RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 TBC1D5Q92609 795 aa16.91■□□□□ 0.3
TARDBP-204ENST00000472476 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
TARDBP-204ENST00000472476 KIAA1217Q5T5P2 1943 aa16.91■□□□□ 0.3
TARDBP-204ENST00000472476 A0A0D9SFI3 127 aa16.9■□□□□ 0.3
TARDBP-204ENST00000472476 PITPNM1O00562 1244 aa16.9■□□□□ 0.3
TARDBP-204ENST00000472476 LPXNO60711 386 aa16.9■□□□□ 0.3
TARDBP-204ENST00000472476 ZNF543Q08ER8 600 aa16.9■□□□□ 0.3
TARDBP-204ENST00000472476 PHOSPHO2Q8TCD6 241 aa16.9■□□□□ 0.3
TARDBP-204ENST00000472476 HELLSQ9NRZ9 838 aa16.9■□□□□ 0.3
TARDBP-204ENST00000472476 NKRFO15226 690 aaKnown RBP eCLIP16.89■□□□□ 0.29
TARDBP-204ENST00000472476 TLL1O43897 1013 aa16.89■□□□□ 0.29
TARDBP-204ENST00000472476 RFC2P35250 354 aa16.89■□□□□ 0.29
TARDBP-204ENST00000472476 TCTN1Q2MV58 587 aa16.89■□□□□ 0.29
TARDBP-204ENST00000472476 ZNF589Q86UQ0 364 aaPredicted RBP16.89■□□□□ 0.29
TARDBP-204ENST00000472476 HERC6Q8IVU3 1022 aa16.89■□□□□ 0.29
TARDBP-204ENST00000472476 DNERQ8NFT8 737 aa16.89■□□□□ 0.29
TARDBP-204ENST00000472476 SCFD2Q8WU76 684 aa16.89■□□□□ 0.29
TARDBP-204ENST00000472476 KAT2BQ92831 832 aa16.89■□□□□ 0.29
TARDBP-204ENST00000472476 EVI5LQ96CN4 794 aa16.89■□□□□ 0.29
TARDBP-204ENST00000472476 SLC9A7Q96T83 725 aa16.89■□□□□ 0.29
TARDBP-204ENST00000472476 CPVLQ9H3G5 476 aa16.89■□□□□ 0.29
TARDBP-204ENST00000472476 TXNP10599 105 aaKnown RBP16.88■□□□□ 0.29
TARDBP-204ENST00000472476 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
TARDBP-204ENST00000472476 PTPN11Q06124 597 aaPredicted RBP16.88■□□□□ 0.29
TARDBP-204ENST00000472476 PDE4DQ08499 809 aa16.88■□□□□ 0.29
TARDBP-204ENST00000472476 PPP2R5BQ15173 497 aa16.88■□□□□ 0.29
TARDBP-204ENST00000472476 FAM47CQ5HY64 1035 aa16.88■□□□□ 0.29
TARDBP-204ENST00000472476 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
TARDBP-204ENST00000472476 RGS22Q8NE09 1264 aa16.88■□□□□ 0.29
TARDBP-204ENST00000472476 DHX38Q92620 1227 aaKnown RBP16.88■□□□□ 0.29
TARDBP-204ENST00000472476 TTC14Q96N46 770 aa16.88■□□□□ 0.29
TARDBP-204ENST00000472476 GPHNQ9NQX3 736 aaPredicted RBP16.88■□□□□ 0.29
TARDBP-204ENST00000472476 COL20A1Q9P218 1284 aa16.88■□□□□ 0.29
TARDBP-204ENST00000472476 WDR19Q8NEZ3 1342 aa16.88■□□□□ 0.29
TARDBP-204ENST00000472476 MYH7BA7E2Y1 1941 aa16.88■□□□□ 0.29
TARDBP-204ENST00000472476 COL4A4P53420 1690 aaPredicted RBP16.88■□□□□ 0.29
TARDBP-204ENST00000472476 KPNA6O60684 536 aa16.87■□□□□ 0.29
TARDBP-204ENST00000472476 PDE1AP54750 535 aa16.87■□□□□ 0.29
TARDBP-204ENST00000472476 HAND2P61296 217 aa16.87■□□□□ 0.29
TARDBP-204ENST00000472476 MCMDC2Q4G0Z9 681 aa16.87■□□□□ 0.29
TARDBP-204ENST00000472476 GDF6Q6KF10 455 aaPredicted RBP16.87■□□□□ 0.29
TARDBP-204ENST00000472476 TMCO2Q7Z6W1 182 aaPredicted RBP16.87■□□□□ 0.29
TARDBP-204ENST00000472476 TBC1D10CQ8IV04 446 aa16.87■□□□□ 0.29
TARDBP-204ENST00000472476 TSPYL2Q9H2G4 693 aaPredicted RBP16.87■□□□□ 0.29
TARDBP-204ENST00000472476 LCHNA4D1U4 455 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 GOLGA8HP0CJ92 632 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 ACTN1P12814 892 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 ARHGAP1Q07960 439 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 GRB10Q13322 594 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 RETREG2Q8NC44 543 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 AFG1LQ8WV93 481 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 ARNTL2Q8WYA1 636 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 KHSRPQ92945 711 aaKnown RBP eCLIP16.86■□□□□ 0.291e-9■□□□□ 10.4
TARDBP-204ENST00000472476 TAAR1Q96RJ0 339 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 UBA5Q9GZZ9 404 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 EPHX3Q9H6B9 360 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 TOMM22Q9NS69 142 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 ZMYM6O95789 1325 aa16.86■□□□□ 0.29
TARDBP-204ENST00000472476 NMIQ13287 307 aaPredicted RBP16.85■□□□□ 0.29
TARDBP-204ENST00000472476 BFSP2Q13515 415 aa16.85■□□□□ 0.29
TARDBP-204ENST00000472476 PTGISQ16647 500 aa16.85■□□□□ 0.29
TARDBP-204ENST00000472476 LY6KQ17RY6 165 aa16.85■□□□□ 0.29
TARDBP-204ENST00000472476 ANKRD45Q5TZF3 282 aa16.85■□□□□ 0.29
TARDBP-204ENST00000472476 TRAF7Q6Q0C0 670 aa16.85■□□□□ 0.29
TARDBP-204ENST00000472476 SESTD1Q86VW0 696 aa16.85■□□□□ 0.29
TARDBP-204ENST00000472476 SYTL5Q8TDW5 730 aaPredicted RBP16.85■□□□□ 0.29
TARDBP-204ENST00000472476 FTOQ9C0B1 505 aaKnown RBP eCLIP16.85■□□□□ 0.29
TARDBP-204ENST00000472476 MYH6P13533 1939 aa16.85■□□□□ 0.29
TARDBP-204ENST00000472476 NBNO60934 754 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 MMP3P08254 477 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 PLA2G5P39877 138 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 WDR5P61964 334 aaKnown RBP16.84■□□□□ 0.29
TARDBP-204ENST00000472476 DEFB103AP81534 67 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 RBL2Q08999 1139 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 SKIV2LQ15477 1246 aaKnown RBP16.84■□□□□ 0.29
TARDBP-204ENST00000472476 AAK1Q2M2I8 961 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 USH1GQ495M9 461 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 BRDTQ58F21 947 aaPredicted RBP16.84■□□□□ 0.29
TARDBP-204ENST00000472476 IL27Q8NEV9 243 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 ZKSCAN3Q9BRR0 538 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 PNMA2Q9UL42 364 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 COG5Q9UP83 839 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 RAD50Q92878 1312 aa16.84■□□□□ 0.29
TARDBP-204ENST00000472476 GTPBP6O43824 516 aaPredicted RBP16.83■□□□□ 0.28
TARDBP-204ENST00000472476 BAIAP3O94812 1187 aa16.83■□□□□ 0.28
TARDBP-204ENST00000472476 CXCL10P02778 98 aa16.83■□□□□ 0.28
TARDBP-204ENST00000472476 NEDD4P46934 1319 aa16.83■□□□□ 0.28
TARDBP-204ENST00000472476 TRIM71Q2Q1W2 868 aaKnown RBP16.83■□□□□ 0.28
TARDBP-204ENST00000472476 AFAP1L1Q8TED9 768 aa16.83■□□□□ 0.28
TARDBP-204ENST00000472476 WNT8BQ93098 351 aa16.83■□□□□ 0.28
TARDBP-204ENST00000472476 CD320Q9NPF0 282 aa16.83■□□□□ 0.28
TARDBP-204ENST00000472476 SELPP16109 830 aa16.82■□□□□ 0.28
TARDBP-204ENST00000472476 HIC1Q14526 733 aa16.82■□□□□ 0.28
TARDBP-204ENST00000472476 MBTPS1Q14703 1052 aa16.82■□□□□ 0.28
TARDBP-204ENST00000472476 MFSD6Q6ZSS7 791 aa16.82■□□□□ 0.28
TARDBP-204ENST00000472476 SEPT14Q6ZU15 432 aa16.82■□□□□ 0.28
TARDBP-204ENST00000472476 DGKHQ86XP1 1220 aa16.82■□□□□ 0.28
TARDBP-204ENST00000472476 TICAM2Q86XR7 235 aa16.82■□□□□ 0.28
TARDBP-204ENST00000472476 CAGE1Q8TC20 777 aa16.82■□□□□ 0.28
TARDBP-204ENST00000472476 ANKS1AQ92625 1134 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms