RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 GCOM1H8Y6P7 765 aaPredicted RBP9.07□□□□□ -0.96
SFPQ-202ENST00000460428 ATP2A1O14983 1001 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 KLRC4O43908 158 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 RAD21O60216 631 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 ZNF500O60304 480 aaPredicted RBP9.07□□□□□ -0.96
SFPQ-202ENST00000460428 RHOBTB3O94955 611 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 POLR2MP0CAP2 368 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 PTPRAP18433 802 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 CDC25AP30304 524 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 CLCN1P35523 988 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 TXKP42681 527 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 AFMP43652 599 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 HSD17B4P51659 736 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 OAZ1P54368 228 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 AMPD3Q01432 767 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 SPIRE1Q08AE8 756 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 IKQ13123 557 aaPredicted RBP9.07□□□□□ -0.96
SFPQ-202ENST00000460428 GRB10Q13322 594 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 DHX8Q14562 1220 aaKnown RBP9.07□□□□□ -0.96
SFPQ-202ENST00000460428 FOXR2Q6PJQ5 311 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 LDHDQ86WU2 507 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 GRAMD1CQ8IYS0 662 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 ZNF280CQ8ND82 737 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 ZC3H15Q8WU90 426 aaKnown RBP9.07□□□□□ -0.96
SFPQ-202ENST00000460428 CALML4Q96GE6 196 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 PNMA5Q96PV4 448 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 LRRC27Q9C0I9 530 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 TTC12Q9H892 705 aaPredicted RBP9.07□□□□□ -0.96
SFPQ-202ENST00000460428 BLOC1S4Q9NUP1 217 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 PPP1R9AQ9ULJ8 1098 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 PCDHA12Q9UN75 941 aa9.07□□□□□ -0.96
SFPQ-202ENST00000460428 MYPNQ86TC9 1320 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 PARP14Q460N5 1801 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 IGLV3-22A0A075B6J6 115 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 PVALEFA0A1B0GWK0 134 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 USP2O75604 605 aaPredicted RBP9.06□□□□□ -0.96
SFPQ-202ENST00000460428 RPN1P04843 607 aaKnown RBP9.06□□□□□ -0.96
SFPQ-202ENST00000460428 YBX3P16989 372 aaKnown RBP eCLIP9.06□□□□□ -0.96
SFPQ-202ENST00000460428 PLCG1P19174 1290 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 PPP1R2P41236 205 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 USH1GQ495M9 461 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 SPATA1Q5VX52 437 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 KRT79Q5XKE5 535 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 USP50Q70EL3 339 aaPredicted RBP9.06□□□□□ -0.96
SFPQ-202ENST00000460428 MCF2L2Q86YR7 1114 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 GIMAP8Q8ND71 665 aaPredicted RBP9.06□□□□□ -0.96
SFPQ-202ENST00000460428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.06□□□□□ -0.96
SFPQ-202ENST00000460428 CLEC4DQ8WXI8 215 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 KIFC2Q96AC6 838 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 TRIM9Q9C026 710 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 EHMT1Q9H9B1 1298 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 FBXO28Q9NVF7 368 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 GGA3Q9NZ52 723 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.06□□□□□ -0.96
SFPQ-202ENST00000460428 IMPACTQ9P2X3 320 aa9.06□□□□□ -0.96
SFPQ-202ENST00000460428 FRMPD4Q14CM0 1322 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 RPTORQ8N122 1335 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 KDM3AQ9Y4C1 1321 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 RLFQ13129 1914 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 LRRC10BA6NIK2 292 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 FAM86B1E9PN63 330 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 CBFA2T2O43439 604 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 DDNO94850 711 aaPredicted RBP9.05□□□□□ -0.96
SFPQ-202ENST00000460428 FAM86B2P0C5J1 330 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 BCRP11274 1271 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 CD44P16070 742 aaKnown RBP9.05□□□□□ -0.96
SFPQ-202ENST00000460428 VCAM1P19320 739 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 MUTP22033 750 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 LMOD1P29536 600 aaPredicted RBP9.05□□□□□ -0.96
SFPQ-202ENST00000460428 SNAP25P60880 206 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 FANCCQ00597 558 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 FMR1Q06787 632 aaKnown RBP eCLIP9.05□□□□□ -0.96
SFPQ-202ENST00000460428 EHHADHQ08426 723 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 SPP2Q13103 211 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 ISM2Q6H9L7 571 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 B3GNT9Q6UX72 402 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 SV2BQ7L1I2 683 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 NIPA1Q7RTP0 329 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 CCDC84Q86UT8 332 aaPredicted RBP9.05□□□□□ -0.96
SFPQ-202ENST00000460428 ADSSL1Q8N142 457 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 REPS2Q8NFH8 660 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 RBM46Q8TBY0 533 aaKnown RBP9.05□□□□□ -0.96
SFPQ-202ENST00000460428 LARP4BQ92615 738 aaKnown RBP9.05□□□□□ -0.96
SFPQ-202ENST00000460428 RAD54LQ92698 747 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 WRNIP1Q96S55 665 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 FEZ1Q99689 392 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 NT5C3AQ9H0P0 336 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 RRAGDQ9NQL2 400 aaPredicted RBP9.05□□□□□ -0.96
SFPQ-202ENST00000460428 PICK1Q9NRD5 415 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 FANCLQ9NW38 375 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 RWDD2AQ9UIY3 292 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 SCAF8Q9UPN6 1271 aaKnown RBP9.05□□□□□ -0.96
SFPQ-202ENST00000460428 AFG3L2Q9Y4W6 797 aa9.05□□□□□ -0.96
SFPQ-202ENST00000460428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.04□□□□□ -0.96
SFPQ-202ENST00000460428 MEIS1O00470 390 aa9.04□□□□□ -0.96
SFPQ-202ENST00000460428 VWA5AO00534 786 aa9.04□□□□□ -0.96
SFPQ-202ENST00000460428 CASP1P29466 404 aa9.04□□□□□ -0.96
SFPQ-202ENST00000460428 DSG3P32926 999 aa9.04□□□□□ -0.96
SFPQ-202ENST00000460428 MAP3K9P80192 1104 aa9.04□□□□□ -0.96
SFPQ-202ENST00000460428 PLCB2Q00722 1185 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms