RNA–Protein interactions for RNA: ENST00000511071.5

ZFYVE28-208, Transcript of zinc finger FYVE-type containing 28, human

APPRIS ALT2 TSL 5 BASIC

Gene ZFYVE28, Length 3,273 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZFYVE28-208	ENST00000511071	SALL4	Q9UJQ4	1053 aa		18.82	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	CXCR5	P32302	372 aa		18.82	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	CCDC181	Q5TID7	509 aa		18.82	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	HEATR3	Q7Z4Q2	680 aa		18.82	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	CCDC84	Q86UT8	332 aa	Predicted RBP	18.82	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	ARL8A	Q96BM9	186 aa		18.82	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	TLR10	Q9BXR5	811 aa		18.82	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	DEF6	Q9H4E7	631 aa		18.82	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	TAF1	P21675	1872 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	DOT1L	Q8TEK3	1739 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	KAT6B	Q8WYB5	2073 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MYH10	P35580	1976 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	HSF2BP	O75031	334 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	ERLIN2	O94905	339 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	GUCY2C	P25092	1073 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	BAP1	Q92560	729 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MMTAG2	Q9BU76	263 aa	Known RBP	18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	BTG4	Q9NY30	223 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	LRRC53	A6NM62	1247 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	CLSTN1	O94985	981 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	PAFAH1B1	P43034	410 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MATR3	P43243	847 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MAN2A1	Q16706	1144 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MMS22L	Q6ZRQ5	1243 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	ZMYND12	Q9H0C1	365 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	SMARCAL1	Q9NZC9	954 aa		18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	ATXN2	Q99700	1313 aa	Known RBP	18.81	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	AKR1B10	O60218	316 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MRPS25	P82663	173 aa	Known RBP	18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	SF3B3	Q15393	1217 aa	Known RBP	18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	C8orf74	Q6P047	294 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	HPS3	Q969F9	1004 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	RBM12	Q9NTZ6	932 aa	Known RBP	18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	EHD2	Q9NZN4	543 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	KLHDC7A	Q5VTJ3	777 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	RNF10	Q8N5U6	811 aa	Known RBP	18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	GDF3	Q9NR23	364 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	SLAIN2	Q9P270	581 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	C3orf67	Q6ZVT6	689 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	ZIM3	Q96PE6	472 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	SLC39A2	Q9NP94	309 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	RNF14	Q9UBS8	474 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	TSKS	Q9UJT2	592 aa		18.8	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	NCK2	O43639	380 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MAGEA1	P43355	309 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	KRT25	Q7Z3Z0	450 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	KAT2B	Q92831	832 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MTMR8	Q96EF0	704 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	RUFY1	Q96T51	708 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	PSMB7	Q99436	277 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MCM9	Q9NXL9	1143 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	SSU72P8	A0A1W2PR75	194 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	PALM3	A6NDB9	673 aa	Predicted RBP	18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	RBAK-RBAKDN	I3L0D1	243 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	CCNT1	O60563	726 aa	Known RBP	18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	USP17L8	P0C7I0	530 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	C12orf60	Q5U649	245 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	EMC10	Q5UCC4	262 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	RRAGA	Q7L523	313 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MMRN2	Q9H8L6	949 aa		18.79	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	KLRK1	P26718	216 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	PRDX5	P30044	214 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	NOX5	Q96PH1	765 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	EDEM3	Q9BZQ6	932 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	CCDC88A	Q3V6T2	1871 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	ROBO3	Q96MS0	1386 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	TEC	P42680	631 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	LIG3	P49916	1009 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	ARHGAP27	Q6ZUM4	889 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	IQCK	Q8N0W5	287 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MYH14	Q7Z406	1995 aa	Known RBP	18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	PVALEF	A0A1B0GWK0	134 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	FGFR1OP	O95684	399 aa	Known RBP	18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	APBA1	Q02410	837 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	NONO	Q15233	471 aa	Known RBP eCLIP	18.78	■□□□□ 0.6	1e-6	■■■■□ 22
ZFYVE28-208	ENST00000511071	LETM2	Q2VYF4	491 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	CFAP221	Q4G0U5	840 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	HGSNAT	Q68CP4	663 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	PDXDC1	Q6P996	788 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	POTED	Q86YR6	584 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	IFT20	Q8IY31	132 aa		18.78	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	ZEB2	O60315	1214 aa		18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	GFPT1	Q06210	699 aa	Predicted RBP	18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	ERFE	Q4G0M1	354 aa		18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	TTC19	Q6DKK2	380 aa	Predicted RBP	18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	UNC13D	Q70J99	1090 aa		18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	GUF1	Q8N442	669 aa	Known RBP	18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	GLI1	P08151	1106 aa		18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	ATP6V1A	P38606	617 aa		18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	LRRC63	Q05C16	580 aa		18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	MREG	Q8N565	214 aa		18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	CALML4	Q96GE6	196 aa		18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	LZTS2	Q9BRK4	669 aa		18.77	■□□□□ 0.6
ZFYVE28-208	ENST00000511071	RASSF7	Q02833	373 aa		18.76	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	ORC2	Q13416	577 aa	Predicted RBP	18.76	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	KDM7A	Q6ZMT4	941 aa		18.76	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	LRRC55	Q6ZSA7	311 aa		18.76	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	SV2B	Q7L1I2	683 aa		18.76	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	NEK8	Q86SG6	692 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms