aa24.37■■□□□ 1.49
RITA1-202ENST00000549621 CTNND1O60716 968 aaKnown RBP24.37■■□□□ 1.49
RITA1-202ENST00000549621 CYP3A4P08684 503 aa24.37■■□□□ 1.49
RITA1-202ENST00000549621 INPP5BP32019 993 aa24.37■■□□□ 1.49
RITA1-202ENST00000549621 PMS1P54277 932 aaKnown RBP24.37■■□□□ 1.49
RITA1-202ENST00000549621 NBPF12Q5TAG4 269 aaPredicted RBP24.37■■□□□ 1.49
RITA1-202ENST00000549621 SPECC1LQ69YQ0 1117 aa24.37■■□□□ 1.49
RITA1-202ENST00000549621 TBC1D5Q92609 795 aa24.37■■□□□ 1.49
RITA1-202ENST00000549621 GINM1Q9NU53 330 aa24.37■■□□□ 1.49
RITA1-202ENST00000549621 DICER1Q9UPY3 1922 aaKnown RBP24.36■■□□□ 1.49
RITA1-202ENST00000549621 CCT6AP40227 531 aaKnown RBP24.36■■□□□ 1.49
RITA1-202ENST00000549621 SPIRE1Q08AE8 756 aa24.36■■□□□ 1.49
RITA1-202ENST00000549621 STIM1Q13586 685 aa24.36■■□□□ 1.49
RITA1-202ENST00000549621 SAMD1Q6SPF0 538 aaPredicted RBP24.36■■□□□ 1.49
RITA1-202ENST00000549621 KIAA1683Q9H0B3 1180 aa24.36■■□□□ 1.49
RITA1-202ENST00000549621 LIMA1Q9UHB6 759 aaKnown RBP24.36■■□□□ 1.49
RITA1-202ENST00000549621 WDR46O15213 610 aaKnown RBP24.35■■□□□ 1.49
RITA1-202ENST00000549621 TEX33O43247 280 aa24.35■■□□□ 1.49
RITA1-202ENST00000549621 CFBP00751 764 aa24.35■■□□□ 1.49
RITA1-202ENST00000549621 STAT3P40763 770 aa24.35■■□□□ 1.49
RITA1-202ENST00000549621 STK4Q13043 487 aa24.35■■□□□ 1.49
RITA1-202ENST00000549621 CNNM4Q6P4Q7 775 aa24.35■■□□□ 1.49
RITA1-202ENST00000549621 FCHSD1Q86WN1 690 aa24.35■■□□□ 1.49
RITA1-202ENST00000549621 CTAGE1Q96RT6 745 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms