RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 JMJD4Q9H9V9 463 aa23.28■■□□□ 1.32
UBE2D3-220ENST00000505307 FGBP02675 491 aa23.27■■□□□ 1.32
UBE2D3-220ENST00000505307 MYL3P08590 195 aa23.27■■□□□ 1.32
UBE2D3-220ENST00000505307 SEC23AQ15436 765 aa23.27■■□□□ 1.32
UBE2D3-220ENST00000505307 RPUSD2Q8IZ73 545 aaKnown RBP23.27■■□□□ 1.32
UBE2D3-220ENST00000505307 HERVK_113Q902F9 699 aa23.27■■□□□ 1.32
UBE2D3-220ENST00000505307 IL25Q9H293 177 aa23.27■■□□□ 1.32
UBE2D3-220ENST00000505307 ACRP10323 421 aa23.26■■□□□ 1.31
UBE2D3-220ENST00000505307 TRAF1Q13077 416 aa23.26■■□□□ 1.31
UBE2D3-220ENST00000505307 RMDN3Q96TC7 470 aa23.26■■□□□ 1.31
UBE2D3-220ENST00000505307 AMNQ9BXJ7 453 aa23.26■■□□□ 1.31
UBE2D3-220ENST00000505307 VAT1LQ9HCJ6 419 aa23.26■■□□□ 1.31
UBE2D3-220ENST00000505307 MAP3K20Q9NYL2 800 aaKnown RBP23.26■■□□□ 1.31
UBE2D3-220ENST00000505307 CHMLP26374 656 aa23.25■■□□□ 1.31
UBE2D3-220ENST00000505307 PTPN11Q06124 597 aaPredicted RBP23.25■■□□□ 1.31
UBE2D3-220ENST00000505307 STXBP2Q15833 593 aa23.25■■□□□ 1.31
UBE2D3-220ENST00000505307 NFRKBQ6P4R8 1299 aa23.25■■□□□ 1.31
UBE2D3-220ENST00000505307 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.25■■□□□ 1.314e-11■□□□□ 10.1
UBE2D3-220ENST00000505307 SAMD3Q8N6K7 520 aa23.25■■□□□ 1.31
UBE2D3-220ENST00000505307 MAFAQ8NHW3 353 aaPredicted RBP23.25■■□□□ 1.31
UBE2D3-220ENST00000505307 MYLIPQ8WY64 445 aa23.25■■□□□ 1.31
UBE2D3-220ENST00000505307 TIFAQ96CG3 184 aa23.25■■□□□ 1.31
UBE2D3-220ENST00000505307 TAAR1Q96RJ0 339 aa23.25■■□□□ 1.31
UBE2D3-220ENST00000505307 ERICH2A1L162 156 aa23.24■■□□□ 1.31
UBE2D3-220ENST00000505307 KLRF2D3W0D1 207 aa23.24■■□□□ 1.31
UBE2D3-220ENST00000505307 CCDC62Q6P9F0 684 aa23.24■■□□□ 1.31
UBE2D3-220ENST00000505307 TBC1D5Q92609 795 aa23.24■■□□□ 1.31
UBE2D3-220ENST00000505307 MTMR8Q96EF0 704 aa23.24■■□□□ 1.31
UBE2D3-220ENST00000505307 ZNF576Q9H609 170 aa23.24■■□□□ 1.31
UBE2D3-220ENST00000505307 ZBTB5O15062 677 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 PFKMP08237 780 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 FOSL2P15408 326 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 CCL23P55773 120 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 GHRHRQ02643 423 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 SART3Q15020 963 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 NBPF20Q3BBV1 942 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 ARHGEF16Q5VV41 709 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 CYB5R4Q7L1T6 521 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 RALYLQ86SE5 291 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 STAG2Q8N3U4 1231 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 COL20A1Q9P218 1284 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 UMODL1Q5DID0 1318 aa23.23■■□□□ 1.31
UBE2D3-220ENST00000505307 PALM3A6NDB9 673 aaPredicted RBP23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 EIF3JO75822 258 aaKnown RBP23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 GH1P01241 217 aa23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 CYP21A2P08686 494 aa23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 RAB30Q15771 203 aa23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 COPS5Q92905 334 aa23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 PBX4Q9BYU1 374 aa23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 WNT8AQ9H1J5 351 aa23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 TRMT13Q9NUP7 481 aaKnown RBP23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 MAD2L2Q9UI95 211 aa23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 MSRAQ9UJ68 235 aa23.22■■□□□ 1.31
UBE2D3-220ENST00000505307 IFIT3O14879 490 aaKnown RBP23.21■■□□□ 1.31
UBE2D3-220ENST00000505307 ARIH2O95376 493 aa23.21■■□□□ 1.31
UBE2D3-220ENST00000505307 CFBP00751 764 aa23.21■■□□□ 1.31
UBE2D3-220ENST00000505307 HSD17B4P51659 736 aa23.21■■□□□ 1.31
UBE2D3-220ENST00000505307 PTH1RQ03431 593 aa23.21■■□□□ 1.31
UBE2D3-220ENST00000505307 FAM47CQ5HY64 1035 aa23.21■■□□□ 1.31
UBE2D3-220ENST00000505307 SEPT14Q6ZU15 432 aa23.21■■□□□ 1.31
UBE2D3-220ENST00000505307 NCOA7Q8NI08 942 aa23.21■■□□□ 1.31
UBE2D3-220ENST00000505307 SCN10AQ9Y5Y9 1956 aa23.21■■□□□ 1.31
UBE2D3-220ENST00000505307 UNC80Q8N2C7 3258 aa23.2■■□□□ 1.3
UBE2D3-220ENST00000505307 SGSM2O43147 1006 aa23.2■■□□□ 1.3
UBE2D3-220ENST00000505307 NR3C2P08235 984 aa23.2■■□□□ 1.3
UBE2D3-220ENST00000505307 GRM4Q14833 912 aa23.2■■□□□ 1.3
UBE2D3-220ENST00000505307 GRIN2CQ14957 1233 aa23.2■■□□□ 1.3
UBE2D3-220ENST00000505307 PXMP2Q9NR77 195 aa23.2■■□□□ 1.3
UBE2D3-220ENST00000505307 PCDHA1Q9Y5I3 950 aa23.2■■□□□ 1.3
UBE2D3-220ENST00000505307 PITPNM1O00562 1244 aa23.19■■□□□ 1.3
UBE2D3-220ENST00000505307 CYP2C9P11712 490 aa23.19■■□□□ 1.3
UBE2D3-220ENST00000505307 CASTP20810 708 aaKnown RBP23.19■■□□□ 1.3
UBE2D3-220ENST00000505307 RFC2P35250 354 aa23.19■■□□□ 1.3
UBE2D3-220ENST00000505307 OTOP2Q7RTS6 562 aa23.19■■□□□ 1.3
UBE2D3-220ENST00000505307 AFG1LQ8WV93 481 aa23.19■■□□□ 1.3
UBE2D3-220ENST00000505307 EMID1Q96A84 441 aaPredicted RBP23.19■■□□□ 1.3
UBE2D3-220ENST00000505307 RIOX1Q9H6W3 641 aa23.19■■□□□ 1.3
UBE2D3-220ENST00000505307 CXXC1Q9P0U4 656 aaPredicted RBP23.19■■□□□ 1.3
UBE2D3-220ENST00000505307 MYH6P13533 1939 aa23.19■■□□□ 1.3
UBE2D3-220ENST00000505307 GRXCR1A8MXD5 290 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 E7EWF7 191 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 MMP3P08254 477 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 EIF2AK2P19525 551 aaKnown RBP23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 ARHGAP1Q07960 439 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 BFSP2Q13515 415 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 WTAPQ15007 396 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 LY6KQ17RY6 165 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 KCNV1Q6PIU1 500 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 STOX1Q6ZVD7 989 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 RETREG2Q8NC44 543 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 MAP4K1Q92918 833 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 DDX41Q9UJV9 622 aaKnown RBP23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 SLC4A7Q9Y6M7 1214 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 CUL9Q8IWT3 2517 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 CDH23Q9H251 3354 aa23.18■■□□□ 1.3
UBE2D3-220ENST00000505307 OPLAHO14841 1288 aa23.17■■□□□ 1.3
UBE2D3-220ENST00000505307 PBX2P40425 430 aa23.17■■□□□ 1.3
UBE2D3-220ENST00000505307 LAMC2Q13753 1193 aa23.17■■□□□ 1.3
UBE2D3-220ENST00000505307 DGKDQ16760 1214 aa23.17■■□□□ 1.3
UBE2D3-220ENST00000505307 SESTD1Q86VW0 696 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms