RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 TAF5LO75529 589 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 CXCL10P02778 98 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 ZNF865P0CJ78 1059 aaPredicted RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 FCER1AP12319 257 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 ALADP13716 330 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 FOSL2P15408 326 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 TCF3P15923 654 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 FSHRP23945 695 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 SLC19A1P41440 591 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 MAPK8P45983 427 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 SKOR1P84550 965 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 MAP3K12Q12852 859 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 TIGD5Q53EQ6 642 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 INTS6LQ5JSJ4 861 aaKnown RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 ZNF787Q6DD87 383 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 NAA16Q6N069 864 aaPredicted RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 KCNV1Q6PIU1 500 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 C16orf86Q6ZW13 317 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 TAS1R3Q7RTX0 852 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 TIFAQ96CG3 184 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 XAGE2Q96GT9 111 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 POP1Q99575 1024 aaKnown RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 BACH2Q9BYV9 841 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 UPF3BQ9BZI7 483 aaKnown RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 ABHD16BQ9H3Z7 469 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 KANSL2Q9H9L4 492 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 TCP11L1Q9NUJ3 509 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 HMG20BQ9P0W2 317 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 SERPINB13Q9UIV8 391 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 PPP1R9AQ9ULJ8 1098 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 GPSM3Q9Y4H4 160 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 DDTLA6NHG4 134 aaPredicted RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 FRAT2O75474 233 aaPredicted RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 RB1P06400 928 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 P4HBP07237 508 aaKnown RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 VCAM1P19320 739 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 MCAMP43121 646 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 ATP8B2P98198 1209 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 NFIAQ12857 509 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 TREML2Q5T2D2 321 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 BTNL9Q6UXG8 535 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 CYP26C1Q6V0L0 522 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 VASH1Q7L8A9 365 aaPredicted RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 RASGRP2Q7LDG7 609 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 ARMC2Q8NEN0 867 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 AFAP1L1Q8TED9 768 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 APBB2Q92870 758 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 SEMA4AQ9H3S1 761 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 DDX4Q9NQI0 724 aaKnown RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 LAS1LQ9Y4W2 734 aaKnown RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 SCN10AQ9Y5Y9 1956 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 KMT2EQ8IZD2 1858 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 KIAA1671Q9BY89 1806 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 A6NHS1 94 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 C5orf67F2Z3F1 127 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 STAM2O75886 525 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 FGRP09769 529 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 WEE1P30291 646 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 BFSP2Q13515 415 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 ALX1Q15699 326 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 ABCB5Q2M3G0 1257 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 NBPF20Q3BBV1 942 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 LRRC24Q50LG9 513 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 XRRA1Q6P2D8 792 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 DLK2Q6UY11 383 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 TMC7Q7Z402 723 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 FAM126BQ8IXS8 530 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 CCDC146Q8IYE0 955 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 ANKRD13CQ8N6S4 541 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 DNERQ8NFT8 737 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 DCAF4Q8WV16 495 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 CDCA3Q99618 268 aaPredicted RBP3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 TINF2Q9BSI4 451 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 PLVAPQ9BX97 442 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 TEX13BQ9BXU2 312 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 PUS3Q9BZE2 481 aaKnown RBP3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 KATNBL1Q9H079 304 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 STAP2Q9UGK3 403 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 ANAPC4Q9UJX5 808 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 ZNFX1Q9P2E3 1918 aaKnown RBP3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 ABHD14A-ACY1A0A1B0GW23 586 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 A0A1W2PQ45 241 aaPredicted RBP3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 A0A1W2PQY0 241 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 NBPF7P0C2Y1 421 aaPredicted RBP3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 CYP2C8P10632 490 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 EDNRBP24530 442 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 PRDX5P30044 214 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 HOXC8P31273 242 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 SHMT1P34896 483 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 PHKA1P46020 1223 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 SPP2Q13103 211 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 USP4Q13107 963 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 CBX2Q14781 532 aaPredicted RBP3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 GRIK5Q16478 980 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 CCDC184Q52MB2 194 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 TNNI3KQ59H18 835 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 TMEM240Q5SV17 173 aa3.26□□□□□ -1.89
DEPDC1-203ENST00000488146 PRAMEF18Q5VWM3 479 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms