RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 ADGRF4Q8IZF3 695 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 ZSCAN10Q96SZ4 725 aaPredicted RBP20.2■□□□□ 0.82
PDCD2-207ENST00000539212 NKX2-4Q9H2Z4 354 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 PRDM12Q9H4Q4 367 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 KAT14Q9H8E8 782 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 PRDM6Q9NQX0 595 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 POLR3EQ9NVU0 708 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 YBX2Q9Y2T7 364 aaKnown RBP20.2■□□□□ 0.82
PDCD2-207ENST00000539212 TNKSO95271 1327 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 RABGGTBP53611 331 aa20.19■□□□□ 0.82
PDCD2-207ENST00000539212 FAM47CQ5HY64 1035 aa20.19■□□□□ 0.82
PDCD2-207ENST00000539212 IQCA1Q86XH1 822 aa20.19■□□□□ 0.82
PDCD2-207ENST00000539212 MTG1Q9BT17 334 aaPredicted RBP20.19■□□□□ 0.82
PDCD2-207ENST00000539212 ZSWIM5Q9P217 1185 aa20.19■□□□□ 0.82
PDCD2-207ENST00000539212 TXNP10599 105 aaKnown RBP20.18■□□□□ 0.82
PDCD2-207ENST00000539212 PDE4AP27815 886 aa20.18■□□□□ 0.82
PDCD2-207ENST00000539212 QRICH1Q2TAL8 776 aa20.18■□□□□ 0.82
PDCD2-207ENST00000539212 NBPF20Q3BBV1 942 aa20.18■□□□□ 0.82
PDCD2-207ENST00000539212 DNERQ8NFT8 737 aa20.18■□□□□ 0.82
PDCD2-207ENST00000539212 SCFD2Q8WU76 684 aa20.18■□□□□ 0.82
PDCD2-207ENST00000539212 PPM1EQ8WY54 764 aa20.18■□□□□ 0.82
PDCD2-207ENST00000539212 TAAR1Q96RJ0 339 aa20.18■□□□□ 0.82
PDCD2-207ENST00000539212 DSCC1Q9BVC3 393 aa20.18■□□□□ 0.82
PDCD2-207ENST00000539212 VAT1LQ9HCJ6 419 aa20.18■□□□□ 0.82
PDCD2-207ENST00000539212 TET1Q8NFU7 2136 aa20.17■□□□□ 0.82
PDCD2-207ENST00000539212 DHX16O60231 1041 aaKnown RBP20.17■□□□□ 0.82
PDCD2-207ENST00000539212 MYOGP15173 224 aa20.17■□□□□ 0.82
PDCD2-207ENST00000539212 CHMP4BP1P59074 171 aa20.17■□□□□ 0.82
PDCD2-207ENST00000539212 IMMTQ16891 758 aaKnown RBP20.17■□□□□ 0.82
PDCD2-207ENST00000539212 DEFB128Q7Z7B8 93 aa20.17■□□□□ 0.82
PDCD2-207ENST00000539212 SYTL5Q8TDW5 730 aaPredicted RBP20.17■□□□□ 0.82
PDCD2-207ENST00000539212 ANKS1AQ92625 1134 aa20.17■□□□□ 0.82
PDCD2-207ENST00000539212 GPHNQ9NQX3 736 aaPredicted RBP20.17■□□□□ 0.82
PDCD2-207ENST00000539212 PNMA2Q9UL42 364 aa20.17■□□□□ 0.82
PDCD2-207ENST00000539212 ABCB11O95342 1321 aa20.17■□□□□ 0.82
PDCD2-207ENST00000539212 ZBBXA8MT70 800 aa20.16■□□□□ 0.82
PDCD2-207ENST00000539212 HIP1O00291 1037 aa20.16■□□□□ 0.82
PDCD2-207ENST00000539212 GSPT1P15170 499 aaKnown RBP20.16■□□□□ 0.82
PDCD2-207ENST00000539212 ADGRE1Q14246 886 aa20.16■□□□□ 0.82
PDCD2-207ENST00000539212 TTLL4Q14679 1199 aa20.16■□□□□ 0.82
PDCD2-207ENST00000539212 ASPRV1Q53RT3 343 aa20.16■□□□□ 0.82
PDCD2-207ENST00000539212 SEPT14Q6ZU15 432 aa20.16■□□□□ 0.82
PDCD2-207ENST00000539212 STAG2Q8N3U4 1231 aa20.16■□□□□ 0.82
PDCD2-207ENST00000539212 MPHOSPH6Q99547 160 aaKnown RBP20.16■□□□□ 0.82
PDCD2-207ENST00000539212 SEZ6LQ9BYH1 1024 aa20.16■□□□□ 0.82
PDCD2-207ENST00000539212 JMJD4Q9H9V9 463 aa20.16■□□□□ 0.82
PDCD2-207ENST00000539212 MSRAQ9UJ68 235 aa20.16■□□□□ 0.82
PDCD2-207ENST00000539212 A6NJR5 290 aa20.15■□□□□ 0.82
PDCD2-207ENST00000539212 NKRFO15226 690 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDCD2-207ENST00000539212 PARP1P09874 1014 aaKnown RBP20.15■□□□□ 0.82
PDCD2-207ENST00000539212 RAB30Q15771 203 aa20.15■□□□□ 0.82
PDCD2-207ENST00000539212 LY6KQ17RY6 165 aa20.15■□□□□ 0.82
PDCD2-207ENST00000539212 CYB5R4Q7L1T6 521 aa20.15■□□□□ 0.82
PDCD2-207ENST00000539212 RGS22Q8NE09 1264 aa20.15■□□□□ 0.82
PDCD2-207ENST00000539212 MTIF3Q9H2K0 278 aaKnown RBP20.15■□□□□ 0.82
PDCD2-207ENST00000539212 RAD50Q92878 1312 aa20.15■□□□□ 0.82
PDCD2-207ENST00000539212 BAZ2BQ9UIF8 2168 aaKnown RBP20.14■□□□□ 0.81
PDCD2-207ENST00000539212 DOCK5Q9H7D0 1870 aa20.14■□□□□ 0.81
PDCD2-207ENST00000539212 EIF2AK2P19525 551 aaKnown RBP20.14■□□□□ 0.81
PDCD2-207ENST00000539212 CCDC178Q5BJE1 867 aa20.14■□□□□ 0.81
PDCD2-207ENST00000539212 CCDC62Q6P9F0 684 aa20.14■□□□□ 0.81
PDCD2-207ENST00000539212 CHST3Q7LGC8 479 aa20.14■□□□□ 0.81
PDCD2-207ENST00000539212 AFG1LQ8WV93 481 aa20.14■□□□□ 0.81
PDCD2-207ENST00000539212 GAS2L1Q99501 681 aaPredicted RBP20.14■□□□□ 0.81
PDCD2-207ENST00000539212 UBAC1Q9BSL1 405 aa20.14■□□□□ 0.81
PDCD2-207ENST00000539212 MUC3AQ02505 3323 aa20.13■□□□□ 0.81
PDCD2-207ENST00000539212 OPLAHO14841 1288 aa20.13■□□□□ 0.81
PDCD2-207ENST00000539212 PPP1R11O60927 126 aaPredicted RBP20.13■□□□□ 0.81
PDCD2-207ENST00000539212 MMP3P08254 477 aa20.13■□□□□ 0.81
PDCD2-207ENST00000539212 ARHGAP1Q07960 439 aa20.13■□□□□ 0.81
PDCD2-207ENST00000539212 BRDTQ58F21 947 aaPredicted RBP20.13■□□□□ 0.81
PDCD2-207ENST00000539212 IFIT1BQ5T764 474 aaKnown RBP20.13■□□□□ 0.81
PDCD2-207ENST00000539212 FBXO11Q86XK2 927 aa20.13■□□□□ 0.81
PDCD2-207ENST00000539212 KRT23Q9C075 422 aa20.13■□□□□ 0.81
PDCD2-207ENST00000539212 CTNNA3Q9UI47 895 aa20.13■□□□□ 0.81
PDCD2-207ENST00000539212 SLC4A7Q9Y6M7 1214 aa20.13■□□□□ 0.81
PDCD2-207ENST00000539212 COL4A4P53420 1690 aaPredicted RBP20.13■□□□□ 0.81
PDCD2-207ENST00000539212 SUPT20HL2P0C7V6 817 aa20.12■□□□□ 0.81
PDCD2-207ENST00000539212 SEC23AQ15436 765 aa20.12■□□□□ 0.81
PDCD2-207ENST00000539212 CCDC85BQ15834 202 aaPredicted RBP20.12■□□□□ 0.81
PDCD2-207ENST00000539212 SLC35G1Q2M3R5 365 aa20.12■□□□□ 0.81
PDCD2-207ENST00000539212 TTC22Q5TAA0 569 aa20.12■□□□□ 0.81
PDCD2-207ENST00000539212 NFRKBQ6P4R8 1299 aa20.12■□□□□ 0.81
PDCD2-207ENST00000539212 RPUSD2Q8IZ73 545 aaKnown RBP20.12■□□□□ 0.81
PDCD2-207ENST00000539212 RMDN3Q96TC7 470 aa20.12■□□□□ 0.81
PDCD2-207ENST00000539212 TAF6LQ9Y6J9 622 aa20.12■□□□□ 0.81
PDCD2-207ENST00000539212 B4DLN1 442 aa20.11■□□□□ 0.81
PDCD2-207ENST00000539212 CFBP00751 764 aa20.11■□□□□ 0.81
PDCD2-207ENST00000539212 IGFBP4P22692 258 aa20.11■□□□□ 0.81
PDCD2-207ENST00000539212 NT5C2P49902 561 aa20.11■□□□□ 0.81
PDCD2-207ENST00000539212 MRPL12P52815 198 aaKnown RBP20.11■□□□□ 0.81
PDCD2-207ENST00000539212 IRX6P78412 446 aaPredicted RBP20.11■□□□□ 0.81
PDCD2-207ENST00000539212 NSUN6Q8TEA1 469 aaKnown RBP20.11■□□□□ 0.81
PDCD2-207ENST00000539212 CTAGE1Q96RT6 745 aa20.11■□□□□ 0.81
PDCD2-207ENST00000539212 CNNM2Q9H8M5 875 aa20.11■□□□□ 0.81
PDCD2-207ENST00000539212 SLC28A3Q9HAS3 691 aa20.11■□□□□ 0.81
PDCD2-207ENST00000539212 SENP2Q9HC62 589 aa20.11■□□□□ 0.81
PDCD2-207ENST00000539212 MRPL11Q9Y3B7 192 aaKnown RBP20.11■□□□□ 0.81
PDCD2-207ENST00000539212 XIRP2A4UGR9 3374 aa20.11■□□□□ 0.81
PDCD2-207ENST00000539212 TRANK1O15050 2925 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms