RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 KPNA6O60684 536 aa21.47■■□□□ 1.03
AC004540.1-201ENST00000439120 CFBP00751 764 aa21.47■■□□□ 1.03
AC004540.1-201ENST00000439120 ARHGEF16Q5VV41 709 aa21.47■■□□□ 1.03
AC004540.1-201ENST00000439120 SYTL5Q8TDW5 730 aaPredicted RBP21.47■■□□□ 1.03
AC004540.1-201ENST00000439120 TBC1D5Q92609 795 aa21.47■■□□□ 1.03
AC004540.1-201ENST00000439120 TAAR1Q96RJ0 339 aa21.47■■□□□ 1.03
AC004540.1-201ENST00000439120 RMDN3Q96TC7 470 aa21.47■■□□□ 1.03
AC004540.1-201ENST00000439120 ALDH8A1Q9H2A2 487 aaPredicted RBP21.47■■□□□ 1.03
AC004540.1-201ENST00000439120 SGSM2O43147 1006 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 SUPT20HL2P0C7V6 817 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 ACRP10323 421 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 WTAPQ15007 396 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 STXBP2Q15833 593 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 FAM47CQ5HY64 1035 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 TMEM240Q5SV17 173 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 SEPT14Q6ZU15 432 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 IWS1Q96ST2 819 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 CDX2Q99626 313 aaPredicted RBP21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 MTIF3Q9H2K0 278 aaKnown RBP21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 IL23AQ9NPF7 189 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 MAD2L2Q9UI95 211 aa21.46■■□□□ 1.03
AC004540.1-201ENST00000439120 TMEM265A0A087WTH1 108 aa21.45■■□□□ 1.02
AC004540.1-201ENST00000439120 E7EWF7 191 aa21.45■■□□□ 1.02
AC004540.1-201ENST00000439120 ZBTB5O15062 677 aa21.45■■□□□ 1.02
AC004540.1-201ENST00000439120 TRAF1Q13077 416 aa21.45■■□□□ 1.02
AC004540.1-201ENST00000439120 ZNF365Q70YC5 407 aa21.45■■□□□ 1.02
AC004540.1-201ENST00000439120 HOMER1Q86YM7 354 aa21.45■■□□□ 1.02
AC004540.1-201ENST00000439120 COPS5Q92905 334 aa21.45■■□□□ 1.02
AC004540.1-201ENST00000439120 NOC4LQ9BVI4 516 aaKnown RBP21.45■■□□□ 1.02
AC004540.1-201ENST00000439120 EIF2AK2P19525 551 aaKnown RBP21.44■■□□□ 1.02
AC004540.1-201ENST00000439120 DNAJB2P25686 324 aa21.44■■□□□ 1.02
AC004540.1-201ENST00000439120 CCL23P55773 120 aa21.44■■□□□ 1.02
AC004540.1-201ENST00000439120 C16orf59Q7L2K0 433 aa21.44■■□□□ 1.02
AC004540.1-201ENST00000439120 TTYH1Q9H313 450 aaPredicted RBP21.44■■□□□ 1.02
AC004540.1-201ENST00000439120 COL20A1Q9P218 1284 aa21.44■■□□□ 1.02
AC004540.1-201ENST00000439120 PCDHA1Q9Y5I3 950 aa21.44■■□□□ 1.02
AC004540.1-201ENST00000439120 PALM3A6NDB9 673 aaPredicted RBP21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 A6NJR5 290 aa21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 ARIH2O95376 493 aa21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 GH1P01241 217 aa21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 FGBP02675 491 aa21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 CHMP4BP1P59074 171 aa21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 GRM4Q14833 912 aa21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 TMEM67Q5HYA8 995 aa21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 CATIPQ7Z7H3 387 aa21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 TRMT13Q9NUP7 481 aaKnown RBP21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 UMODL1Q5DID0 1318 aa21.43■■□□□ 1.02
AC004540.1-201ENST00000439120 LY6KQ17RY6 165 aa21.42■■□□□ 1.02
AC004540.1-201ENST00000439120 NBPF20Q3BBV1 942 aa21.42■■□□□ 1.02
AC004540.1-201ENST00000439120 KIAA1217Q5T5P2 1943 aa21.42■■□□□ 1.02
AC004540.1-201ENST00000439120 CHST3Q7LGC8 479 aa21.42■■□□□ 1.02
AC004540.1-201ENST00000439120 RPUSD2Q8IZ73 545 aaKnown RBP21.42■■□□□ 1.02
AC004540.1-201ENST00000439120 MAP4K1Q92918 833 aa21.42■■□□□ 1.02
AC004540.1-201ENST00000439120 PXMP2Q9NR77 195 aa21.42■■□□□ 1.02
AC004540.1-201ENST00000439120 MAP3K20Q9NYL2 800 aaKnown RBP21.42■■□□□ 1.02
AC004540.1-201ENST00000439120 NOD1Q9Y239 953 aa21.42■■□□□ 1.02
AC004540.1-201ENST00000439120 RBM8AQ9Y5S9 174 aaKnown RBP21.42■■□□□ 1.02
AC004540.1-201ENST00000439120 EIF3JO75822 258 aaKnown RBP21.41■■□□□ 1.02
AC004540.1-201ENST00000439120 CYP2C9P11712 490 aa21.41■■□□□ 1.02
AC004540.1-201ENST00000439120 HSD17B4P51659 736 aa21.41■■□□□ 1.02
AC004540.1-201ENST00000439120 NFRKBQ6P4R8 1299 aa21.41■■□□□ 1.02
AC004540.1-201ENST00000439120 AFG1LQ8WV93 481 aa21.41■■□□□ 1.02
AC004540.1-201ENST00000439120 MYLIPQ8WY64 445 aa21.41■■□□□ 1.02
AC004540.1-201ENST00000439120 TIFAQ96CG3 184 aa21.41■■□□□ 1.02
AC004540.1-201ENST00000439120 MTMR8Q96EF0 704 aa21.41■■□□□ 1.02
AC004540.1-201ENST00000439120 MRVI1Q9Y6F6 885 aa21.41■■□□□ 1.02
AC004540.1-201ENST00000439120 TAF6LQ9Y6J9 622 aa21.41■■□□□ 1.02
AC004540.1-201ENST00000439120 DLL1O00548 723 aa21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 PPP1R11O60927 126 aaPredicted RBP21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 NR3C2P08235 984 aa21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 MYCLP12524 364 aaPredicted RBP21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 FOSL2P15408 326 aa21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 CCDC62Q6P9F0 684 aa21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 CASC1Q6TDU7 716 aa21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 STOX1Q6ZVD7 989 aa21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 SAMD3Q8N6K7 520 aa21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 HERVK_113Q902F9 699 aa21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 PIGSQ96S52 555 aa21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 WNT8AQ9H1J5 351 aa21.4■■□□□ 1.02
AC004540.1-201ENST00000439120 SCN10AQ9Y5Y9 1956 aa21.39■■□□□ 1.02
AC004540.1-201ENST00000439120 MMP3P08254 477 aa21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 HOXA13P31271 388 aaPredicted RBP21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 PTPN11Q06124 597 aaPredicted RBP21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 RASIP1Q5U651 963 aa21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 OTOP2Q7RTS6 562 aa21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 MAFAQ8NHW3 353 aaPredicted RBP21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 SCLYQ96I15 445 aa21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 ZNF576Q9H609 170 aa21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 RIOX1Q9H6W3 641 aa21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 SENP2Q9HC62 589 aa21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 MSRAQ9UJ68 235 aa21.39■■□□□ 1.01
AC004540.1-201ENST00000439120 PNMA6FA0A0J9YX94 578 aa21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 GRXCR1A8MXD5 290 aa21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 GCOM1H8Y6P7 765 aaPredicted RBP21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 OPLAHO14841 1288 aa21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 POLR2MP0CAP2 368 aa21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 CASTP20810 708 aaKnown RBP21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 ARHGAP1Q07960 439 aa21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 TROAPQ12815 778 aa21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 RETREG2Q8NC44 543 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms