RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 PALM3A6NDB9 673 aaPredicted RBP10.98□□□□□ -0.65
NUP50-215ENST00000484186 A6NJR5 290 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 E7EWF7 191 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 IFIT3O14879 490 aaKnown RBP10.98□□□□□ -0.65
NUP50-215ENST00000484186 ZBTB5O15062 677 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 KPNA6O60684 536 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 STXBP2Q15833 593 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 PSRC1Q6PGN9 363 aaPredicted RBP10.98□□□□□ -0.65
NUP50-215ENST00000484186 ZNF365Q70YC5 407 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 RALYLQ86SE5 291 aaKnown RBP10.98□□□□□ -0.65
NUP50-215ENST00000484186 NCOA7Q8NI08 942 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 COPS5Q92905 334 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 MAP4K1Q92918 833 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 MTMR8Q96EF0 704 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 RMDN3Q96TC7 470 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 CDX2Q99626 313 aaPredicted RBP10.98□□□□□ -0.65
NUP50-215ENST00000484186 MTG1Q9BT17 334 aaPredicted RBP10.98□□□□□ -0.65
NUP50-215ENST00000484186 NOC4LQ9BVI4 516 aaKnown RBP10.98□□□□□ -0.65
NUP50-215ENST00000484186 ALDH8A1Q9H2A2 487 aaPredicted RBP10.98□□□□□ -0.65
NUP50-215ENST00000484186 TTYH1Q9H313 450 aaPredicted RBP10.98□□□□□ -0.65
NUP50-215ENST00000484186 IL23AQ9NPF7 189 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 COL20A1Q9P218 1284 aa10.98□□□□□ -0.65
NUP50-215ENST00000484186 ARIH2O95376 493 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 CFBP00751 764 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 FGBP02675 491 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 SUPT20HL2P0C7V6 817 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 ACRP10323 421 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 CCL23P55773 120 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 GRM4Q14833 912 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 WTAPQ15007 396 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 SART3Q15020 963 aaKnown RBP10.97□□□□□ -0.65
NUP50-215ENST00000484186 NBPF20Q3BBV1 942 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 RASIP1Q5U651 963 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 ARHGEF16Q5VV41 709 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 CCDC62Q6P9F0 684 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 SEPT14Q6ZU15 432 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 SAMD3Q8N6K7 520 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 RIOX1Q9H6W3 641 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 MAP3K20Q9NYL2 800 aaKnown RBP10.97□□□□□ -0.65
NUP50-215ENST00000484186 UMODL1Q5DID0 1318 aa10.97□□□□□ -0.65
NUP50-215ENST00000484186 OPLAHO14841 1288 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 PPP1R11O60927 126 aaPredicted RBP10.96□□□□□ -0.65
NUP50-215ENST00000484186 EIF3JO75822 258 aaKnown RBP10.96□□□□□ -0.65
NUP50-215ENST00000484186 GH1P01241 217 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 NR3C2P08235 984 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 EIF2AK2P19525 551 aaKnown RBP10.96□□□□□ -0.65
NUP50-215ENST00000484186 DNAJB2P25686 324 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 HSD17B4P51659 736 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 GHRHRQ02643 423 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 TRAF1Q13077 416 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 LY6KQ17RY6 165 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 NFRKBQ6P4R8 1299 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 STOX1Q6ZVD7 989 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 CHST3Q7LGC8 479 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 RPUSD2Q8IZ73 545 aaKnown RBP10.96□□□□□ -0.65
NUP50-215ENST00000484186 IGDCC4Q8TDY8 1250 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 HERVK_113Q902F9 699 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 WNT8AQ9H1J5 351 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 SENP2Q9HC62 589 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 PXMP2Q9NR77 195 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 TRMT13Q9NUP7 481 aaKnown RBP10.96□□□□□ -0.65
NUP50-215ENST00000484186 PCDHA1Q9Y5I3 950 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 TAF6LQ9Y6J9 622 aa10.96□□□□□ -0.65
NUP50-215ENST00000484186 CYP2C9P11712 490 aa10.95□□□□□ -0.66
NUP50-215ENST00000484186 ANTXR2P58335 489 aa10.95□□□□□ -0.66
NUP50-215ENST00000484186 PTPN11Q06124 597 aaPredicted RBP10.95□□□□□ -0.66
NUP50-215ENST00000484186 TROAPQ12815 778 aa10.95□□□□□ -0.66
NUP50-215ENST00000484186 SLC35G1Q2M3R5 365 aa10.95□□□□□ -0.66
NUP50-215ENST00000484186 FAM47CQ5HY64 1035 aa10.95□□□□□ -0.66
NUP50-215ENST00000484186 TMEM67Q5HYA8 995 aa10.95□□□□□ -0.66
NUP50-215ENST00000484186 HOMER1Q86YM7 354 aa10.95□□□□□ -0.66
NUP50-215ENST00000484186 MB21D2Q8IYB1 491 aaPredicted RBP10.95□□□□□ -0.66
NUP50-215ENST00000484186 AFG1LQ8WV93 481 aa10.95□□□□□ -0.66
NUP50-215ENST00000484186 MYLIPQ8WY64 445 aa10.95□□□□□ -0.66
NUP50-215ENST00000484186 PIGSQ96S52 555 aa10.95□□□□□ -0.66
NUP50-215ENST00000484186 MTIF3Q9H2K0 278 aaKnown RBP10.95□□□□□ -0.66
NUP50-215ENST00000484186 DDX41Q9UJV9 622 aaKnown RBP10.95□□□□□ -0.66
NUP50-215ENST00000484186 RBM8AQ9Y5S9 174 aaKnown RBP10.95□□□□□ -0.66
NUP50-215ENST00000484186 PNMA6FA0A0J9YX94 578 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 GRXCR1A8MXD5 290 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 DLL1O00548 723 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 CYTH3O43739 400 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 MMP3P08254 477 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 CASTP20810 708 aaKnown RBP10.94□□□□□ -0.66
NUP50-215ENST00000484186 ARHGAP1Q07960 439 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 GRIN2CQ14957 1233 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 OTOP2Q7RTS6 562 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 CATIPQ7Z7H3 387 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 PPP1R13LQ8WUF5 828 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 TIFAQ96CG3 184 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 SCLYQ96I15 445 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 PDCD2LQ9BRP1 358 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 MTA3Q9BTC8 594 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 PBX4Q9BYU1 374 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 ZNF576Q9H609 170 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 CXXC1Q9P0U4 656 aaPredicted RBP10.94□□□□□ -0.66
NUP50-215ENST00000484186 MRVI1Q9Y6F6 885 aa10.94□□□□□ -0.66
NUP50-215ENST00000484186 COL6A3P12111 3177 aa10.93□□□□□ -0.66
NUP50-215ENST00000484186 GCOM1H8Y6P7 765 aaPredicted RBP10.93□□□□□ -0.66
NUP50-215ENST00000484186 POLR2MP0CAP2 368 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms