RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 IWS1Q96ST2 819 aa12.46□□□□□ -0.41
ATG4B-219ENST00000479941 DDX20Q9UHI6 824 aaKnown RBP12.46□□□□□ -0.41
ATG4B-219ENST00000479941 ZHX1Q9UKY1 873 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-219ENST00000479941 POTEFA5A3E0 1075 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 SMCO2A6NFE2 343 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 STXBP3O00186 592 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 AKR1A1P14550 325 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 SOX10P56693 466 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 PDE4DQ08499 809 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 LHX8Q68G74 356 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 TYW1BQ6NUM6 668 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 USP17L6PQ6QN14 398 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 KATNBL1Q9H079 304 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 VTA1Q9NP79 307 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 RIC8AQ9NPQ8 531 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 PXMP2Q9NR77 195 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 SH2B1Q9NRF2 756 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-219ENST00000479941 FAM184BQ9ULE4 1060 aa12.45□□□□□ -0.42
ATG4B-219ENST00000479941 RBBP6Q7Z6E9 1792 aaKnown RBP12.45□□□□□ -0.42
ATG4B-219ENST00000479941 MKI67P46013 3256 aaKnown RBP12.44□□□□□ -0.42
ATG4B-219ENST00000479941 STK36Q9NRP7 1315 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 ESYT2A0FGR8 921 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 PPFIA3O75145 1194 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 CAPN15O75808 1086 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 LARGE1O95461 756 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 TFRCP02786 760 aaKnown RBP12.44□□□□□ -0.42
ATG4B-219ENST00000479941 EIF2AK2P19525 551 aaKnown RBP12.44□□□□□ -0.42
ATG4B-219ENST00000479941 GNA11P29992 359 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 MCM2P49736 904 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 ADCY7P51828 1080 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 STXBP2Q15833 593 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 FCHSD1Q86WN1 690 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 FAM177A1Q8N128 213 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-219ENST00000479941 NECAB1Q8N987 351 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 CCDC148Q8NFR7 591 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 PDCD2LQ9BRP1 358 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 CRISPLD2Q9H0B8 497 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 SH3GLB2Q9NR46 395 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 OGDHLQ9ULD0 1010 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 LCTP09848 1927 aa12.44□□□□□ -0.42
ATG4B-219ENST00000479941 SPDYE3A6NKU9 549 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 EIF3JO75822 258 aaKnown RBP12.43□□□□□ -0.42
ATG4B-219ENST00000479941 CTDNEP1O95476 244 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 FOSP01100 380 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-219ENST00000479941 NR3C2P08235 984 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 RARBP10826 455 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 EN2P19622 333 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-219ENST00000479941 PGM5Q15124 567 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 CCDC144BQ3MJ40 725 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 TAPT1Q6NXT6 567 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 EEPD1Q7L9B9 569 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 VSIG10LQ86VR7 867 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 FBXO16Q8IX29 292 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-219ENST00000479941 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 WASF1Q92558 559 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 C6orf50Q9HD87 102 aa12.43□□□□□ -0.42
ATG4B-219ENST00000479941 DDX49Q9Y6V7 483 aaKnown RBP12.43□□□□□ -0.42
ATG4B-219ENST00000479941 FRMPD4Q14CM0 1322 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 MCM3APO60318 1980 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 RBM47A0AV96 593 aaKnown RBP12.42□□□□□ -0.42
ATG4B-219ENST00000479941 DUSP11O75319 330 aaKnown RBP12.42□□□□□ -0.42
ATG4B-219ENST00000479941 XBP1P17861 261 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 UBE2SQ16763 222 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 MCTP2Q6DN12 878 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 IQSEC1Q6DN90 963 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 XRRA1Q6P2D8 792 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 NSUN7Q8NE18 718 aaKnown RBP12.42□□□□□ -0.42
ATG4B-219ENST00000479941 BICD2Q8TD16 824 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 SHISA4Q96DD7 197 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
ATG4B-219ENST00000479941 EHMT1Q9H9B1 1298 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 VPS54Q9P1Q0 977 aa12.42□□□□□ -0.42
ATG4B-219ENST00000479941 ORC3Q9UBD5 711 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-219ENST00000479941 STAM2O75886 525 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 MYCLP12524 364 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-219ENST00000479941 CCND2P30279 289 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 ADCYAP1R1P41586 468 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 CLK2P49760 499 aaKnown RBP12.41□□□□□ -0.42
ATG4B-219ENST00000479941 RGS19P49795 217 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 TNFAIP2Q03169 654 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 AP3B2Q13367 1082 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 CCDC83Q8IWF9 413 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 ARRDC4Q8NCT1 418 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 SCFD2Q8WU76 684 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 XPNPEP3Q9NQH7 507 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 PDGFCQ9NRA1 345 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 PCDHA6Q9UN73 950 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 PCDHA8Q9Y5H6 950 aa12.41□□□□□ -0.42
ATG4B-219ENST00000479941 NKRFO15226 690 aaKnown RBP eCLIP12.4□□□□□ -0.42
ATG4B-219ENST00000479941 FDPSP14324 419 aaKnown RBP12.4□□□□□ -0.42
ATG4B-219ENST00000479941 NLRP5P59047 1200 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 ST3GAL1Q11201 340 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 TTLL4Q14679 1199 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 DUSP28Q4G0W2 176 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 ANO1Q5XXA6 986 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 PCNX4Q63HM2 1172 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 GALNT17Q6IS24 598 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 KCNV1Q6PIU1 500 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 RNF180Q86T96 592 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms