RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 PAQR3Q6TCH7 311 aa4.81□□□□□ -1.64
RBM28-207ENST00000488249 RPTNQ6XPR3 784 aa4.81□□□□□ -1.64
RBM28-207ENST00000488249 CABP7Q86V35 215 aa4.81□□□□□ -1.64
RBM28-207ENST00000488249 ZBTB38Q8NAP3 1195 aaPredicted RBP4.81□□□□□ -1.64
RBM28-207ENST00000488249 PLEKHO2Q8TD55 490 aa4.81□□□□□ -1.64
RBM28-207ENST00000488249 USP33Q8TEY7 942 aa4.81□□□□□ -1.64
RBM28-207ENST00000488249 KCNN1Q92952 543 aa4.81□□□□□ -1.64
RBM28-207ENST00000488249 PPP1R16BQ96T49 567 aa4.81□□□□□ -1.64
RBM28-207ENST00000488249 DNAJC7Q99615 494 aa4.81□□□□□ -1.64
RBM28-207ENST00000488249 MARCH2Q9P0N8 246 aa4.81□□□□□ -1.64
RBM28-207ENST00000488249 NPFFR2Q9Y5X5 522 aa4.81□□□□□ -1.64
RBM28-207ENST00000488249 BTBD11A6QL63 1104 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 ETV2O00321 342 aaPredicted RBP4.8□□□□□ -1.64
RBM28-207ENST00000488249 MYO1BO43795 1136 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 KRT1P04264 644 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 C8AP07357 584 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 FAM153BP0C7A2 387 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 TMEM253P0C7T8 217 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 LCP1P13796 627 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 BCL6P41182 706 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 MAPKAPK2P49137 400 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 GTF2A2P52657 109 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 NFE2L2Q16236 605 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 PLEKHN1Q494U1 663 aaPredicted RBP4.8□□□□□ -1.64
RBM28-207ENST00000488249 USP53Q70EK8 1073 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 TEX2Q8IWB9 1127 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 SCUBE1Q8IWY4 988 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 CDC6Q99741 560 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 LNPKQ9C0E8 428 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 SIRT5Q9NXA8 310 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 BTG4Q9NY30 223 aa4.8□□□□□ -1.64
RBM28-207ENST00000488249 CDK11AQ9UQ88 783 aaPredicted RBP4.8□□□□□ -1.64
RBM28-207ENST00000488249 ZC3H12DA2A288 527 aaKnown RBP4.79□□□□□ -1.64
RBM28-207ENST00000488249 C22orf46C9J442 243 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 F8W031 263 aaPredicted RBP4.79□□□□□ -1.64
RBM28-207ENST00000488249 NFIBO00712 420 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 TSPAN15O95858 294 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 MED14OSP0DP75 135 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 GLDCP23378 1020 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 LSAMPQ13449 338 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 BMS1Q14692 1282 aaKnown RBP4.79□□□□□ -1.64
RBM28-207ENST00000488249 ZNF124Q15973 351 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 NTRK3Q16288 839 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 PKN1Q16512 942 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 LONRF2Q1L5Z9 754 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 FAM209AQ5JX71 171 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 FOXB2Q5VYV0 432 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 WWC2Q6AWC2 1192 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 ZC3H14Q6PJT7 736 aaKnown RBP4.79□□□□□ -1.64
RBM28-207ENST00000488249 RSPO2Q6UXX9 243 aaPredicted RBP4.79□□□□□ -1.64
RBM28-207ENST00000488249 CEP68Q76N32 757 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 TMC6Q7Z403 805 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 KRTAP19-1Q8IUB9 90 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 NETO2Q8NC67 525 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 DCAF4Q8WV16 495 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 SGPP1Q9BX95 441 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 ZSWIM4Q9H7M6 989 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 CNTD2Q9H8S5 307 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 GCM1Q9NP62 436 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 GPR27Q9NS67 375 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 MBD1Q9UIS9 605 aaPredicted RBP4.79□□□□□ -1.64
RBM28-207ENST00000488249 DBR1Q9UK59 544 aaKnown RBP4.79□□□□□ -1.64
RBM28-207ENST00000488249 PCDHA2Q9Y5H9 948 aa4.79□□□□□ -1.64
RBM28-207ENST00000488249 TRBV23-1A0A0A0MS06 115 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 BLACEA4D250 179 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 H7BY64 318 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 MSCO60682 206 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 NTRK1P04629 796 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 C1QTNF9P0C862 333 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 FPR2P25090 351 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 RAP1GAPP47736 663 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 DLG4P78352 724 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 PRR5P85299 388 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 CCDC144BQ3MJ40 725 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 ZC3H12BQ5HYM0 836 aaKnown RBP4.78□□□□□ -1.64
RBM28-207ENST00000488249 KCNT2Q6UVM3 1135 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 ATG14Q6ZNE5 492 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 NLRP10Q86W26 655 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 Q8N1Y9 231 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 JMYQ8N9B5 988 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 TRMT2BQ96GJ1 504 aaKnown RBP4.78□□□□□ -1.64
RBM28-207ENST00000488249 PEX11GQ96HA9 241 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 TMEM169Q96HH4 297 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 CHAMP1Q96JM3 812 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 EXOC2Q96KP1 924 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 IPO9Q96P70 1041 aaKnown RBP4.78□□□□□ -1.64
RBM28-207ENST00000488249 PHF20Q9BVI0 1012 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 GOLGA2P5Q9HBQ8 144 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 RXFP1Q9HBX9 757 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 FBXL7Q9UJT9 491 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 NUDT5Q9UKK9 219 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 HCFC2Q9Y5Z7 792 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 X6R8D5 127 aa4.78□□□□□ -1.64
RBM28-207ENST00000488249 EIF5BO60841 1220 aaKnown RBP4.77□□□□□ -1.65
RBM28-207ENST00000488249 SUMO1P63165 101 aaKnown RBP4.77□□□□□ -1.65
RBM28-207ENST00000488249 MROH9Q5TGP6 573 aa4.77□□□□□ -1.65
RBM28-207ENST00000488249 STYK1Q6J9G0 422 aa4.77□□□□□ -1.65
RBM28-207ENST00000488249 DPH6Q7L8W6 267 aa4.77□□□□□ -1.65
RBM28-207ENST00000488249 LDHDQ86WU2 507 aa4.77□□□□□ -1.65
RBM28-207ENST00000488249 RIOX2Q8IUF8 465 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms