RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 KRT15P19012 456 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 SPATA1Q5VX52 437 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 GSDMAQ96QA5 445 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 MAGI3Q5TCQ9 1506 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 SPDYE16A6NNV3 312 aaPredicted RBP17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 PRKAB2O43741 272 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 CUL4BQ13620 913 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 LONRF3Q496Y0 759 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 ZNF341Q9BYN7 854 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 XPO4Q9C0E2 1151 aaKnown RBP17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 STK17AQ9UEE5 414 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 PCDHA7Q9UN72 937 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 CARMIL3Q8ND23 1372 aa17.77■□□□□ 0.44
PCDHA3-201ENST00000522353 CDK8P49336 464 aa17.77■□□□□ 0.44
PCDHA3-201ENST00000522353 PSMB7Q99436 277 aa17.77■□□□□ 0.44
PCDHA3-201ENST00000522353 TTC37Q6PGP7 1564 aa17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 A0A1W2PQ27 194 aa17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 A0A1W2PQ64 194 aa17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 A0A1W2PQD8 194 aa17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 POLR2FP61218 127 aaKnown RBP17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 PPP2R5CQ13362 524 aa17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 CACYBPQ9HB71 228 aaKnown RBP17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 RGS12O14924 1447 aa17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 I3L4J1 428 aa17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 ZNF853P0CG23 659 aa17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 U2AF2P26368 475 aaKnown RBP eCLIP17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 STMN2Q93045 179 aa17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 SNX25Q9H3E2 840 aa17.77■□□□□ 0.43
PCDHA3-201ENST00000522353 SLC39A14Q15043 492 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 CDC37Q16543 378 aaPredicted RBP17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 DGKHQ86XP1 1220 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 NLRP7Q8WX94 980 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 VPS37BQ9H9H4 285 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 PLEKHG2Q9H7P9 1386 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 IFNAR1P17181 557 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 PSMC2P35998 433 aaKnown RBP17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 MYL7Q01449 175 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 ITKQ08881 620 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 MKRN3Q13064 507 aaKnown RBP17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 PPP1R2P3Q6NXS1 205 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 HOXC10Q9NYD6 342 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 PPP6R2O75170 966 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 PDXDC2PQ6P474 469 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 PI16Q6UXB8 463 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 CEP57Q86XR8 500 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 CTAGE3PQ8IX95 158 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 GJD4Q96KN9 370 aaPredicted RBP17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 MAN1A1P33908 653 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 CRKP46108 304 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 USP17L2Q6R6M4 530 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 EEPD1Q7L9B9 569 aa17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 BZW2Q9Y6E2 419 aaKnown RBP17.76■□□□□ 0.43
PCDHA3-201ENST00000522353 A6NJR5 290 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 GOLGA8CPA6NN73 597 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 CLIC6Q96NY7 704 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 BRIP1Q9BX63 1249 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 CCDC68Q9H2F9 335 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 COL15A1P39059 1388 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 PNMA6FA0A0J9YX94 578 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 NDUFAB1O14561 156 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 ZBTB7AO95365 584 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 TBC1D8O95759 1140 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 MYL1P05976 194 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 NR2F2P24468 414 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 HOXA7P31268 230 aaPredicted RBP17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 OSBP2Q969R2 916 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 DYNLL2Q96FJ2 89 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 ABCC12Q96J65 1359 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 PUS7LQ9H0K6 701 aaKnown RBP17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 CCDC160A6NGH7 325 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 LIFRP42702 1097 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 TACC3Q9Y6A5 838 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 ZNF233A6NK53 670 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 SDCCAG8Q86SQ7 713 aaPredicted RBP17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 PALM2Q8IXS6 379 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 COA7Q96BR5 231 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 PLCB1Q9NQ66 1216 aa17.75■□□□□ 0.43
PCDHA3-201ENST00000522353 PRPF3O43395 683 aaKnown RBP17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 XPAP23025 273 aaPredicted RBP17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 SURF1Q15526 300 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 APOBEC3FQ8IUX4 373 aaKnown RBP17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 NME8Q8N427 588 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 RASGRP4Q8TDF6 673 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 TRIM11Q96F44 468 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 NOL3O60936 208 aaKnown RBP17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 GH2P01242 217 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 DHTKD1Q96HY7 919 aaPredicted RBP17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 SAR1BQ9Y6B6 198 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 RINT1Q6NUQ1 792 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 GPATCH11Q8N954 259 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 SLC12A6Q9UHW9 1150 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 PCDHB4Q9Y5E5 795 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 PHBP35232 272 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 ZNF827Q17R98 1081 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 TBC1D10BQ4KMP7 808 aaPredicted RBP17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 RNF207Q6ZRF8 634 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 FAM149B1Q96BN6 582 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 ARHGAP31Q2M1Z3 1444 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms