RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SOX5P35711 763 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 FLT3P36888 993 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 KIR2DL1P43626 348 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 KIR2DL2P43627 348 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 RPL11P62913 178 aaKnown RBP6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 CNNM4Q6P4Q7 775 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 ANKS4BQ8N8V4 417 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 TARS2Q9BW92 718 aaKnown RBP6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 PCDHA8Q9Y5H6 950 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 PCDHA2Q9Y5H9 948 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 TIMM13Q9Y5L4 95 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 CLSPNQ9HAW4 1339 aa6.15□□□□□ -1.43
HMGB1P16-201ENST00000447155 FUT4P22083 530 aa6.14□□□□□ -1.43
HMGB1P16-201ENST00000447155 IGBP1P78318 339 aa6.14□□□□□ -1.43
HMGB1P16-201ENST00000447155 CHRNEQ04844 493 aa6.14□□□□□ -1.43
HMGB1P16-201ENST00000447155 PAK1Q13153 545 aa6.14□□□□□ -1.43
HMGB1P16-201ENST00000447155 LSAMPQ13449 338 aa6.14□□□□□ -1.43
HMGB1P16-201ENST00000447155 RALGPS1Q5JS13 557 aa6.14□□□□□ -1.43
HMGB1P16-201ENST00000447155 SLC23A3Q6PIS1 610 aa6.14□□□□□ -1.43
HMGB1P16-201ENST00000447155 SLCO6A1Q86UG4 719 aa6.14□□□□□ -1.43
HMGB1P16-201ENST00000447155 PAK6Q9NQU5 681 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P16-201ENST00000447155 EBF1Q9UH73 591 aa6.14□□□□□ -1.43
HMGB1P16-201ENST00000447155 NPTXRO95502 500 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 CNGA1P29973 690 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 CORO7P57737 925 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 RTP1P59025 263 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 ANAPC15P60006 121 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 AMPD3Q01432 767 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 ZNF460Q14592 562 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 CT47A1Q5JQC4 288 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 NFXL1Q6ZNB6 911 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 UBE2R2Q712K3 238 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 RNF180Q86T96 592 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 DDX53Q86TM3 631 aaKnown RBP6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 SPPL2CQ8IUH8 684 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 ZC3H7AQ8IWR0 971 aaKnown RBP6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 NLGN2Q8NFZ4 835 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 JMJD8Q96S16 334 aa6.13□□□□□ -1.43
HMGB1P16-201ENST00000447155 FAM83GA6ND36 823 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 WTIPA6NIX2 430 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 WNT9AO14904 365 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 USP2O75604 605 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 SOD2P04179 222 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 BCL6P41182 706 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 NEK4P51957 841 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 SLC14A2Q15849 920 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 CFAP100Q494V2 611 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 ZCCHC8Q6NZY4 707 aaKnown RBP6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 GALNT18Q6P9A2 607 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 CEP128Q6ZU80 1094 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 OXR1Q8N573 874 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 AGBL5Q8NDL9 886 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 PDZD8Q8NEN9 1154 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 PCDH19Q8TAB3 1148 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 PI4K2BQ8TCG2 481 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 DPF3Q92784 378 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 CHAMP1Q96JM3 812 aa6.12□□□□□ -1.43
HMGB1P16-201ENST00000447155 FITM1A5D6W6 292 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 FAM47E-STBD1D6RA91 191 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 H7BY64 318 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 WNT11O96014 354 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 JMJD7P0C870 316 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 KCNA6P17658 529 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 GRK2P25098 689 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 GRK3P35626 688 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 HK2P52789 917 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 HSF5Q4G112 596 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 CDCA2Q69YH5 1023 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 ANKLE2Q86XL3 938 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 Q8N1Y9 231 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 ASIC4Q96FT7 647 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 TMEM169Q96HH4 297 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 MTFR1LQ9H019 292 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 IPPKQ9H8X2 491 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 PRDM7Q9NQW5 492 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 PCMTD2Q9NV79 361 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 CLDND1Q9NY35 253 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 GULP1Q9UBP9 304 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 ADGRE2Q9UHX3 823 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 FBXL7Q9UJT9 491 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 TAF6LQ9Y6J9 622 aa6.11□□□□□ -1.43
HMGB1P16-201ENST00000447155 A0A1W2PQ27 194 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 A0A1W2PQ64 194 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 A0A1W2PQC6 194 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 A0A1W2PQD8 194 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 GSTA4O15217 222 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 NRDCO43847 1150 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 ADAM23O75077 832 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 CKMP06732 381 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 GDNFP39905 211 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 PLCL1Q15111 1095 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 NR0B2Q15466 257 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 FAM47CQ5HY64 1035 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 PIK3R6Q5UE93 754 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 ABHD17CQ6PCB6 329 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 CEP68Q76N32 757 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 DDX46Q7L014 1031 aaKnown RBP6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 NLRP10Q86W26 655 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms