RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PCDHA8Q9Y5H6 950 aa6.93□□□□□ -1.3
VPS36-206ENST00000497149 PSPNO60542 156 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 NAT1P18440 290 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 SDSP20132 328 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 TRHRP34981 398 aaPredicted RBP6.92□□□□□ -1.3
VPS36-206ENST00000497149 BCL6P41182 706 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 GTF2A2P52657 109 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 CORO7P57737 925 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 RPL11P62913 178 aaKnown RBP6.92□□□□□ -1.3
VPS36-206ENST00000497149 GUCY1A3Q02108 690 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 LSAMPQ13449 338 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 TIGD5Q53EQ6 642 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 FGD2Q7Z6J4 655 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 MYLIPQ8WY64 445 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 PLCD4Q9BRC7 762 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 IMPACTQ9P2X3 320 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 GULP1Q9UBP9 304 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 ACSL6Q9UKU0 697 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 TAF6LQ9Y6J9 622 aa6.92□□□□□ -1.3
VPS36-206ENST00000497149 A0A1W2PQ27 194 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 A0A1W2PQ64 194 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 A0A1W2PQC6 194 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 A0A1W2PQD8 194 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 DNAJC8O75937 253 aaPredicted RBP6.91□□□□□ -1.3
VPS36-206ENST00000497149 RASGRP1O95267 797 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 EFEMP2O95967 443 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 RAC2P15153 192 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 PRKCAP17252 672 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 RBM10P98175 930 aaKnown RBP6.91□□□□□ -1.3
VPS36-206ENST00000497149 MVKQ03426 396 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 KIR3DS1Q14943 382 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 SNX17Q15036 470 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 TM4SF20Q53R12 229 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 MTDHQ86UE4 582 aaKnown RBP6.91□□□□□ -1.3
VPS36-206ENST00000497149 LILRA2Q8N149 483 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 MFSD3Q96ES6 412 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 CHAMP1Q96JM3 812 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 INTS7Q9NVH2 962 aaKnown RBP6.91□□□□□ -1.3
VPS36-206ENST00000497149 MAGEC2Q9UBF1 373 aaPredicted RBP6.91□□□□□ -1.3
VPS36-206ENST00000497149 FBXL7Q9UJT9 491 aa6.91□□□□□ -1.3
VPS36-206ENST00000497149 OAS3Q9Y6K5 1087 aaKnown RBP6.91□□□□□ -1.3
VPS36-206ENST00000497149 TCRBV16S1A1N1A0A5B0 115 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 IRS4O14654 1257 aaPredicted RBP6.9□□□□□ -1.3
VPS36-206ENST00000497149 MSL3P1P0C860 447 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 AFMP43652 599 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 MASP1P48740 699 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 KIZQ2M2Z5 673 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 CBLL1Q75N03 491 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 CEP68Q76N32 757 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 NLRX1Q86UT6 975 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 FLAD1Q8NFF5 587 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 NUP43Q8NFH3 380 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 PLEKHO2Q8TD55 490 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 SHISA4Q96DD7 197 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 ALG1Q9BT22 464 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 MTA3Q9BTC8 594 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 CDIP1Q9H305 208 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 TMX1Q9H3N1 280 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 PDLIM7Q9NR12 457 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 BTG4Q9NY30 223 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.9□□□□□ -1.3
VPS36-206ENST00000497149 RWDD3Q9Y3V2 267 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 PRKAB1Q9Y478 270 aa6.9□□□□□ -1.3
VPS36-206ENST00000497149 ANKRD62A6NC57 917 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 ARVCFO00192 962 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 FUCA1P04066 466 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 ASLP04424 464 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 APPP05067 770 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 PAK1Q13153 545 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 LZTR1Q8N653 840 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 PCDH19Q8TAB3 1148 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 ABHD4Q8TB40 342 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 USP33Q8TEY7 942 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 TMEM169Q96HH4 297 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 FMNL2Q96PY5 1086 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 CLDND1Q9NY35 253 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 MARCH2Q9P0N8 246 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 GPR160Q9UJ42 338 aa6.89□□□□□ -1.31
VPS36-206ENST00000497149 TNPO3Q9Y5L0 923 aaKnown RBP6.89□□□□□ -1.31
VPS36-206ENST00000497149 A0A087X0B3 334 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 C22orf46C9J442 243 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 H7BY64 318 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 PAX4O43316 350 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 SOD2P04179 222 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 MYCLP1P12525 358 aaPredicted RBP6.88□□□□□ -1.31
VPS36-206ENST00000497149 KCNA6P17658 529 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 CYP4F8P98187 520 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 RNF187Q5TA31 235 aaPredicted RBP6.88□□□□□ -1.31
VPS36-206ENST00000497149 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 FYB2Q5VWT5 728 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 ATG4DQ86TL0 474 aaPredicted RBP6.88□□□□□ -1.31
VPS36-206ENST00000497149 LRRTM3Q86VH5 581 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 NLRP10Q86W26 655 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 TEX2Q8IWB9 1127 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 Q8N1Y9 231 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 TRMT2BQ96GJ1 504 aaKnown RBP6.88□□□□□ -1.31
VPS36-206ENST00000497149 GOLGA2P5Q9HBQ8 144 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 CRTAC1Q9NQ79 661 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 PPARGC1AQ9UBK2 798 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms