RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 KLHDC7AQ5VTJ3 777 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 CCDC121Q6ZUS5 278 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 PROSER2Q86WR7 435 aaPredicted RBP15.18■□□□□ 0.02
PTPRE-204ENST00000455661 ZKSCAN4Q969J2 545 aaPredicted RBP15.18■□□□□ 0.02
PTPRE-204ENST00000455661 MMRN2Q9H8L6 949 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 ACTR5Q9H9F9 607 aaPredicted RBP15.18■□□□□ 0.02
PTPRE-204ENST00000455661 FAM207AQ9NSI2 230 aaPredicted RBP15.18■□□□□ 0.02
PTPRE-204ENST00000455661 FAM153AQ9UHL3 310 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 SNAP23O00161 211 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 PSEN1P49768 467 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 GUCY2FP51841 1108 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 ASIC1P78348 528 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 TOM1L2Q6ZVM7 507 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 RRAGAQ7L523 313 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 MAATS1Q7Z4T9 603 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 CCDC13Q8IYE1 715 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 MS4A14Q96JA4 679 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 CD248Q9HCU0 757 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 TMOD3Q9NYL9 352 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 PCDHA4Q9UN74 947 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 GRID2IPA4D2P6 1211 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 KIF5BP33176 963 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 SEC24CP53992 1094 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 HDLBPQ00341 1268 aaKnown RBP15.17■□□□□ 0.02
PTPRE-204ENST00000455661 AMPD3Q01432 767 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 RASSF7Q02833 373 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 CNNM4Q6P4Q7 775 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 ANKRD13CQ8N6S4 541 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 NDST4Q9H3R1 872 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 LUC7LQ9NQ29 371 aaKnown RBP15.17■□□□□ 0.02
PTPRE-204ENST00000455661 SH3GLB2Q9NR46 395 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 TCP11L1Q9NUJ3 509 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 SUFUQ9UMX1 484 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 MYH10P35580 1976 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 PLCH1Q4KWH8 1693 aa15.17■□□□□ 0.02
PTPRE-204ENST00000455661 DUOX1Q9NRD9 1551 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 LRRC53A6NM62 1247 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 LAD1O00515 517 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 BUB1O43683 1085 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 FGFR1OPO95684 399 aaKnown RBP15.16■□□□□ 0.02
PTPRE-204ENST00000455661 NF2P35240 595 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 STK4Q13043 487 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 CCDC50Q8IVM0 306 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.16■□□□□ 0.025e-6■■■■□ 19.4
PTPRE-204ENST00000455661 PIK3R5Q8WYR1 880 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 CCDC114Q96M63 670 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 BRIP1Q9BX63 1249 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 CENPHQ9H3R5 247 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 ABCF2Q9UG63 623 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 SIK3Q9Y2K2 1263 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 ESYT3A0FGR9 886 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 SMIM22K7EJ46 135 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 ADAMTS3O15072 1205 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 RASSF9O75901 435 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 ITGB3BPQ13352 177 aaPredicted RBP15.16■□□□□ 0.02
PTPRE-204ENST00000455661 PREPLQ4J6C6 727 aaPredicted RBP15.16■□□□□ 0.02
PTPRE-204ENST00000455661 CEP85LQ5SZL2 805 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 CACNA2D4Q7Z3S7 1137 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 ADGRA1Q86SQ6 560 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 C3orf20Q8ND61 904 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 C7orf25Q9BPX7 421 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 TRIM9Q9C026 710 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 POLD4Q9HCU8 107 aa15.16■□□□□ 0.02
PTPRE-204ENST00000455661 CYP2D7A0A087X1C5 515 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 C21orf2O43822 256 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 FGRP09769 529 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 MAN2A1Q16706 1144 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 CABP7Q86V35 215 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 CASKIN2Q8WXE0 1202 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 MTMR8Q96EF0 704 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 KRT12Q99456 494 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 SLC40A1Q9NP59 571 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 PPANQ9NQ55 473 aaKnown RBP15.15■□□□□ 0.02
PTPRE-204ENST00000455661 SALL4Q9UJQ4 1053 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 PLAAQ9Y263 795 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 SSU72P8A0A1W2PR75 194 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 TMCO5BA8MYB1 307 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 GCOM1H8Y6P7 765 aaPredicted RBP15.15■□□□□ 0.02
PTPRE-204ENST00000455661 MYZAPP0CAP1 466 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 PLCG1P19174 1290 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 PRPHP41219 470 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 TNNC1P63316 161 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 GFPT1Q06210 699 aaPredicted RBP15.15■□□□□ 0.02
PTPRE-204ENST00000455661 CDC37Q16543 378 aaPredicted RBP15.15■□□□□ 0.02
PTPRE-204ENST00000455661 LRIG3Q6UXM1 1119 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 DDX17Q92841 729 aaKnown RBP15.15■□□□□ 0.02
PTPRE-204ENST00000455661 CYFIP2Q96F07 1278 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 AK8Q96MA6 479 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 TMEM60Q9H2L4 133 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 TMBIM4Q9HC24 238 aa15.15■□□□□ 0.02
PTPRE-204ENST00000455661 FAM205AQ6ZU69 1335 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 GMNCA6NCL1 334 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 EPHB6O15197 1021 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 FCER1AP12319 257 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 VEGFAP15692 232 aaPredicted RBP15.14■□□□□ 0.01
PTPRE-204ENST00000455661 HPDP32754 393 aaPredicted RBP15.14■□□□□ 0.01
PTPRE-204ENST00000455661 HSPA9P38646 679 aaKnown RBP15.14■□□□□ 0.01
PTPRE-204ENST00000455661 COBLL1Q53SF7 1204 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 TDRD12Q587J7 1177 aaKnown RBP15.14■□□□□ 0.01
PTPRE-204ENST00000455661 C6orf89Q6UWU4 347 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms