RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 HOMER1Q86YM7 354 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 TDHQ8IZJ6 230 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 SCFD2Q8WU76 684 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 NEK1Q96PY6 1258 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 SPZ1Q9BXG8 430 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 SEZ6LQ9BYH1 1024 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 PRDM5Q9NQX1 630 aaPredicted RBP20.27■□□□□ 0.84
ATG3-205ENST00000488910 TRIM43BA6NCK2 446 aa20.26■□□□□ 0.83
ATG3-205ENST00000488910 ARVCFO00192 962 aa20.26■□□□□ 0.83
ATG3-205ENST00000488910 OPLAHO14841 1288 aa20.26■□□□□ 0.83
ATG3-205ENST00000488910 PQBP1O60828 265 aaKnown RBP20.26■□□□□ 0.83
ATG3-205ENST00000488910 KRT32Q14532 448 aa20.26■□□□□ 0.83
ATG3-205ENST00000488910 STXBP2Q15833 593 aa20.26■□□□□ 0.83
ATG3-205ENST00000488910 ARHGEF16Q5VV41 709 aa20.26■□□□□ 0.83
ATG3-205ENST00000488910 TRIM43Q96BQ3 446 aaPredicted RBP20.26■□□□□ 0.83
ATG3-205ENST00000488910 COL20A1Q9P218 1284 aa20.26■□□□□ 0.83
ATG3-205ENST00000488910 KIAA0355O15063 1070 aa20.25■□□□□ 0.83
ATG3-205ENST00000488910 TTLL4Q14679 1199 aa20.25■□□□□ 0.83
ATG3-205ENST00000488910 PPP2R5BQ15173 497 aa20.25■□□□□ 0.83
ATG3-205ENST00000488910 TMEM63BQ5T3F8 832 aa20.25■□□□□ 0.83
ATG3-205ENST00000488910 SH3RF1Q7Z6J0 888 aa20.25■□□□□ 0.83
ATG3-205ENST00000488910 SGMS1Q86VZ5 419 aa20.25■□□□□ 0.83
ATG3-205ENST00000488910 MYL10Q9BUA6 226 aa20.25■□□□□ 0.83
ATG3-205ENST00000488910 SLC12A7Q9Y666 1083 aa20.25■□□□□ 0.83
ATG3-205ENST00000488910 CPT1AP50416 773 aa20.24■□□□□ 0.83
ATG3-205ENST00000488910 EXOSC10Q01780 885 aaKnown RBP20.24■□□□□ 0.83
ATG3-205ENST00000488910 FAAP100Q0VG06 881 aa20.24■□□□□ 0.83
ATG3-205ENST00000488910 COL9A3Q14050 684 aaPredicted RBP20.24■□□□□ 0.83
ATG3-205ENST00000488910 LRIT3Q3SXY7 679 aa20.24■□□□□ 0.83
ATG3-205ENST00000488910 BRDTQ58F21 947 aaPredicted RBP20.24■□□□□ 0.83
ATG3-205ENST00000488910 CXCL17Q6UXB2 119 aa20.24■□□□□ 0.83
ATG3-205ENST00000488910 DHX32Q7L7V1 743 aaKnown RBP20.24■□□□□ 0.83
ATG3-205ENST00000488910 RRP36Q96EU6 259 aaKnown RBP20.24■□□□□ 0.83
ATG3-205ENST00000488910 PXMP2Q9NR77 195 aa20.24■□□□□ 0.83
ATG3-205ENST00000488910 TMEM39AQ9NV64 488 aa20.24■□□□□ 0.83
ATG3-205ENST00000488910 GCOM1H8Y6P7 765 aaPredicted RBP20.23■□□□□ 0.83
ATG3-205ENST00000488910 EIF3JO75822 258 aaKnown RBP20.23■□□□□ 0.83
ATG3-205ENST00000488910 HMGB1P09429 215 aaKnown RBP20.23■□□□□ 0.83
ATG3-205ENST00000488910 POLR2MP0CAP2 368 aa20.23■□□□□ 0.83
ATG3-205ENST00000488910 TXNP10599 105 aaKnown RBP20.23■□□□□ 0.83
ATG3-205ENST00000488910 PTGS1P23219 599 aa20.23■□□□□ 0.83
ATG3-205ENST00000488910 SYNE3Q6ZMZ3 975 aa20.23■□□□□ 0.83
ATG3-205ENST00000488910 RASEFQ8IZ41 740 aa20.23■□□□□ 0.83
ATG3-205ENST00000488910 SLC43A3Q8NBI5 491 aa20.23■□□□□ 0.83
ATG3-205ENST00000488910 OR6J1Q8NGC5 347 aa20.23■□□□□ 0.83
ATG3-205ENST00000488910 LRRC2Q9BYS8 371 aa20.23■□□□□ 0.83
ATG3-205ENST00000488910 POLR3EQ9NVU0 708 aa20.23■□□□□ 0.83
ATG3-205ENST00000488910 PPP4R2Q9NY27 417 aa20.23■□□□□ 0.83
ATG3-205ENST00000488910 TLR3O15455 904 aaKnown RBP20.22■□□□□ 0.83
ATG3-205ENST00000488910 KPNA6O60684 536 aa20.22■□□□□ 0.83
ATG3-205ENST00000488910 NR3C2P08235 984 aa20.22■□□□□ 0.83
ATG3-205ENST00000488910 RAG1P15918 1043 aa20.22■□□□□ 0.83
ATG3-205ENST00000488910 EIF2AK2P19525 551 aaKnown RBP20.22■□□□□ 0.83
ATG3-205ENST00000488910 ITGA7Q13683 1181 aa20.22■□□□□ 0.83
ATG3-205ENST00000488910 FANCBQ8NB91 859 aa20.22■□□□□ 0.83
ATG3-205ENST00000488910 BADQ92934 168 aa20.22■□□□□ 0.83
ATG3-205ENST00000488910 KCNB2Q92953 911 aa20.22■□□□□ 0.83
ATG3-205ENST00000488910 SEC63Q9UGP8 760 aaKnown RBP20.22■□□□□ 0.83
ATG3-205ENST00000488910 LTBP2Q14767 1821 aa20.21■□□□□ 0.83
ATG3-205ENST00000488910 REC8O95072 547 aa20.21■□□□□ 0.83
ATG3-205ENST00000488910 CCDC62Q6P9F0 684 aa20.21■□□□□ 0.83
ATG3-205ENST00000488910 SEPT14Q6ZU15 432 aa20.21■□□□□ 0.83
ATG3-205ENST00000488910 SRBD1Q8N5C6 995 aaKnown RBP20.21■□□□□ 0.83
ATG3-205ENST00000488910 PCDH10Q9P2E7 1040 aa20.21■□□□□ 0.83
ATG3-205ENST00000488910 A6NJR5 290 aa20.2■□□□□ 0.82
ATG3-205ENST00000488910 HOXA13P31271 388 aaPredicted RBP20.2■□□□□ 0.82
ATG3-205ENST00000488910 ADCK5Q3MIX3 580 aa20.2■□□□□ 0.82
ATG3-205ENST00000488910 FAM126BQ8IXS8 530 aa20.2■□□□□ 0.82
ATG3-205ENST00000488910 PIBF1Q8WXW3 757 aa20.2■□□□□ 0.82
ATG3-205ENST00000488910 PDCD2LQ9BRP1 358 aa20.2■□□□□ 0.82
ATG3-205ENST00000488910 TBX21Q9UL17 535 aa20.2■□□□□ 0.82
ATG3-205ENST00000488910 LAMA3Q16787 3333 aa20.2■□□□□ 0.82
ATG3-205ENST00000488910 KIAA1217Q5T5P2 1943 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 ARIH2O95376 493 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 PLEKHA8P1O95397 391 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 TIMP1P01033 207 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 CD4P01730 458 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 CENPBP07199 599 aaPredicted RBP20.19■□□□□ 0.82
ATG3-205ENST00000488910 RXRAP19793 462 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 ITGB8P26012 769 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 HSPA4P34932 840 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 PURAQ00577 322 aaKnown RBP20.19■□□□□ 0.82
ATG3-205ENST00000488910 GPR153Q6NV75 609 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 KCNV1Q6PIU1 500 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 VSIG10LQ86VR7 867 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 COPS5Q92905 334 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 MTG1Q9BT17 334 aaPredicted RBP20.19■□□□□ 0.82
ATG3-205ENST00000488910 GRIN2DO15399 1336 aa20.19■□□□□ 0.82
ATG3-205ENST00000488910 SZT2Q5T011 3432 aa20.18■□□□□ 0.82
ATG3-205ENST00000488910 SOX1O00570 391 aaPredicted RBP20.18■□□□□ 0.82
ATG3-205ENST00000488910 EPB41L2O43491 1005 aaKnown RBP20.18■□□□□ 0.82
ATG3-205ENST00000488910 GH1P01241 217 aa20.18■□□□□ 0.82
ATG3-205ENST00000488910 MYL3P08590 195 aa20.18■□□□□ 0.82
ATG3-205ENST00000488910 PGM5Q15124 567 aa20.18■□□□□ 0.82
ATG3-205ENST00000488910 APOA5Q6Q788 366 aa20.18■□□□□ 0.82
ATG3-205ENST00000488910 TMTC3Q6ZXV5 915 aa20.18■□□□□ 0.82
ATG3-205ENST00000488910 FCHSD1Q86WN1 690 aa20.18■□□□□ 0.82
ATG3-205ENST00000488910 RBM28Q9NW13 759 aaKnown RBP20.18■□□□□ 0.82
ATG3-205ENST00000488910 DDX41Q9UJV9 622 aaKnown RBP20.18■□□□□ 0.82
ATG3-205ENST00000488910 MYCLP12524 364 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms