RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 FAM86B1E9PN63 330 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 FAM86B2P0C5J1 330 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 CDC25BP30305 580 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 MMP14P50281 582 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 PDE4CQ08493 712 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 ECM1Q16610 540 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 GPC2Q8N158 579 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 CRYGNQ8WXF5 182 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 DACH1Q9UI36 760 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 STAT3P40763 770 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 SPP2Q13103 211 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 AP3B2Q13367 1082 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 SNX29Q8TEQ0 813 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 CACTINQ8WUQ7 758 aaKnown RBP18.39■□□□□ 0.53
MBD1-210ENST00000457839 PNMA5Q96PV4 448 aa18.39■□□□□ 0.53
MBD1-210ENST00000457839 USP11P51784 963 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 UBASH3AP57075 661 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 SLC30A10Q6XR72 485 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 KCNK18Q7Z418 384 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 LDHDQ86WU2 507 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 CPXCR1Q8N123 301 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 ENOX1Q8TC92 643 aaKnown RBP18.38■□□□□ 0.53
MBD1-210ENST00000457839 CALML4Q96GE6 196 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 SYT17Q9BSW7 474 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 TANGO6Q9C0B7 1094 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 FEM1BQ9UK73 627 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 CTNND2Q9UQB3 1225 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 ATAD5Q96QE3 1844 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 GCFC2P16383 781 aaKnown RBP18.38■□□□□ 0.53
MBD1-210ENST00000457839 KMT5BQ4FZB7 885 aa18.38■□□□□ 0.53
MBD1-210ENST00000457839 KLRC4O43908 158 aa18.37■□□□□ 0.53
MBD1-210ENST00000457839 YBX3P16989 372 aaKnown RBP eCLIP18.37■□□□□ 0.53
MBD1-210ENST00000457839 CDK11BP21127 795 aaKnown RBP18.37■□□□□ 0.53
MBD1-210ENST00000457839 MCM6Q14566 821 aa18.37■□□□□ 0.53
MBD1-210ENST00000457839 TMC6Q7Z403 805 aa18.37■□□□□ 0.53
MBD1-210ENST00000457839 BLOC1S4Q9NUP1 217 aa18.37■□□□□ 0.53
MBD1-210ENST00000457839 RNF181Q9P0P0 153 aa18.37■□□□□ 0.53
MBD1-210ENST00000457839 PDIA5Q14554 519 aa18.37■□□□□ 0.53
MBD1-210ENST00000457839 FAM160B2Q86V87 743 aa18.37■□□□□ 0.53
MBD1-210ENST00000457839 CDK5RAP3Q96JB5 506 aa18.37■□□□□ 0.53
MBD1-210ENST00000457839 KCNMB3Q9NPA1 279 aa18.37■□□□□ 0.53
MBD1-210ENST00000457839 EMILIN3Q9NT22 766 aa18.37■□□□□ 0.53
MBD1-210ENST00000457839 SYNRGQ9UMZ2 1314 aa18.36■□□□□ 0.53
MBD1-210ENST00000457839 ZNF500O60304 480 aaPredicted RBP18.36■□□□□ 0.53
MBD1-210ENST00000457839 ERCC5P28715 1186 aaPredicted RBP18.36■□□□□ 0.53
MBD1-210ENST00000457839 SREBF1P36956 1147 aa18.36■□□□□ 0.53
MBD1-210ENST00000457839 PRCPP42785 496 aa18.36■□□□□ 0.53
MBD1-210ENST00000457839 KRT79Q5XKE5 535 aa18.36■□□□□ 0.53
MBD1-210ENST00000457839 HPS3Q969F9 1004 aa18.36■□□□□ 0.53
MBD1-210ENST00000457839 LENG9Q96B70 501 aa18.36■□□□□ 0.53
MBD1-210ENST00000457839 RAB34Q9BZG1 259 aa18.36■□□□□ 0.53
MBD1-210ENST00000457839 TRIM9Q9C026 710 aa18.36■□□□□ 0.53
MBD1-210ENST00000457839 KIAA1683Q9H0B3 1180 aa18.36■□□□□ 0.53
MBD1-210ENST00000457839 HOMER2Q9NSB8 354 aa18.36■□□□□ 0.53
MBD1-210ENST00000457839 FLOT1O75955 427 aa18.35■□□□□ 0.53
MBD1-210ENST00000457839 ZNF18P17022 549 aa18.35■□□□□ 0.53
MBD1-210ENST00000457839 VCAM1P19320 739 aa18.35■□□□□ 0.53
MBD1-210ENST00000457839 ZNF658Q5TYW1 1059 aaPredicted RBP18.35■□□□□ 0.53
MBD1-210ENST00000457839 INTS13Q9NVM9 706 aa18.35■□□□□ 0.53
MBD1-210ENST00000457839 ZNF536O15090 1300 aa18.35■□□□□ 0.53
MBD1-210ENST00000457839 CYP3A7-CYP3A51PA0A087WV96 503 aa18.35■□□□□ 0.53
MBD1-210ENST00000457839 CYP3A7P24462 503 aa18.35■□□□□ 0.53
MBD1-210ENST00000457839 ASIC1P78348 528 aa18.35■□□□□ 0.53
MBD1-210ENST00000457839 DYMQ7RTS9 669 aa18.35■□□□□ 0.53
MBD1-210ENST00000457839 APOBEC3FQ8IUX4 373 aaKnown RBP18.35■□□□□ 0.53
MBD1-210ENST00000457839 CCPG1Q9ULG6 757 aa18.35■□□□□ 0.53
MBD1-210ENST00000457839 POLR2AP24928 1970 aaKnown RBP18.35■□□□□ 0.53
MBD1-210ENST00000457839 GCOM1H8Y6P7 765 aaPredicted RBP18.34■□□□□ 0.53
MBD1-210ENST00000457839 FOSP01100 380 aaPredicted RBP18.34■□□□□ 0.53
MBD1-210ENST00000457839 POLR2MP0CAP2 368 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 ZNF76P36508 570 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 DCAF15Q66K64 600 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 PRPF38AQ8NAV1 312 aaKnown RBP18.34■□□□□ 0.53
MBD1-210ENST00000457839 ETNPPLQ8TBG4 499 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 WNK4Q96J92 1243 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 SLF1Q9BQI6 1058 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 RAVER2Q9HCJ3 691 aaKnown RBP18.34■□□□□ 0.53
MBD1-210ENST00000457839 ZHX2Q9Y6X8 837 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 PIK3CDO00329 1044 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 NFIBO00712 420 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 WDR46O15213 610 aaKnown RBP18.34■□□□□ 0.53
MBD1-210ENST00000457839 PLA2G6O60733 806 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 PTPRAP18433 802 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 SCYL3Q8IZE3 742 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 HOOK2Q96ED9 719 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 RPAP3Q9H6T3 665 aaPredicted RBP18.34■□□□□ 0.53
MBD1-210ENST00000457839 RMND1Q9NWS8 449 aa18.34■□□□□ 0.53
MBD1-210ENST00000457839 TRIM49BA6NDI0 452 aa18.33■□□□□ 0.53
MBD1-210ENST00000457839 MYMKA6NI61 221 aa18.33■□□□□ 0.53
MBD1-210ENST00000457839 FCER1AP12319 257 aa18.33■□□□□ 0.53
MBD1-210ENST00000457839 CCT6AP40227 531 aaKnown RBP18.33■□□□□ 0.53
MBD1-210ENST00000457839 SPATA1Q5VX52 437 aa18.33■□□□□ 0.53
MBD1-210ENST00000457839 LRRC8AQ8IWT6 810 aa18.33■□□□□ 0.53
MBD1-210ENST00000457839 NELFBQ8WX92 580 aa18.33■□□□□ 0.53
MBD1-210ENST00000457839 LARP4BQ92615 738 aaKnown RBP18.33■□□□□ 0.53
MBD1-210ENST00000457839 LPAR1Q92633 364 aa18.33■□□□□ 0.53
MBD1-210ENST00000457839 EEF2KMTQ96G04 330 aa18.33■□□□□ 0.53
MBD1-210ENST00000457839 MBOAT7Q96N66 472 aa18.33■□□□□ 0.53
MBD1-210ENST00000457839 CUEDC2Q9H467 287 aa18.33■□□□□ 0.53
MBD1-210ENST00000457839 HMGCS2P54868 508 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms