RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 IKQ13123 557 aaPredicted RBP27.77■■■□□ 2.04
DHFR-203ENST00000505337 AP3B2Q13367 1082 aa27.77■■■□□ 2.04
DHFR-203ENST00000505337 PYCARDQ9ULZ3 195 aa27.77■■■□□ 2.04
DHFR-203ENST00000505337 USP17L15C9J2P7 530 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 USP17L13C9JLJ4 530 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 USP17L11C9JVI0 530 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 USP17L18D6R9N7 530 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 USP17L22D6RA61 530 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 USP17L17D6RBQ6 530 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 USP17L19D6RCP7 530 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 USP17L20D6RJB6 530 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 TECP42680 631 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 HUNKP57058 714 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 USP17L24Q0WX57 530 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 TNFAIP1Q13829 316 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 RASA3Q14644 834 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 USP17L6PQ6QN14 398 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 TRMT44Q8IYL2 757 aaKnown RBP27.76■■■□□ 2.03
DHFR-203ENST00000505337 RASSF8Q8NHQ8 419 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 CAPNS2Q96L46 248 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 NAP1L4Q99733 375 aaKnown RBP27.76■■■□□ 2.03
DHFR-203ENST00000505337 ANO3Q9BYT9 981 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 VCPKMTQ9H867 229 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.76■■■□□ 2.03
DHFR-203ENST00000505337 NFE2L3Q9Y4A8 694 aa27.76■■■□□ 2.03
DHFR-203ENST00000505337 PLCG1P19174 1290 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 SNAP25P60880 206 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 PAXIP1Q6ZW49 1069 aaPredicted RBP27.75■■■□□ 2.03
DHFR-203ENST00000505337 KIAA1524Q8TCG1 905 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 SH2D4AQ9H788 454 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 RMND1Q9NWS8 449 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 SYNRGQ9UMZ2 1314 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 PPP1R3GB7ZBB8 358 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 RPN1P04843 607 aaKnown RBP27.75■■■□□ 2.03
DHFR-203ENST00000505337 TXKP42681 527 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 MCTP2Q6DN12 878 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 CACTINQ8WUQ7 758 aaKnown RBP27.75■■■□□ 2.03
DHFR-203ENST00000505337 CRYGNQ8WXF5 182 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 IMPACTQ9P2X3 320 aa27.75■■■□□ 2.03
DHFR-203ENST00000505337 DDX25Q9UHL0 483 aaKnown RBP27.75■■■□□ 2.03
DHFR-203ENST00000505337 PHF20L1A8MW92 1017 aa27.74■■■□□ 2.03
DHFR-203ENST00000505337 ASNSP08243 561 aa27.74■■■□□ 2.03
DHFR-203ENST00000505337 LRMPQ12912 555 aa27.74■■■□□ 2.03
DHFR-203ENST00000505337 TMEM266Q2M3C6 531 aa27.74■■■□□ 2.03
DHFR-203ENST00000505337 FAM83BQ5T0W9 1011 aa27.74■■■□□ 2.03
DHFR-203ENST00000505337 OPLAHO14841 1288 aa27.73■■■□□ 2.03
DHFR-203ENST00000505337 MOB2Q70IA6 237 aa27.73■■■□□ 2.03
DHFR-203ENST00000505337 MBOAT7Q96N66 472 aa27.73■■■□□ 2.03
DHFR-203ENST00000505337 SPTLC3Q9NUV7 552 aa27.73■■■□□ 2.03
DHFR-203ENST00000505337 CBFA2T2O43439 604 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 PLA2G6O60733 806 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 OFD1O75665 1012 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 GRM1Q13255 1194 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 PDIA5Q14554 519 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 USH1GQ495M9 461 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 ZNF658Q5TYW1 1059 aaPredicted RBP27.72■■■□□ 2.03
DHFR-203ENST00000505337 MOXD1Q6UVY6 613 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 SMYD4Q8IYR2 804 aaPredicted RBP27.72■■■□□ 2.03
DHFR-203ENST00000505337 P2RX7Q99572 595 aaKnown RBP27.72■■■□□ 2.03
DHFR-203ENST00000505337 PPP2R3BQ9Y5P8 575 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 USP11P51784 963 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 FKBP1BP68106 108 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 SEMA3FQ13275 785 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 KCNB1Q14721 858 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 HAS1Q92839 578 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 RAB34Q9BZG1 259 aa27.72■■■□□ 2.03
DHFR-203ENST00000505337 PHIPQ8WWQ0 1821 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 CYP3A7-CYP3A51PA0A087WV96 503 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 KLRC4O43908 158 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 CYP3A7P24462 503 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 UBASH3AP57075 661 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 GSDMDP57764 484 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 TEX2Q8IWB9 1127 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 LRRC8AQ8IWT6 810 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 PLIN2Q99541 437 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 RANBP17Q9H2T7 1088 aaKnown RBP27.71■■■□□ 2.03
DHFR-203ENST00000505337 LRWD1Q9UFC0 647 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 PAPPA2Q9BXP8 1791 aa27.71■■■□□ 2.03
DHFR-203ENST00000505337 SERPINC1P01008 464 aa27.7■■■□□ 2.03
DHFR-203ENST00000505337 SPATA1Q5VX52 437 aa27.7■■■□□ 2.03
DHFR-203ENST00000505337 FILIP1Q7Z7B0 1213 aa27.7■■■□□ 2.03
DHFR-203ENST00000505337 POTEMA6NI47 508 aa27.7■■■□□ 2.02
DHFR-203ENST00000505337 AOC2O75106 756 aa27.7■■■□□ 2.02
DHFR-203ENST00000505337 TAL1P17542 331 aaPredicted RBP27.7■■■□□ 2.02
DHFR-203ENST00000505337 GRB10Q13322 594 aa27.7■■■□□ 2.02
DHFR-203ENST00000505337 RGMBQ6NW40 437 aa27.7■■■□□ 2.02
DHFR-203ENST00000505337 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.7■■■□□ 2.02
DHFR-203ENST00000505337 CALML4Q96GE6 196 aa27.7■■■□□ 2.02
DHFR-203ENST00000505337 THSD7BQ9C0I4 1608 aa27.69■■■□□ 2.02
DHFR-203ENST00000505337 SSC5DA1L4H1 1573 aa27.69■■■□□ 2.02
DHFR-203ENST00000505337 PIK3CDO00329 1044 aa27.69■■■□□ 2.02
DHFR-203ENST00000505337 TRAF1Q13077 416 aa27.69■■■□□ 2.02
DHFR-203ENST00000505337 ARID5BQ14865 1188 aa27.69■■■□□ 2.02
DHFR-203ENST00000505337 NOLC1Q14978 699 aaKnown RBP eCLIP27.69■■■□□ 2.021e-6■■■■□ 20.6
DHFR-203ENST00000505337 KLHL10Q6JEL2 608 aa27.69■■■□□ 2.02
DHFR-203ENST00000505337 TMC6Q7Z403 805 aa27.69■■■□□ 2.02
DHFR-203ENST00000505337 C17orf53Q8N3J3 647 aaPredicted RBP27.69■■■□□ 2.02
DHFR-203ENST00000505337 CHURC1Q8WUH1 139 aa27.69■■■□□ 2.02
DHFR-203ENST00000505337 KCNMB3Q9NPA1 279 aa27.69■■■□□ 2.02
DHFR-203ENST00000505337 INTS13Q9NVM9 706 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms