RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 FBXO28Q9NVF7 368 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 ABCB11O95342 1321 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 PTPRFP10586 1907 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 USP17L15C9J2P7 530 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 USP17L13C9JLJ4 530 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 USP17L11C9JVI0 530 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 USP17L18D6R9N7 530 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 USP17L22D6RA61 530 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 USP17L17D6RBQ6 530 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 USP17L19D6RCP7 530 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 USP17L20D6RJB6 530 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 TRAF5O00463 557 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 CXCL11O14625 94 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 ZBED4O75132 1171 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 PPP6R2O75170 966 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 USP17L24Q0WX57 530 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 PPIL2Q13356 520 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 DGKZQ13574 1117 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 PTPAQ15257 358 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 EARS2Q5JPH6 523 aaKnown RBP9.33□□□□□ -0.92
RPA3-205ENST00000462723 LDLRAD1Q5T700 205 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 LCE2AQ5TA79 106 aaPredicted RBP9.33□□□□□ -0.92
RPA3-205ENST00000462723 JAKMIP3Q5VZ66 844 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 MOB2Q70IA6 237 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 RASGRP4Q8TDF6 673 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 CLMNQ96JQ2 1002 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 BIN2Q9UBW5 565 aaPredicted RBP9.33□□□□□ -0.92
RPA3-205ENST00000462723 PPP1R9AQ9ULJ8 1098 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 MRPL11Q9Y3B7 192 aaKnown RBP9.33□□□□□ -0.92
RPA3-205ENST00000462723 PCDHB6Q9Y5E3 794 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 PARP14Q460N5 1801 aa9.33□□□□□ -0.92
RPA3-205ENST00000462723 A0A1W2PQ27 194 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 A0A1W2PQ64 194 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 A0A1W2PQD8 194 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 ADAMTS3O15072 1205 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 CUTAO60888 179 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 ICAM1P05362 532 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 COG2Q14746 738 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 INF2Q27J81 1249 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 NOM1Q5C9Z4 860 aaKnown RBP9.32□□□□□ -0.92
RPA3-205ENST00000462723 ADALQ6DHV7 355 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 CAVIN1Q6NZI2 390 aaKnown RBP9.32□□□□□ -0.92
RPA3-205ENST00000462723 CCDC73Q6ZRK6 1079 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 PACS2Q86VP3 889 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 C2orf69Q8N8R5 385 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 SLC10A4Q96EP9 437 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 PGBD1Q96JS3 809 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 SLC38A10Q9HBR0 1119 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 TMEM260Q9NX78 707 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 CCPG1Q9ULG6 757 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 PCDHA7Q9UN72 937 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 MORC2Q9Y6X9 1032 aaPredicted RBP9.32□□□□□ -0.92
RPA3-205ENST00000462723 LOC285556D6RIA3 1793 aa9.32□□□□□ -0.92
RPA3-205ENST00000462723 MYPNQ86TC9 1320 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 A0A0G2JLL6 359 aaPredicted RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 IRF6O14896 467 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 CELF2O95319 508 aaKnown RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 FOSP01100 380 aaPredicted RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 MARCKSP29966 332 aaPredicted RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 CLK2P49760 499 aaKnown RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 AP3B2Q13367 1082 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 ORC2Q13416 577 aaPredicted RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 ZNF174Q15697 407 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 UBE2SQ16763 222 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 GADL1Q6ZQY3 521 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 CATSPERGQ6ZRH7 1159 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 TRIM67Q6ZTA4 783 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 FASTKD5Q7L8L6 764 aaKnown RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 PRRT2Q7Z6L0 340 aaPredicted RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 NEK8Q86SG6 692 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 CCAR1Q8IX12 1150 aaKnown RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 PROCA1Q8NCQ7 364 aaPredicted RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 TBCKQ8TEA7 893 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 MRPS27Q92552 414 aaKnown RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 FERMT2Q96AC1 680 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 OPTNQ96CV9 577 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 NAP1L4Q99733 375 aaKnown RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 GZF1Q9H116 711 aaPredicted RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 GBA2Q9HCG7 927 aaPredicted RBP9.31□□□□□ -0.92
RPA3-205ENST00000462723 HOXC10Q9NYD6 342 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 KCNH4Q9UQ05 1017 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 RLFQ13129 1914 aa9.31□□□□□ -0.92
RPA3-205ENST00000462723 TRPM7Q96QT4 1865 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 SPDYE3A6NKU9 549 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 GCOM1H8Y6P7 765 aaPredicted RBP9.3□□□□□ -0.92
RPA3-205ENST00000462723 PIK3CDO00329 1044 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 LAD1O00515 517 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 VWA5AO00534 786 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 MEIS2O14770 477 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 DGAT1O75907 488 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 POLR2MP0CAP2 368 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 CMA1P23946 247 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 MCM7P33993 719 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 OAZ1P54368 228 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 ATP2C1P98194 919 aaPredicted RBP9.3□□□□□ -0.92
RPA3-205ENST00000462723 PTGDRQ13258 359 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 PABPC4Q13310 644 aaKnown RBP eCLIP9.3□□□□□ -0.92
RPA3-205ENST00000462723 SNAPC2Q13487 334 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 LETM2Q2VYF4 491 aa9.3□□□□□ -0.92
RPA3-205ENST00000462723 PKDCCQ504Y2 493 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms