RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 PATL2C9JE40 543 aaKnown RBP18.5■□□□□ 0.55
HDAC6-236ENST00000498808 NKRFO15226 690 aaKnown RBP eCLIP18.5■□□□□ 0.55
HDAC6-236ENST00000498808 KPNA6O60684 536 aa18.5■□□□□ 0.55
HDAC6-236ENST00000498808 KCNA5P22460 613 aa18.5■□□□□ 0.55
HDAC6-236ENST00000498808 ERVK-21P61565 698 aa18.5■□□□□ 0.55
HDAC6-236ENST00000498808 BRDTQ58F21 947 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-236ENST00000498808 AFAP1L1Q8TED9 768 aa18.5■□□□□ 0.55
HDAC6-236ENST00000498808 TGS1Q96RS0 853 aaKnown RBP18.5■□□□□ 0.55
HDAC6-236ENST00000498808 ZBED2Q9BTP6 218 aa18.5■□□□□ 0.55
HDAC6-236ENST00000498808 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
HDAC6-236ENST00000498808 IL17RBQ9NRM6 502 aa18.5■□□□□ 0.55
HDAC6-236ENST00000498808 ECHDC1Q9NTX5 307 aa18.5■□□□□ 0.55
HDAC6-236ENST00000498808 RAD50Q92878 1312 aa18.49■□□□□ 0.55
HDAC6-236ENST00000498808 PTPDC1A2A3K4 754 aa18.49■□□□□ 0.55
HDAC6-236ENST00000498808 LINC01553A4QN01 128 aa18.49■□□□□ 0.55
HDAC6-236ENST00000498808 NMT2O60551 498 aa18.49■□□□□ 0.55
HDAC6-236ENST00000498808 GJB5O95377 273 aa18.49■□□□□ 0.55
HDAC6-236ENST00000498808 PPARAQ07869 468 aa18.49■□□□□ 0.55
HDAC6-236ENST00000498808 PTGISQ16647 500 aa18.49■□□□□ 0.55
HDAC6-236ENST00000498808 TTBK2Q6IQ55 1244 aa18.49■□□□□ 0.55
HDAC6-236ENST00000498808 CAGE1Q8TC20 777 aa18.49■□□□□ 0.55
HDAC6-236ENST00000498808 DHX38Q92620 1227 aaKnown RBP18.49■□□□□ 0.55
HDAC6-236ENST00000498808 MTMR7Q9Y216 660 aa18.49■□□□□ 0.55
HDAC6-236ENST00000498808 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.49■□□□□ 0.55
HDAC6-236ENST00000498808 CXCL10P02778 98 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 ZFYP08048 801 aaPredicted RBP18.48■□□□□ 0.55
HDAC6-236ENST00000498808 EDNRBP24530 442 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 SSTR3P32745 418 aaPredicted RBP18.48■□□□□ 0.55
HDAC6-236ENST00000498808 SLC16A2P36021 539 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 NHLH1Q02575 133 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 TSHZ3Q63HK5 1081 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 GDF6Q6KF10 455 aaPredicted RBP18.48■□□□□ 0.55
HDAC6-236ENST00000498808 CNKSR3Q6P9H4 555 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 LRRC8DQ7L1W4 858 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 SCFD2Q8WU76 684 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 CLEC4DQ8WXI8 215 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 UIMC1Q96RL1 719 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 SEC62Q99442 399 aaKnown RBP18.48■□□□□ 0.55
HDAC6-236ENST00000498808 RAD9AQ99638 391 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
HDAC6-236ENST00000498808 NBNO60934 754 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 ARIH2O95376 493 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 SLC3A2P08195 630 aaKnown RBP18.47■□□□□ 0.55
HDAC6-236ENST00000498808 ALADP13716 330 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 SELPP16109 830 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 CALML3P27482 149 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 CHMP4BP1P59074 171 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 PDE4DQ08499 809 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 CCDC96Q2M329 555 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 PPP4R3BQ5MIZ7 849 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 PTCRAQ6ISU1 281 aaPredicted RBP18.47■□□□□ 0.55
HDAC6-236ENST00000498808 CCDC155Q8N6L0 562 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 NACAP1Q9BZK3 213 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 INCENPQ9NQS7 918 aa18.47■□□□□ 0.55
HDAC6-236ENST00000498808 GRXCR2A6NFK2 248 aa18.46■□□□□ 0.55
HDAC6-236ENST00000498808 TSPY2A6NKD2 308 aa18.46■□□□□ 0.55
HDAC6-236ENST00000498808 TXNP10599 105 aaKnown RBP18.46■□□□□ 0.55
HDAC6-236ENST00000498808 RBL2Q08999 1139 aa18.46■□□□□ 0.55
HDAC6-236ENST00000498808 BTNL9Q6UXG8 535 aa18.46■□□□□ 0.55
HDAC6-236ENST00000498808 SESTD1Q86VW0 696 aa18.46■□□□□ 0.55
HDAC6-236ENST00000498808 NAPBQ9H115 298 aa18.46■□□□□ 0.55
HDAC6-236ENST00000498808 ABHD14A-ACY1A0A1B0GW23 586 aa18.45■□□□□ 0.54
HDAC6-236ENST00000498808 NOVP48745 357 aa18.45■□□□□ 0.54
HDAC6-236ENST00000498808 RPS6P62753 249 aaKnown RBP18.45■□□□□ 0.54
HDAC6-236ENST00000498808 SYDE2Q5VT97 1194 aa18.45■□□□□ 0.54
HDAC6-236ENST00000498808 FAM117BQ6P1L5 589 aa18.45■□□□□ 0.54
HDAC6-236ENST00000498808 RNF207Q6ZRF8 634 aa18.45■□□□□ 0.54
HDAC6-236ENST00000498808 DCAF4Q8WV16 495 aa18.45■□□□□ 0.54
HDAC6-236ENST00000498808 KAT2BQ92831 832 aa18.45■□□□□ 0.54
HDAC6-236ENST00000498808 FBXL18Q96ME1 805 aa18.45■□□□□ 0.54
HDAC6-236ENST00000498808 C17orf80Q9BSJ5 609 aa18.45■□□□□ 0.54
HDAC6-236ENST00000498808 ZNF318Q5VUA4 2279 aa18.45■□□□□ 0.54
HDAC6-236ENST00000498808 POTEB3A0JP26 581 aa18.44■□□□□ 0.54
HDAC6-236ENST00000498808 FOXP2O15409 715 aa18.44■□□□□ 0.54
HDAC6-236ENST00000498808 MS4A1P11836 297 aa18.44■□□□□ 0.54
HDAC6-236ENST00000498808 CKBP12277 381 aa18.44■□□□□ 0.54
HDAC6-236ENST00000498808 CTDSPL2Q05D32 466 aa18.44■□□□□ 0.54
HDAC6-236ENST00000498808 CSPP1Q1MSJ5 1256 aa18.44■□□□□ 0.54
HDAC6-236ENST00000498808 POTEBQ6S5H4 581 aa18.44■□□□□ 0.54
HDAC6-236ENST00000498808 NEK9Q8TD19 979 aa18.44■□□□□ 0.54
HDAC6-236ENST00000498808 AFG1LQ8WV93 481 aa18.44■□□□□ 0.54
HDAC6-236ENST00000498808 H3BQ06 376 aaPredicted RBP18.43■□□□□ 0.54
HDAC6-236ENST00000498808 DCXO43602 365 aa18.43■□□□□ 0.54
HDAC6-236ENST00000498808 PARNO95453 639 aaKnown RBP18.43■□□□□ 0.54
HDAC6-236ENST00000498808 MMP3P08254 477 aa18.43■□□□□ 0.54
HDAC6-236ENST00000498808 CCDC62Q6P9F0 684 aa18.43■□□□□ 0.54
HDAC6-236ENST00000498808 TRAF7Q6Q0C0 670 aa18.43■□□□□ 0.54
HDAC6-236ENST00000498808 DNERQ8NFT8 737 aa18.43■□□□□ 0.54
HDAC6-236ENST00000498808 FRMPD2Q68DX3 1309 aaPredicted RBP18.43■□□□□ 0.54
HDAC6-236ENST00000498808 HNRNPUQ00839 825 aaKnown RBP eCLIP18.42■□□□□ 0.54
HDAC6-236ENST00000498808 FBXO22Q8NEZ5 403 aa18.42■□□□□ 0.54
HDAC6-236ENST00000498808 MRPL38Q96DV4 380 aaKnown RBP18.42■□□□□ 0.54
HDAC6-236ENST00000498808 CRBNQ96SW2 442 aa18.42■□□□□ 0.54
HDAC6-236ENST00000498808 MPHOSPH6Q99547 160 aaKnown RBP18.42■□□□□ 0.54
HDAC6-236ENST00000498808 KCNH6Q9H252 994 aa18.42■□□□□ 0.54
HDAC6-236ENST00000498808 GPCPD1Q9NPB8 672 aa18.42■□□□□ 0.54
HDAC6-236ENST00000498808 GTF2IRD1Q9UHL9 959 aa18.42■□□□□ 0.54
HDAC6-236ENST00000498808 WDFY4Q6ZS81 3184 aa18.42■□□□□ 0.54
HDAC6-236ENST00000498808 MICAL3Q7RTP6 2002 aa18.41■□□□□ 0.54
HDAC6-236ENST00000498808 EFCAB14O75071 495 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms