RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 SMCO2A6NFE2 343 aa11.94□□□□□ -0.5
LSS-208ENST00000474319 TULP2O00295 520 aa11.94□□□□□ -0.5
LSS-208ENST00000474319 ZNF263O14978 683 aa11.94□□□□□ -0.5
LSS-208ENST00000474319 SYF2O95926 243 aaKnown RBP11.94□□□□□ -0.5
LSS-208ENST00000474319 BMP15O95972 392 aa11.94□□□□□ -0.5
LSS-208ENST00000474319 RCSD1Q6JBY9 416 aa11.94□□□□□ -0.5
LSS-208ENST00000474319 TRMT1LQ7Z2T5 733 aaKnown RBP11.94□□□□□ -0.5
LSS-208ENST00000474319 LRRC47Q8N1G4 583 aaKnown RBP11.94□□□□□ -0.5
LSS-208ENST00000474319 CCDC51Q96ER9 411 aa11.94□□□□□ -0.5
LSS-208ENST00000474319 PCDHA4Q9UN74 947 aa11.94□□□□□ -0.5
LSS-208ENST00000474319 ITGB4P16144 1822 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 ATP2C2O75185 946 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 CALM1P0DP23 149 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 CALM2P0DP24 149 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 CALM3P0DP25 149 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 CACNB3P54284 484 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 TRADDQ15628 312 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 MAP9Q49MG5 647 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 KLHL7Q8IXQ5 586 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 FAM71BQ8TC56 605 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 RBM17Q96I25 401 aaKnown RBP11.93□□□□□ -0.5
LSS-208ENST00000474319 DUSP9Q99956 384 aaKnown RBP11.93□□□□□ -0.5
LSS-208ENST00000474319 STK32BQ9NY57 414 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 BAZ2AQ9UIF9 1905 aaKnown RBP11.93□□□□□ -0.5
LSS-208ENST00000474319 LDHBP07195 334 aaKnown RBP11.93□□□□□ -0.5
LSS-208ENST00000474319 KRT83P78385 493 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 PDCLQ13371 301 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 GRAPQ13588 217 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 SF3B3Q15393 1217 aaKnown RBP11.93□□□□□ -0.5
LSS-208ENST00000474319 MFSD14BQ5SR56 506 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 SOGA3Q5TF21 947 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 ZSCAN29Q8IWY8 852 aaPredicted RBP11.93□□□□□ -0.5
LSS-208ENST00000474319 GRAPLQ8TC17 118 aaPredicted RBP11.93□□□□□ -0.5
LSS-208ENST00000474319 P2RX5Q93086 422 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 PIGSQ96S52 555 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 BCCIPQ9P287 314 aaKnown RBP eCLIP11.93□□□□□ -0.5
LSS-208ENST00000474319 ATRNO75882 1429 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 LRRC53A6NM62 1247 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 KRT14P02533 472 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 HPDP32754 393 aaPredicted RBP11.93□□□□□ -0.5
LSS-208ENST00000474319 SPTY2D1Q68D10 685 aaPredicted RBP11.93□□□□□ -0.5
LSS-208ENST00000474319 DPP8Q6V1X1 898 aaPredicted RBP11.93□□□□□ -0.5
LSS-208ENST00000474319 KIAA0825Q8IV33 1275 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
LSS-208ENST00000474319 COL1A1P02452 1464 aaPredicted RBP11.92□□□□□ -0.5
LSS-208ENST00000474319 GNGT1P63211 74 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 TCP10Q12799 353 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 UBE2SQ16763 222 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 CCDC47Q96A33 483 aaKnown RBP11.92□□□□□ -0.5
LSS-208ENST00000474319 NUDT12Q9BQG2 462 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 RASSF10A6NK89 507 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 DDAH1O94760 285 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 TDP2O95551 362 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 CALML3P27482 149 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 MAGEA1P43355 309 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 UBE4AQ14139 1066 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 TTI2Q6NXR4 508 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 FAM76AQ8TAV0 307 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 BCAS4Q8TDM0 211 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 NOC3LQ8WTT2 800 aaKnown RBP11.92□□□□□ -0.5
LSS-208ENST00000474319 ARL8AQ96BM9 186 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.92□□□□□ -0.55e-7■■■■■ 41.8
LSS-208ENST00000474319 KCNQ5Q9NR82 932 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 SALL4Q9UJQ4 1053 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 GLI3P10071 1580 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 KLRC4O43908 158 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 SLC16A2P36021 539 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 LONP1P36776 959 aaKnown RBP11.92□□□□□ -0.5
LSS-208ENST00000474319 SLC1A4P43007 532 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 DNM2P50570 870 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 CCDC40Q4G0X9 1142 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 TICAM2Q86XR7 235 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 ANKRD2Q9GZV1 360 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 CAPN11Q9UMQ6 739 aa11.92□□□□□ -0.5
LSS-208ENST00000474319 NPHP3-ACAD11A0A0J9YXS1 232 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 C21orf2O43822 256 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 KIF11P52732 1056 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 CCDC70Q6NSX1 233 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 ADAT2Q7Z6V5 191 aaKnown RBP11.91□□□□□ -0.5
LSS-208ENST00000474319 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 TRIM9Q9C026 710 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 BCS1LQ9Y276 419 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 TRAF5O00463 557 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 HLTFQ14527 1009 aaKnown RBP eCLIP11.91□□□□□ -0.5
LSS-208ENST00000474319 ARHGAP20Q9P2F6 1191 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 NFU1Q9UMS0 254 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 PCDHA13Q9Y5I0 950 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 TACC1O75410 805 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 OR52Z1P0C646 297 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 TAL1P17542 331 aaPredicted RBP11.91□□□□□ -0.5
LSS-208ENST00000474319 GUCY2DQ02846 1103 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 EHHADHQ08426 723 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 RAPGEF1Q13905 1077 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 C4orf32Q8N8J7 132 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 TSEN2Q8NCE0 465 aaKnown RBP11.91□□□□□ -0.5
LSS-208ENST00000474319 HNRNPLLQ8WVV9 542 aaKnown RBP11.91□□□□□ -0.5
LSS-208ENST00000474319 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
LSS-208ENST00000474319 BRIP1Q9BX63 1249 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms