RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 IRF2BP1Q8IU81 584 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 IFNL3Q8IZI9 196 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 SHISA4Q96DD7 197 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 LIN37Q96GY3 246 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 ALG1Q9BT22 464 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 FANCLQ9NW38 375 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 NDOR1Q9UHB4 597 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 SFMBT1Q9UHJ3 866 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 NPFFR2Q9Y5X5 522 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 TLDC2A0PJX2 215 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 LRRC10BA6NIK2 292 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 NUDT19A8MXV4 375 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 C22orf46C9J442 243 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 CDC45O75419 566 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 NAT1P18440 290 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 SDHBP21912 280 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 GPR85P60893 370 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 SQSTM1Q13501 440 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 RAB3GAP1Q15042 981 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 TEX2Q8IWB9 1127 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 KISS1RQ969F8 398 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 KANSL2Q9H9L4 492 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 TMEM260Q9NX78 707 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 CLDND1Q9NY35 253 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 NUDT5Q9UKK9 219 aa7.16□□□□□ -1.26
HMGB1P38-201ENST00000490557 ZNF503-AS2A6NEH8 195 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 EFCAB14O75071 495 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 ASMTLO95671 621 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 EFEMP2O95967 443 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 TCEA2Q15560 299 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 MLANAQ16655 118 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 KIZQ2M2Z5 673 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 GIMAP6Q6P9H5 292 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 DIRC2Q96SL1 478 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 EPB41L4BQ9H329 900 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 NSUN3Q9H649 340 aaKnown RBP7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 DCP1AQ9NPI6 582 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 TRAF6Q9Y4K3 522 aa7.15□□□□□ -1.26
HMGB1P38-201ENST00000490557 ARNTLO00327 626 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 ABLIM1O14639 778 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 CLSTN1O94985 981 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 FPR2P25090 351 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 ERVFRD-1P60508 538 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 NR1I3Q14994 352 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 TAF7LQ5H9L4 462 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 CARMIL2Q6F5E8 1435 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 PAQR3Q6TCH7 311 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 ZNF605Q86T29 641 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 SYNPOQ8N3V7 929 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 DPF3Q92784 378 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 MTA3Q9BTC8 594 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 MRPL4Q9BYD3 311 aaKnown RBP7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 TNFRSF12AQ9NP84 129 aa7.14□□□□□ -1.27
HMGB1P38-201ENST00000490557 H7BY64 318 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 PAX4O43316 350 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 CYBBP04839 570 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 GUCY1A3Q02108 690 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 MROH9Q5TGP6 573 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 WWC2Q6AWC2 1192 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 TMEM132EQ6IEE7 984 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 LBX2Q6XYB7 198 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 C16orf86Q6ZW13 317 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 MAGEB10Q96LZ2 347 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 AP5M1Q9H0R1 490 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 NCOA5Q9HCD5 579 aaKnown RBP7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 TBX22Q9Y458 520 aa7.13□□□□□ -1.27
HMGB1P38-201ENST00000490557 F8W031 263 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 PLD2O14939 933 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 SRGAP3O43295 1099 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 MSCO60682 206 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 PPP1R11O60927 126 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 DGKIO75912 1065 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 NTRK1P04629 796 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 DBHP09172 617 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 C6orf222P0C671 652 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 GLI4P10075 376 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 GRK2P25098 689 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 GRK3P35626 688 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 PRR23BQ6ZRT6 265 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 DCP2Q8IU60 420 aaKnown RBP7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 PLEKHO2Q8TD55 490 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 PEX11GQ96HA9 241 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 SLC52A2Q9HAB3 445 aa7.12□□□□□ -1.27
HMGB1P38-201ENST00000490557 ASXL2Q76L83 1435 aa7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 ZC3H12DA2A288 527 aaKnown RBP7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 FAM47E-STBD1D6RA91 191 aa7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 PPP1R12AO14974 1030 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 RAPGEF3O95398 923 aa7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 PAK1Q13153 545 aa7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 CHRNA2Q15822 529 aa7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 SDE2Q6IQ49 451 aa7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 ZC3H14Q6PJT7 736 aaKnown RBP7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 RPTNQ6XPR3 784 aa7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 NLRP10Q86W26 655 aa7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 ZC3H7AQ8IWR0 971 aaKnown RBP7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 NETO2Q8NC67 525 aa7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 SLKQ9H2G2 1235 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 EPB41L1Q9H4G0 881 aa7.11□□□□□ -1.27
HMGB1P38-201ENST00000490557 FBXL7Q9UJT9 491 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms