RNA–Protein interactions for RNA: ENST00000520109.1

TNFRSF10B-206, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 674 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-206ENST00000520109 EIF3JO75822 258 aaKnown RBP22.27■■□□□ 1.16
TNFRSF10B-206ENST00000520109 CFBP00751 764 aa22.27■■□□□ 1.16
TNFRSF10B-206ENST00000520109 NFRKBQ6P4R8 1299 aa22.27■■□□□ 1.16
TNFRSF10B-206ENST00000520109 SYTL5Q8TDW5 730 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF10B-206ENST00000520109 FAM161BQ96MY7 647 aa22.27■■□□□ 1.16
TNFRSF10B-206ENST00000520109 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.27■■□□□ 1.165e-11■■■□□ 14.7
TNFRSF10B-206ENST00000520109 CPVLQ9H3G5 476 aa22.27■■□□□ 1.16
TNFRSF10B-206ENST00000520109 SEMA6BQ9H3T3 888 aa22.27■■□□□ 1.16
TNFRSF10B-206ENST00000520109 NOD1Q9Y239 953 aa22.27■■□□□ 1.16
TNFRSF10B-206ENST00000520109 PCDHA1Q9Y5I3 950 aa22.27■■□□□ 1.16
TNFRSF10B-206ENST00000520109 B4GALT4O60513 344 aa22.26■■□□□ 1.15
TNFRSF10B-206ENST00000520109 GH1P01241 217 aa22.26■■□□□ 1.15
TNFRSF10B-206ENST00000520109 FGBP02675 491 aa22.26■■□□□ 1.15
TNFRSF10B-206ENST00000520109 EPHB4P54760 987 aa22.26■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CASC1Q6TDU7 716 aa22.26■■□□□ 1.15
TNFRSF10B-206ENST00000520109 TMTC2Q8N394 836 aa22.26■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CCDC155Q8N6L0 562 aa22.26■■□□□ 1.15
TNFRSF10B-206ENST00000520109 DDX49Q9Y6V7 483 aaKnown RBP22.26■■□□□ 1.15
TNFRSF10B-206ENST00000520109 PALM3A6NDB9 673 aaPredicted RBP22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 E7EWF7 191 aa22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CASTP20810 708 aaKnown RBP22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 KIF5BP33176 963 aa22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 PSMC6P62333 389 aa22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 IRX6P78412 446 aaPredicted RBP22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 RAB30Q15771 203 aa22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 FAM47CQ5HY64 1035 aa22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 TMEM240Q5SV17 173 aa22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 GUCD1Q96NT3 240 aa22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 KATNAL1Q9BW62 490 aa22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 MAD2L2Q9UI95 211 aa22.25■■□□□ 1.15
TNFRSF10B-206ENST00000520109 LCTP09848 1927 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 DNAJB2P25686 324 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CYP2C18P33260 490 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 HSD17B4P51659 736 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 GRM4Q14833 912 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 TMEM67Q5HYA8 995 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 SEPT14Q6ZU15 432 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 ZNF365Q70YC5 407 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CYB5R4Q7L1T6 521 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 RETREG2Q8NC44 543 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CTCFLQ8NI51 663 aaPredicted RBP22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 MAP4K1Q92918 833 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 TAAR1Q96RJ0 339 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 MAP3K14Q99558 947 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CDX2Q99626 313 aaPredicted RBP22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 NOC4LQ9BVI4 516 aaKnown RBP22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 IL25Q9H293 177 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 MSRAQ9UJ68 235 aa22.24■■□□□ 1.15
TNFRSF10B-206ENST00000520109 ACTN1P12814 892 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 RFC2P35250 354 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 GHRHRQ02643 423 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 PTH1RQ03431 593 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 BFSP2Q13515 415 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 DGKDQ16760 1214 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 HOMER1Q86YM7 354 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 STAG2Q8N3U4 1231 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 HERVK_113Q902F9 699 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 TIFAQ96CG3 184 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 MTMR8Q96EF0 704 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 LZTS2Q9BRK4 669 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 TRPV6Q9H1D0 765 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 PXMP2Q9NR77 195 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 MRVI1Q9Y6F6 885 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 GRIN2DO15399 1336 aa22.23■■□□□ 1.15
TNFRSF10B-206ENST00000520109 PNMA6FA0A0J9YX94 578 aa22.22■■□□□ 1.15
TNFRSF10B-206ENST00000520109 GCOM1H8Y6P7 765 aaPredicted RBP22.22■■□□□ 1.15
TNFRSF10B-206ENST00000520109 NR3C2P08235 984 aa22.22■■□□□ 1.15
TNFRSF10B-206ENST00000520109 POLR2MP0CAP2 368 aa22.22■■□□□ 1.15
TNFRSF10B-206ENST00000520109 EIF2AK2P19525 551 aaKnown RBP22.22■■□□□ 1.15
TNFRSF10B-206ENST00000520109 GNAQP50148 359 aa22.22■■□□□ 1.15
TNFRSF10B-206ENST00000520109 LAMC2Q13753 1193 aa22.22■■□□□ 1.15
TNFRSF10B-206ENST00000520109 RIOX1Q9H6W3 641 aa22.22■■□□□ 1.15
TNFRSF10B-206ENST00000520109 PITPNM1O00562 1244 aa22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 DDAH1O94760 285 aa22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CALM1P0DP23 149 aa22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CALM2P0DP24 149 aa22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CALM3P0DP25 149 aa22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 FOSL2P15408 326 aa22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 NBPF20Q3BBV1 942 aa22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 RASIP1Q5U651 963 aa22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 RNF20Q5VTR2 975 aa22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 CCDC62Q6P9F0 684 aa22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 EMID1Q96A84 441 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 SEC63Q9UGP8 760 aaKnown RBP22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 RBM8AQ9Y5S9 174 aaKnown RBP22.21■■□□□ 1.15
TNFRSF10B-206ENST00000520109 STAM2O75886 525 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 PARNO95453 639 aaKnown RBP22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 ACRP10323 421 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 TGFB3P10600 412 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 SMARCA1P28370 1054 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 MCM5P33992 734 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 CCL23P55773 120 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 TROAPQ12815 778 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 GNPTABQ3T906 1256 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 TMEM63BQ5T3F8 832 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 STOX1Q6ZVD7 989 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 TMEM87BQ96K49 555 aa22.2■■□□□ 1.14
TNFRSF10B-206ENST00000520109 CCDC69A6NI79 296 aa22.19■■□□□ 1.14
TNFRSF10B-206ENST00000520109 MMP3P08254 477 aa22.19■■□□□ 1.14
TNFRSF10B-206ENST00000520109 CCND2P30279 289 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms