RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, human

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM258-208	ENST00000545210	GPATCH3	Q96I76	525 aa		13.6	□□□□□ -0.23
TMEM258-208	ENST00000545210	RANBP17	Q9H2T7	1088 aa	Known RBP	13.6	□□□□□ -0.23
TMEM258-208	ENST00000545210	NOD1	Q9Y239	953 aa		13.6	□□□□□ -0.23
TMEM258-208	ENST00000545210	NLRC5	Q86WI3	1866 aa		13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210		A6NJR5	290 aa		13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	BAIAP3	O94812	1187 aa		13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	CALML3	P27482	149 aa		13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	CTDSPL2	Q05D32	466 aa		13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	PDE4D	Q08499	809 aa		13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	PPP2R5B	Q15173	497 aa		13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	COPS5	Q92905	334 aa		13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	ZBED2	Q9BTP6	218 aa		13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	CHMP4B	Q9H444	224 aa	Known RBP	13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	MTUS1	Q9ULD2	1270 aa		13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
TMEM258-208	ENST00000545210	MUC6	Q6W4X9	2439 aa		13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	LOC102724159	A0A0B4J2E5	919 aa		13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	PI4K2B	G5E9Z4	385 aa		13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	NKRF	O15226	690 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	KPNA6	O60684	536 aa		13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	WDR5	P61964	334 aa	Known RBP	13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	PTPN11	Q06124	597 aa	Predicted RBP	13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	PWP2	Q15269	919 aa	Known RBP	13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	PTGIS	Q16647	500 aa		13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	SCFD2	Q8WU76	684 aa		13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	DCAF4	Q8WV16	495 aa		13.58	□□□□□ -0.24
TMEM258-208	ENST00000545210	MICAL3	Q7RTP6	2002 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	RBAK-RBAKDN	I3L0D1	243 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	RANBP6	O60518	1105 aa	Known RBP	13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	TXN	P10599	105 aa	Known RBP	13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	DEFB103A	P81534	67 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	GPNMB	Q14956	572 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	SYDE2	Q5VT97	1194 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	RNF207	Q6ZRF8	634 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	CCDC155	Q8N6L0	562 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	CLEC4D	Q8WXI8	215 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	CTAGE1	Q96RT6	745 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	GPCPD1	Q9NPB8	672 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	LMCD1	Q9NZU5	365 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	C5orf42	Q9H799	3197 aa		13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.57	□□□□□ -0.24
TMEM258-208	ENST00000545210	FOXP2	O15409	715 aa		13.56	□□□□□ -0.24
TMEM258-208	ENST00000545210	ZMYM1	Q5SVZ6	1142 aa		13.56	□□□□□ -0.24
TMEM258-208	ENST00000545210	GDF6	Q6KF10	455 aa	Predicted RBP	13.56	□□□□□ -0.24
TMEM258-208	ENST00000545210	BTNL9	Q6UXG8	535 aa		13.56	□□□□□ -0.24
TMEM258-208	ENST00000545210	AFAP1L1	Q8TED9	768 aa		13.56	□□□□□ -0.24
TMEM258-208	ENST00000545210	MPHOSPH6	Q99547	160 aa	Known RBP	13.56	□□□□□ -0.24
TMEM258-208	ENST00000545210	FSD1	Q9BTV5	496 aa		13.56	□□□□□ -0.24
TMEM258-208	ENST00000545210	UBE2Z	Q9H832	354 aa	Predicted RBP	13.56	□□□□□ -0.24
TMEM258-208	ENST00000545210	SUGCT	Q9HAC7	445 aa		13.56	□□□□□ -0.24
TMEM258-208	ENST00000545210	ATG2A	Q2TAZ0	1938 aa		13.56	□□□□□ -0.24
TMEM258-208	ENST00000545210	TRIO	O75962	3097 aa		13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	ARIH2	O95376	493 aa		13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	SELP	P16109	830 aa		13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	EDNRB	P24530	442 aa		13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	NOV	P48745	357 aa		13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	RPS6	P62753	249 aa	Known RBP	13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	TCTN1	Q2MV58	587 aa		13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	CNKSR3	Q6P9H4	555 aa		13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	LRRC8D	Q7L1W4	858 aa		13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	ALYREF	Q86V81	257 aa	Known RBP	13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	FAM178B	Q8IXR5	827 aa		13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	CAGE1	Q8TC20	777 aa		13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	DHX38	Q92620	1227 aa	Known RBP	13.55	□□□□□ -0.24
TMEM258-208	ENST00000545210	LINC01553	A4QN01	128 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	PRR33	A8MZF0	331 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	NBN	O60934	754 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	GJB5	O95377	273 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	KCNA5	P22460	613 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	ERVK-21	P61565	698 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	C20orf194	Q5TEA3	1177 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	FAM117B	Q6P1L5	589 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	GJD3	Q8N144	294 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	DNER	Q8NFT8	737 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	AFG1L	Q8WV93	481 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	TGS1	Q96RS0	853 aa	Known RBP	13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	RAD9A	Q99638	391 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	TMEM47	Q9BQJ4	181 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	DCTPP1	Q9H773	170 aa		13.54	□□□□□ -0.24
TMEM258-208	ENST00000545210	RALGAPA2	Q2PPJ7	1873 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	MMP3	P08254	477 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	TOP1	P11387	765 aa	Known RBP	13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	CKB	P12277	381 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	SSTR3	P32745	418 aa	Predicted RBP	13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	LY6K	Q17RY6	165 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	LEXM	Q3ZCV2	418 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	CHST3	Q7LGC8	479 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	SESTD1	Q86VW0	696 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	PI4K2B	Q8TCG2	481 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	KAT2B	Q92831	832 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	UIMC1	Q96RL1	719 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	TOMM22	Q9NS69	142 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	ANAPC4	Q9UJX5	808 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	TTC41P	Q6P2S7	1318 aa		13.53	□□□□□ -0.24
TMEM258-208	ENST00000545210	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.52	□□□□□ -0.25
TMEM258-208	ENST00000545210		B4DLN1	442 aa		13.52	□□□□□ -0.25
TMEM258-208	ENST00000545210	ORC4	O43929	436 aa		13.52	□□□□□ -0.25

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