RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 GCOM1H8Y6P7 765 aaPredicted RBP8.66□□□□□ -1.02
CPNE1-226ENST00000486021 SGSM2O43147 1006 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 EIF5BO60841 1220 aaKnown RBP8.66□□□□□ -1.02
CPNE1-226ENST00000486021 DDAH1O94760 285 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 FGBP02675 491 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 CYP21A2P08686 494 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 HMGB1P09429 215 aaKnown RBP8.66□□□□□ -1.02
CPNE1-226ENST00000486021 POLR2MP0CAP2 368 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 BEX3Q00994 111 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 LAMC2Q13753 1193 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 KRT32Q14532 448 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 SHHQ15465 462 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 RAB30Q15771 203 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 DGKDQ16760 1214 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 QRICH1Q2TAL8 776 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 TMEM67Q5HYA8 995 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 CXCL17Q6UXB2 119 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 TEX2Q8IWB9 1127 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 FAM126BQ8IXS8 530 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 DHX37Q8IY37 1157 aaKnown RBP8.66□□□□□ -1.02
CPNE1-226ENST00000486021 GIMAP8Q8ND71 665 aaPredicted RBP8.66□□□□□ -1.02
CPNE1-226ENST00000486021 CLEC4DQ8WXI8 215 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 TNPO1Q92973 898 aaKnown RBP8.66□□□□□ -1.02
CPNE1-226ENST00000486021 TRIM43Q96BQ3 446 aaPredicted RBP8.66□□□□□ -1.02
CPNE1-226ENST00000486021 RRP36Q96EU6 259 aaKnown RBP8.66□□□□□ -1.02
CPNE1-226ENST00000486021 FGD4Q96M96 766 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 IL23AQ9NPF7 189 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 PCDHA1Q9Y5I3 950 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 CEP290O15078 2479 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 SCN10AQ9Y5Y9 1956 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-226ENST00000486021 PALM3A6NDB9 673 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-226ENST00000486021 KIF28PB7ZC32 967 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 CD4P01730 458 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 NEFLP07196 543 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 GSPT1P15170 499 aaKnown RBP8.65□□□□□ -1.02
CPNE1-226ENST00000486021 EDNRBP24530 442 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 CCND2P30279 289 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 GRM4Q14833 912 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 SEC23AQ15436 765 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 FAM47CQ5HY64 1035 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 SLC30A10Q6XR72 485 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 SEPT14Q6ZU15 432 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 SH3RF1Q7Z6J0 888 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 SLC43A3Q8NBI5 491 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 SMARCC2Q8TAQ2 1214 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 CAGE1Q8TC20 777 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 LENG1Q96BZ8 264 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-226ENST00000486021 GAS2L1Q99501 681 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-226ENST00000486021 GLT8D2Q9H1C3 349 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 JMJD4Q9H9V9 463 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 MTMR10Q9NXD2 777 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 TBX21Q9UL17 535 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 RBM8AQ9Y5S9 174 aaKnown RBP8.65□□□□□ -1.02
CPNE1-226ENST00000486021 MRVI1Q9Y6F6 885 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 GBF1Q92538 1859 aa8.65□□□□□ -1.02
CPNE1-226ENST00000486021 TANC1Q9C0D5 1861 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 A6NJR5 290 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 PITPNM1O00562 1244 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 SOX1O00570 391 aaPredicted RBP8.64□□□□□ -1.03
CPNE1-226ENST00000486021 EFCAB14O75071 495 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 NR3C2P08235 984 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 GNAT1P11488 350 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 PDE4AP27815 886 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 LIFRP42702 1097 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 HSD17B4P51659 736 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 FGD1P98174 961 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 PURAQ00577 322 aaKnown RBP8.64□□□□□ -1.03
CPNE1-226ENST00000486021 NEDD9Q14511 834 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 BMP2KLQ5H9B9 411 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 XRRA1Q6P2D8 792 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 NLRX1Q86UT6 975 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 HOMER1Q86YM7 354 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 C7orf31Q8N865 590 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 SYTL5Q8TDW5 730 aaPredicted RBP8.64□□□□□ -1.03
CPNE1-226ENST00000486021 CDHR1Q96JP9 859 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 PPP1R12CQ9BZL4 782 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 TSPYL2Q9H2G4 693 aaPredicted RBP8.64□□□□□ -1.03
CPNE1-226ENST00000486021 RIOX1Q9H6W3 641 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 MLXIPQ9HAP2 919 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 ANO2Q9NQ90 1003 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 PXMP2Q9NR77 195 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 PDGFCQ9NRA1 345 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 RBM28Q9NW13 759 aaKnown RBP8.64□□□□□ -1.03
CPNE1-226ENST00000486021 MAD2L2Q9UI95 211 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 SLC12A7Q9Y666 1083 aa8.64□□□□□ -1.03
CPNE1-226ENST00000486021 TRIOBPQ9H2D6 2365 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 CCDC196A0A1B0GTZ2 297 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 MYADML2A6NDP7 307 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 hCG_1984214I3L0E3 225 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 NOP56O00567 594 aaKnown RBP8.63□□□□□ -1.03
CPNE1-226ENST00000486021 MAFGO15525 162 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 PPFIA4O75335 1185 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 RPLP2P05387 115 aaKnown RBP8.63□□□□□ -1.03
CPNE1-226ENST00000486021 MYCLP12524 364 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-226ENST00000486021 IRX6P78412 446 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-226ENST00000486021 GHRHRQ02643 423 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 MCTP2Q6DN12 878 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 STOX1Q6ZVD7 989 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 CYB5R4Q7L1T6 521 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms