RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 MRPL11Q9Y3B7 192 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 CUL9Q8IWT3 2517 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 LRRC37A2A6NM11 1700 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 LCTP09848 1927 aa13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 UMODL1Q5DID0 1318 aa13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 RAD50Q92878 1312 aa13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 A6NJR5 290 aa13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 SUPT20HL2P0C7V6 817 aa13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 GSPT1P15170 499 aaKnown RBP13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 CCL23P55773 120 aa13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 TTLL4Q14679 1199 aa13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 MAFAQ8NHW3 353 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 HERVK_113Q902F9 699 aa13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 TAAR1Q96RJ0 339 aa13.72□□□□□ -0.21
CTNNA1-237ENST00000523275 GRXCR1A8MXD5 290 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 FOSL2P15408 326 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 CHMLP26374 656 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 TRDNQ13061 729 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 GRIN2CQ14957 1233 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 SEC23AQ15436 765 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 NBPF20Q3BBV1 942 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 CYB5R4Q7L1T6 521 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 RPUSD2Q8IZ73 545 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 COPS5Q92905 334 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 TIFAQ96CG3 184 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 IWS1Q96ST2 819 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 RMDN3Q96TC7 470 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 MTIF3Q9H2K0 278 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 ZNF576Q9H609 170 aa13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 TRMT13Q9NUP7 481 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 LAMA2P24043 3122 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-237ENST00000523275 KLRF2D3W0D1 207 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 STXBP2Q15833 593 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 FAM47CQ5HY64 1035 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 NFRKBQ6P4R8 1299 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 CCDC62Q6P9F0 684 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 SEPT14Q6ZU15 432 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 OTOP2Q7RTS6 562 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 STAG2Q8N3U4 1231 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 AMNQ9BXJ7 453 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 PBX4Q9BYU1 374 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 WNT8AQ9H1J5 351 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 COL20A1Q9P218 1284 aa13.7□□□□□ -0.22
CTNNA1-237ENST00000523275 LAMA4Q16363 1823 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 A0A0C4DFX4 3053 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 PALM3A6NDB9 673 aaPredicted RBP13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 ARIH2O95376 493 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 CFBP00751 764 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 CYP2C9P11712 490 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 PBX2P40425 430 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 PTH1RQ03431 593 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 PTPN11Q06124 597 aaPredicted RBP13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 RAB30Q15771 203 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 ARHGEF16Q5VV41 709 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 SCLYQ96I15 445 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 CXXC1Q9P0U4 656 aaPredicted RBP13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 MAD2L2Q9UI95 211 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 MSRAQ9UJ68 235 aa13.69□□□□□ -0.22
CTNNA1-237ENST00000523275 IFIT3O14879 490 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 ZBTB5O15062 677 aa13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 EIF3JO75822 258 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 GH1P01241 217 aa13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 CYP21A2P08686 494 aa13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 IRX6P78412 446 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 LY6KQ17RY6 165 aa13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 AFG1LQ8WV93 481 aa13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 MTMR8Q96EF0 704 aa13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 MAP3K20Q9NYL2 800 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 PCDHA1Q9Y5I3 950 aa13.68□□□□□ -0.22
CTNNA1-237ENST00000523275 ERICH2A1L162 156 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 OPLAHO14841 1288 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 PPP1R11O60927 126 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 NR3C2P08235 984 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 PFKMP08237 780 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 EIF2AK2P19525 551 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 HSD17B4P51659 736 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 CHMP4BP1P59074 171 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 GHRHRQ02643 423 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 ARHGAP1Q07960 439 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 TRAF1Q13077 416 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 GRM4Q14833 912 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 CHST3Q7LGC8 479 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 RALYLQ86SE5 291 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 NCOA7Q8NI08 942 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 PPP1R13LQ8WUF5 828 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 VWCEQ96DN2 955 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 PXMP2Q9NR77 195 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 DDX41Q9UJV9 622 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 SLC4A7Q9Y6M7 1214 aa13.67□□□□□ -0.22
CTNNA1-237ENST00000523275 E7EWF7 191 aa13.66□□□□□ -0.22
CTNNA1-237ENST00000523275 SGSM2O43147 1006 aa13.66□□□□□ -0.22
CTNNA1-237ENST00000523275 MMP3P08254 477 aa13.66□□□□□ -0.22
CTNNA1-237ENST00000523275 SART3Q15020 963 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-237ENST00000523275 STOX1Q6ZVD7 989 aa13.66□□□□□ -0.22
CTNNA1-237ENST00000523275 SAMD3Q8N6K7 520 aa13.66□□□□□ -0.22
CTNNA1-237ENST00000523275 COL25A1Q9BXS0 654 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms