RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 USP33Q8TEY7 942 aa4.12□□□□□ -1.75
SNORA40.14-201ENST00000516543 SHDQ96IW2 340 aa4.12□□□□□ -1.75
SNORA40.14-201ENST00000516543 GORASP1Q9BQQ3 440 aa4.12□□□□□ -1.75
SNORA40.14-201ENST00000516543 LNPKQ9C0E8 428 aa4.12□□□□□ -1.75
SNORA40.14-201ENST00000516543 GBP3Q9H0R5 595 aa4.12□□□□□ -1.75
SNORA40.14-201ENST00000516543 BCL11AQ9H165 835 aa4.12□□□□□ -1.75
SNORA40.14-201ENST00000516543 PHAXQ9H814 394 aaKnown RBP4.12□□□□□ -1.75
SNORA40.14-201ENST00000516543 K7ESM1 405 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 ARNTLO00327 626 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 SGSM2O43147 1006 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 KCNH1O95259 989 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 PLS3P13797 630 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 NASPP49321 788 aaPredicted RBP4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 SARSP49591 514 aaKnown RBP4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 SCRN1Q12765 414 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 PUM1Q14671 1186 aaKnown RBP eCLIP4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 TEX2Q8IWB9 1127 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 ZNF654Q8IZM8 581 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 C19orf47Q8N9M1 422 aaKnown RBP4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 CPA5Q8WXQ8 436 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 GPRASP2Q96D09 838 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 PEX11GQ96HA9 241 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 RCC1LQ96I51 464 aaKnown RBP4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 RBM15Q96T37 977 aaKnown RBP eCLIP4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 TMPRSS5Q9H3S3 457 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 MARCH2Q9P0N8 246 aa4.11□□□□□ -1.75
SNORA40.14-201ENST00000516543 THBDP07204 575 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 GJA9P57773 515 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 TRIM26Q12899 539 aaPredicted RBP4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 GRB10Q13322 594 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 COL9A2Q14055 689 aaPredicted RBP4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 SLC9A5Q14940 896 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 TMCO4Q5TGY1 634 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 VHLLQ6RSH7 139 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 LINC00482Q8N8I6 264 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 RASGRP4Q8TDF6 673 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 ADAMTS17Q8TE56 1095 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 COPS5Q92905 334 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 BTG4Q9NY30 223 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 NTMQ9P121 344 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 NUDT5Q9UKK9 219 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 AKT3Q9Y243 479 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 SLC12A7Q9Y666 1083 aa4.1□□□□□ -1.75
SNORA40.14-201ENST00000516543 SCAMP3O14828 347 aaKnown RBP4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 NPHS1O60500 1241 aa4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 ZBTB7AO95365 584 aa4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 ITGB3P05106 788 aa4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 FPR2P25090 351 aa4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 MAGEA10P43363 369 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 ADAM17P78536 824 aa4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 HDLBPQ00341 1268 aaKnown RBP4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 GPR20Q99678 358 aa4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 C11orf84Q9BUA3 381 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 TMEFF2Q9UIK5 374 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 EMC9Q9Y3B6 208 aa4.09□□□□□ -1.75
SNORA40.14-201ENST00000516543 ANKRD34BA5PLL1 514 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 TBX1O43435 398 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 SMARCA5O60264 1052 aaPredicted RBP4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 CYP2C8P10632 490 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 THBS2P35442 1172 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 STAT5AP42229 794 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 GJA8P48165 433 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 MFAP1P55081 439 aaKnown RBP4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 ZNF827Q17R98 1081 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 RGL3Q3MIN7 710 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 TBC1D10BQ4KMP7 808 aaPredicted RBP4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 MCTP2Q6DN12 878 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 GTF2IRD2BQ6EKJ0 949 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 CD300LDQ6UXZ3 194 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 TTLL7Q6ZT98 887 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 GTF2IRD2Q86UP8 949 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 NT5DC4Q86YG4 428 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 CCDC103Q8IW40 242 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 BVESQ8NE79 360 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 OR6P1Q8NGX9 317 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 FRS2Q8WU20 508 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 MMP19Q99542 508 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 FBXL7Q9UJT9 491 aa4.08□□□□□ -1.76
SNORA40.14-201ENST00000516543 C22orf46C9J442 243 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 CASP7P55210 303 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 ITGA1P56199 1179 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 SF1Q15637 639 aaKnown RBP4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 ETV3LQ6ZN32 361 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 NLRP10Q86W26 655 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 MIB1Q86YT6 1006 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 NPLOC4Q8TAT6 608 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 CPLX3Q8WVH0 158 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 PPP1R14AQ96A00 147 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 MRGPRX3Q96LB0 322 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 ACBD3Q9H3P7 528 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 SMPD4Q9NXE4 827 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 PALD1Q9ULE6 856 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 INVSQ9Y283 1065 aa4.07□□□□□ -1.76
SNORA40.14-201ENST00000516543 TRBV23OR9-2A0A075B6M9 112 aa4.06□□□□□ -1.76
SNORA40.14-201ENST00000516543 DDX3XO00571 662 aaKnown RBP eCLIP4.06□□□□□ -1.76
SNORA40.14-201ENST00000516543 RPL13P26373 211 aaKnown RBP4.06□□□□□ -1.76
SNORA40.14-201ENST00000516543 BCL6P41182 706 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms