RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SESTD1Q86VW0 696 aa14.7□□□□□ -0.06
CAPN1-223ENST00000533079 DNERQ8NFT8 737 aa14.7□□□□□ -0.06
CAPN1-223ENST00000533079 GDPD5Q8WTR4 605 aa14.7□□□□□ -0.06
CAPN1-223ENST00000533079 DCAF4Q8WV16 495 aa14.7□□□□□ -0.06
CAPN1-223ENST00000533079 TGS1Q96RS0 853 aaKnown RBP14.7□□□□□ -0.06
CAPN1-223ENST00000533079 NAPBQ9H115 298 aa14.7□□□□□ -0.06
CAPN1-223ENST00000533079 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-223ENST00000533079 TSPY2A6NKD2 308 aa14.69□□□□□ -0.06
CAPN1-223ENST00000533079 B4DLN1 442 aa14.69□□□□□ -0.06
CAPN1-223ENST00000533079 EDNRBP24530 442 aa14.69□□□□□ -0.06
CAPN1-223ENST00000533079 MRPL12P52815 198 aaKnown RBP14.69□□□□□ -0.06
CAPN1-223ENST00000533079 ERVK-21P61565 698 aa14.69□□□□□ -0.06
CAPN1-223ENST00000533079 PDE4DQ08499 809 aa14.69□□□□□ -0.06
CAPN1-223ENST00000533079 BAATQ14032 418 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-223ENST00000533079 ERICH6BQ5W0A0 696 aa14.69□□□□□ -0.06
CAPN1-223ENST00000533079 BTNL9Q6UXG8 535 aa14.69□□□□□ -0.06
CAPN1-223ENST00000533079 FAM178BQ8IXR5 827 aa14.69□□□□□ -0.06
CAPN1-223ENST00000533079 GJD3Q8N144 294 aa14.69□□□□□ -0.06
CAPN1-223ENST00000533079 ZBED2Q9BTP6 218 aa14.69□□□□□ -0.06
CAPN1-223ENST00000533079 COL4A6Q14031 1691 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 ABHD14A-ACY1A0A1B0GW23 586 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 PTPDC1A2A3K4 754 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 LCHNA4D1U4 455 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 M0R2C6 588 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 NFIBO00712 420 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 GJB5O95377 273 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 CXCL10P02778 98 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 SELPP16109 830 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 NOVP48745 357 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 PTGISQ16647 500 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 LRRC8DQ7L1W4 858 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 ALYREFQ86V81 257 aaKnown RBP14.68□□□□□ -0.06
CAPN1-223ENST00000533079 PURBQ96QR8 312 aaKnown RBP14.68□□□□□ -0.06
CAPN1-223ENST00000533079 RAD9AQ99638 391 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 CD320Q9NPF0 282 aa14.68□□□□□ -0.06
CAPN1-223ENST00000533079 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.68□□□□□ -0.06
CAPN1-223ENST00000533079 CSPP1Q1MSJ5 1256 aa14.67□□□□□ -0.06
CAPN1-223ENST00000533079 CCDC96Q2M329 555 aa14.67□□□□□ -0.06
CAPN1-223ENST00000533079 SLC30A10Q6XR72 485 aa14.67□□□□□ -0.06
CAPN1-223ENST00000533079 RNF207Q6ZRF8 634 aa14.67□□□□□ -0.06
CAPN1-223ENST00000533079 MAF1Q9H063 256 aa14.67□□□□□ -0.06
CAPN1-223ENST00000533079 SUGCTQ9HAC7 445 aa14.67□□□□□ -0.06
CAPN1-223ENST00000533079 CTNNA3Q9UI47 895 aa14.67□□□□□ -0.06
CAPN1-223ENST00000533079 WDR19Q8NEZ3 1342 aa14.66□□□□□ -0.06
CAPN1-223ENST00000533079 LINC01553A4QN01 128 aa14.66□□□□□ -0.06
CAPN1-223ENST00000533079 SNAP25P60880 206 aa14.66□□□□□ -0.06
CAPN1-223ENST00000533079 SYDE2Q5VT97 1194 aa14.66□□□□□ -0.06
CAPN1-223ENST00000533079 SPRED2Q7Z698 418 aa14.66□□□□□ -0.06
CAPN1-223ENST00000533079 IL17RBQ9NRM6 502 aa14.66□□□□□ -0.06
CAPN1-223ENST00000533079 FAM50BQ9Y247 325 aa14.66□□□□□ -0.06
CAPN1-223ENST00000533079 NEFLP07196 543 aa14.65□□□□□ -0.06
CAPN1-223ENST00000533079 TXNP10599 105 aaKnown RBP14.65□□□□□ -0.06
CAPN1-223ENST00000533079 KCNA5P22460 613 aa14.65□□□□□ -0.06
CAPN1-223ENST00000533079 CALML3P27482 149 aa14.65□□□□□ -0.06
CAPN1-223ENST00000533079 SSTR3P32745 418 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-223ENST00000533079 MRE11P49959 708 aa14.65□□□□□ -0.06
CAPN1-223ENST00000533079 DEFB103AP81534 67 aa14.65□□□□□ -0.06
CAPN1-223ENST00000533079 TIGD5Q53EQ6 642 aa14.65□□□□□ -0.06
CAPN1-223ENST00000533079 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-223ENST00000533079 SAMD11Q96NU1 681 aa14.65□□□□□ -0.06
CAPN1-223ENST00000533079 CRBNQ96SW2 442 aa14.65□□□□□ -0.06
CAPN1-223ENST00000533079 KATNAL1Q9BW62 490 aa14.65□□□□□ -0.06
CAPN1-223ENST00000533079 PIEZO1Q92508 2521 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 MMP3P08254 477 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 RPS6P62753 249 aaKnown RBP14.64□□□□□ -0.07
CAPN1-223ENST00000533079 IKBKEQ14164 716 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 PTPROQ16827 1216 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 PTCRAQ6ISU1 281 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-223ENST00000533079 GDF6Q6KF10 455 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-223ENST00000533079 RASGRP2Q7LDG7 609 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 NEK9Q8TD19 979 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 CLEC4DQ8WXI8 215 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 CTAGE1Q96RT6 745 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 PRKAG3Q9UGI9 489 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 GTF2IRD1Q9UHL9 959 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 ANAPC4Q9UJX5 808 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 MTUS1Q9ULD2 1270 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 INSL6Q9Y581 213 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 TTC41PQ6P2S7 1318 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 EMSYQ7Z589 1322 aa14.64□□□□□ -0.07
CAPN1-223ENST00000533079 GRXCR2A6NFK2 248 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 DCXO43602 365 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 SMARCA5O60264 1052 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-223ENST00000533079 NBNO60934 754 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 GH1P01241 217 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 CKBP12277 381 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 IL9P15248 144 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 NHLH1Q02575 133 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 GPNMBQ14956 572 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 RGS22Q8NE09 1264 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 FBXO22Q8NEZ5 403 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 DHX38Q92620 1227 aaKnown RBP14.63□□□□□ -0.07
CAPN1-223ENST00000533079 COPS5Q92905 334 aa14.63□□□□□ -0.07
CAPN1-223ENST00000533079 MRPL38Q96DV4 380 aaKnown RBP14.63□□□□□ -0.07
CAPN1-223ENST00000533079 SUPT16HQ9Y5B9 1047 aaKnown RBP14.63□□□□□ -0.07
CAPN1-223ENST00000533079 WDFY4Q6ZS81 3184 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 ORC4O43929 436 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 RANBP6O60518 1105 aaKnown RBP14.62□□□□□ -0.07
CAPN1-223ENST00000533079 NMT2O60551 498 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 ARIH2O95376 493 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms