RNA–Protein interactions for RNA: ENST00000523627.1

AC055854.1-201, humanhuman

TSL 4 BASIC

Gene AC055854.1, Length 570 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-201ENST00000523627 SNHG28P0DPA3 235 aa18.72■□□□□ 0.59
AC055854.1-201ENST00000523627 TOP1P11387 765 aaKnown RBP18.72■□□□□ 0.59
AC055854.1-201ENST00000523627 MX1P20591 662 aa18.72■□□□□ 0.59
AC055854.1-201ENST00000523627 RFC2P35250 354 aa18.72■□□□□ 0.59
AC055854.1-201ENST00000523627 TCTN1Q2MV58 587 aa18.72■□□□□ 0.59
AC055854.1-201ENST00000523627 FAM47CQ5HY64 1035 aa18.72■□□□□ 0.59
AC055854.1-201ENST00000523627 CCDC62Q6P9F0 684 aa18.72■□□□□ 0.59
AC055854.1-201ENST00000523627 RNF207Q6ZRF8 634 aa18.72■□□□□ 0.59
AC055854.1-201ENST00000523627 KHSRPQ92945 711 aaKnown RBP eCLIP18.72■□□□□ 0.59
AC055854.1-201ENST00000523627 TCP11L1Q9NUJ3 509 aa18.72■□□□□ 0.59
AC055854.1-201ENST00000523627 FGAP02671 866 aa18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 ZNF543Q08ER8 600 aa18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 GRB10Q13322 594 aa18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 PPP2R5BQ15173 497 aa18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 TMCO2Q7Z6W1 182 aaPredicted RBP18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 ARNTL2Q8WYA1 636 aa18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 DHX38Q92620 1227 aaKnown RBP18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 FAM227BQ96M60 508 aa18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 TSPYL2Q9H2G4 693 aaPredicted RBP18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 EPHX3Q9H6B9 360 aa18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 WDR19Q8NEZ3 1342 aa18.71■□□□□ 0.59
AC055854.1-201ENST00000523627 NKRFO15226 690 aaKnown RBP eCLIP18.7■□□□□ 0.58
AC055854.1-201ENST00000523627 PTPN11Q06124 597 aaPredicted RBP18.7■□□□□ 0.58
AC055854.1-201ENST00000523627 IL27Q8NEV9 243 aa18.7■□□□□ 0.58
AC055854.1-201ENST00000523627 SCFD2Q8WU76 684 aa18.7■□□□□ 0.58
AC055854.1-201ENST00000523627 TBC1D5Q92609 795 aa18.7■□□□□ 0.58
AC055854.1-201ENST00000523627 KAT2BQ92831 832 aa18.7■□□□□ 0.58
AC055854.1-201ENST00000523627 CPVLQ9H3G5 476 aa18.7■□□□□ 0.58
AC055854.1-201ENST00000523627 TRIP12Q14669 1992 aaPredicted RBP18.7■□□□□ 0.58
AC055854.1-201ENST00000523627 A0A0D9SFI3 127 aa18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 TXNP10599 105 aaKnown RBP18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 ACTN1P12814 892 aa18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 PDE4DQ08499 809 aa18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 SKIV2LQ15477 1246 aaKnown RBP18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 GDF6Q6KF10 455 aaPredicted RBP18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 ZNF589Q86UQ0 364 aaPredicted RBP18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 DNERQ8NFT8 737 aa18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 C11orf16Q9NQ32 467 aa18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 GPHNQ9NQX3 736 aaPredicted RBP18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 COL20A1Q9P218 1284 aa18.69■□□□□ 0.58
AC055854.1-201ENST00000523627 KPNA6O60684 536 aa18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 WDR5P61964 334 aaKnown RBP18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 ARHGAP1Q07960 439 aa18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 AAK1Q2M2I8 961 aa18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 RRP12Q5JTH9 1297 aaKnown RBP18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 SESTD1Q86VW0 696 aa18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 TBC1D10CQ8IV04 446 aa18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 AFG1LQ8WV93 481 aa18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 C1QTNF1Q9BXJ1 281 aa18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 HELLSQ9NRZ9 838 aa18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 COG5Q9UP83 839 aa18.68■□□□□ 0.58
AC055854.1-201ENST00000523627 GTPBP6O43824 516 aaPredicted RBP18.67■□□□□ 0.58
AC055854.1-201ENST00000523627 BAIAP3O94812 1187 aa18.67■□□□□ 0.58
AC055854.1-201ENST00000523627 DEFB103AP81534 67 aa18.67■□□□□ 0.58
AC055854.1-201ENST00000523627 TRAF7Q6Q0C0 670 aa18.67■□□□□ 0.58
AC055854.1-201ENST00000523627 RETREG2Q8NC44 543 aa18.67■□□□□ 0.58
AC055854.1-201ENST00000523627 LRFN3Q9BTN0 628 aa18.67■□□□□ 0.58
AC055854.1-201ENST00000523627 FTOQ9C0B1 505 aaKnown RBP eCLIP18.67■□□□□ 0.58
AC055854.1-201ENST00000523627 CD320Q9NPF0 282 aa18.67■□□□□ 0.58
AC055854.1-201ENST00000523627 ZMYM6O95789 1325 aa18.67■□□□□ 0.58
AC055854.1-201ENST00000523627 BRWD1Q9NSI6 2320 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 NBNO60934 754 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 CXCL10P02778 98 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 MMP3P08254 477 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 GOLGA8HP0CJ92 632 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 HSPD1P10809 573 aaKnown RBP18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 HAND2P61296 217 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 RBL2Q08999 1139 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 BFSP2Q13515 415 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 PTGISQ16647 500 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 RGS22Q8NE09 1264 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 WNT8BQ93098 351 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 EVI5LQ96CN4 794 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 TAAR1Q96RJ0 339 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 TOMM22Q9NS69 142 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 RAD50Q92878 1312 aa18.66■□□□□ 0.58
AC055854.1-201ENST00000523627 HOXD11P31277 338 aaPredicted RBP18.65■□□□□ 0.58
AC055854.1-201ENST00000523627 LY6KQ17RY6 165 aa18.65■□□□□ 0.58
AC055854.1-201ENST00000523627 BRDTQ58F21 947 aaPredicted RBP18.65■□□□□ 0.58
AC055854.1-201ENST00000523627 SYTL5Q8TDW5 730 aaPredicted RBP18.65■□□□□ 0.58
AC055854.1-201ENST00000523627 AFAP1L1Q8TED9 768 aa18.65■□□□□ 0.58
AC055854.1-201ENST00000523627 FAM122AQ96E09 287 aa18.65■□□□□ 0.58
AC055854.1-201ENST00000523627 TTC14Q96N46 770 aa18.65■□□□□ 0.58
AC055854.1-201ENST00000523627 UBA5Q9GZZ9 404 aa18.65■□□□□ 0.58
AC055854.1-201ENST00000523627 PDE1AP54750 535 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 HIC1Q14526 733 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 MBTPS1Q14703 1052 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 TRIM71Q2Q1W2 868 aaKnown RBP18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 USH1GQ495M9 461 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 MCMDC2Q4G0Z9 681 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 LRRC8DQ7L1W4 858 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 CAGE1Q8TC20 777 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 GDPD5Q8WTR4 605 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 HLA-CQ95604 372 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 SUGCTQ9HAC7 445 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 NEDD4P46934 1319 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 KIAA1217Q5T5P2 1943 aa18.64■□□□□ 0.57
AC055854.1-201ENST00000523627 SELPP16109 830 aa18.63■□□□□ 0.57
AC055854.1-201ENST00000523627 CHMP4BP1P59074 171 aa18.63■□□□□ 0.57
AC055854.1-201ENST00000523627 NMIQ13287 307 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms