RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 NBNO60934 754 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 SELPP16109 830 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 GNAT2P19087 354 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 MCCP23508 829 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 BRDTQ58F21 947 aaPredicted RBP19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 FAM47CQ5HY64 1035 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 TRAF7Q6Q0C0 670 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 BTNL9Q6UXG8 535 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 NSMFQ6X4W1 530 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 KBTBD3Q8NAB2 608 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 SP7Q8TDD2 431 aaPredicted RBP19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 PRKAG3Q9UGI9 489 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 CCPG1Q9ULG6 757 aa19.29■□□□□ 0.68
CHMP4A-203ENST00000527154 RAD50Q92878 1312 aa19.28■□□□□ 0.68
CHMP4A-203ENST00000527154 TRIP12Q14669 1992 aaPredicted RBP19.28■□□□□ 0.68
CHMP4A-203ENST00000527154 GPAA1O43292 621 aa19.28■□□□□ 0.68
CHMP4A-203ENST00000527154 EFCAB14O75071 495 aa19.28■□□□□ 0.68
CHMP4A-203ENST00000527154 ZP2Q05996 745 aa19.28■□□□□ 0.68
CHMP4A-203ENST00000527154 KCTD1Q719H9 257 aa19.28■□□□□ 0.68
CHMP4A-203ENST00000527154 CCDC155Q8N6L0 562 aa19.28■□□□□ 0.68
CHMP4A-203ENST00000527154 PPP1R13LQ8WUF5 828 aa19.28■□□□□ 0.68
CHMP4A-203ENST00000527154 PATL2C9JE40 543 aaKnown RBP19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 NFIBO00712 420 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 HMMRO75330 724 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 TSPY3P0CV98 308 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 TSPY8P0CW00 308 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 SSTR3P32745 418 aaPredicted RBP19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 SNAP25P60880 206 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 HTRA4P83105 476 aaPredicted RBP19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 PPP2R5BQ15173 497 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 PTGISQ16647 500 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 PPP4R3BQ5MIZ7 849 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 LRRC8DQ7L1W4 858 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 RASGRP2Q7LDG7 609 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 IFNL3Q8IZI9 196 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 SCFD2Q8WU76 684 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 CLEC4DQ8WXI8 215 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 MRPL38Q96DV4 380 aaKnown RBP19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 IL17RBQ9NRM6 502 aa19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.27■□□□□ 0.68
CHMP4A-203ENST00000527154 COL4A6Q14031 1691 aa19.27■□□□□ 0.67
CHMP4A-203ENST00000527154 TFAP4Q01664 338 aa19.26■□□□□ 0.67
CHMP4A-203ENST00000527154 GDF6Q6KF10 455 aaPredicted RBP19.26■□□□□ 0.67
CHMP4A-203ENST00000527154 CCDC62Q6P9F0 684 aa19.26■□□□□ 0.67
CHMP4A-203ENST00000527154 KAT2BQ92831 832 aa19.26■□□□□ 0.67
CHMP4A-203ENST00000527154 COPS5Q92905 334 aa19.26■□□□□ 0.67
CHMP4A-203ENST00000527154 ZBED2Q9BTP6 218 aa19.26■□□□□ 0.67
CHMP4A-203ENST00000527154 ZBTB40Q9NUA8 1239 aa19.26■□□□□ 0.67
CHMP4A-203ENST00000527154 CCER2I3L3R5 266 aa19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 ARIH2O95376 493 aa19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 CKBP12277 381 aa19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 TDO2P48775 406 aa19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 PDE4BQ07343 736 aa19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 CSPP1Q1MSJ5 1256 aa19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 TRIM71Q2Q1W2 868 aaKnown RBP19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 SLC30A10Q6XR72 485 aa19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 DNERQ8NFT8 737 aa19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 PANK1Q8TE04 598 aa19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 PABPC5Q96DU9 382 aaKnown RBP19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 MTUS1Q9ULD2 1270 aa19.25■□□□□ 0.67
CHMP4A-203ENST00000527154 RNF113AO15541 343 aaKnown RBP19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 ZFYP08048 801 aaPredicted RBP19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 IKQ13123 557 aaPredicted RBP19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 MBTPS1Q14703 1052 aa19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 HFE2Q6ZVN8 426 aa19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 ADHFE1Q8IWW8 467 aa19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 UIMC1Q96RL1 719 aa19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 C17orf80Q9BSJ5 609 aa19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 GTF2IRD1Q9UHL9 959 aa19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 CTNNA3Q9UI47 895 aa19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 NOD1Q9Y239 953 aa19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 INSL6Q9Y581 213 aa19.24■□□□□ 0.67
CHMP4A-203ENST00000527154 CFAP54Q96N23 3096 aa19.23■□□□□ 0.67
CHMP4A-203ENST00000527154 M0R2C6 588 aa19.23■□□□□ 0.67
CHMP4A-203ENST00000527154 MMP3P08254 477 aa19.23■□□□□ 0.67
CHMP4A-203ENST00000527154 TIGD5Q53EQ6 642 aa19.23■□□□□ 0.67
CHMP4A-203ENST00000527154 FBXO22Q8NEZ5 403 aa19.23■□□□□ 0.67
CHMP4A-203ENST00000527154 DCAF4Q8WV16 495 aa19.23■□□□□ 0.67
CHMP4A-203ENST00000527154 C5orf42Q9H799 3197 aa19.22■□□□□ 0.67
CHMP4A-203ENST00000527154 TECTAO75443 2155 aa19.22■□□□□ 0.67
CHMP4A-203ENST00000527154 H3BQ06 376 aaPredicted RBP19.22■□□□□ 0.67
CHMP4A-203ENST00000527154 TXNP10599 105 aaKnown RBP19.22■□□□□ 0.67
CHMP4A-203ENST00000527154 RPS6P62753 249 aaKnown RBP19.22■□□□□ 0.67
CHMP4A-203ENST00000527154 PPARAQ07869 468 aa19.22■□□□□ 0.67
CHMP4A-203ENST00000527154 IKBKEQ14164 716 aa19.22■□□□□ 0.67
CHMP4A-203ENST00000527154 SAMD11Q96NU1 681 aa19.22■□□□□ 0.67
CHMP4A-203ENST00000527154 ECHDC1Q9NTX5 307 aa19.22■□□□□ 0.67
CHMP4A-203ENST00000527154 STX8Q9UNK0 236 aa19.22■□□□□ 0.67
CHMP4A-203ENST00000527154 HAS3O00219 553 aa19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 LTBRP36941 435 aa19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 ARHGAP1Q07960 439 aa19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 CTC1Q2NKJ3 1217 aa19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 HERC4Q5GLZ8 1057 aaPredicted RBP19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 TTBK2Q6IQ55 1244 aa19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 BMP8AQ7Z5Y6 402 aa19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 ANKS1AQ92625 1134 aa19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 MAF1Q9H063 256 aa19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 PNMA2Q9UL42 364 aa19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 WDR19Q8NEZ3 1342 aa19.21■□□□□ 0.67
CHMP4A-203ENST00000527154 PTPDC1A2A3K4 754 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms