RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 PDE4AP27815 886 aa21.27■■□□□ 1
GTF3A-204ENST00000438571 DNERQ8NFT8 737 aa21.27■■□□□ 1
GTF3A-204ENST00000438571 ZSCAN10Q96SZ4 725 aaPredicted RBP21.27■■□□□ 1
GTF3A-204ENST00000438571 DSCC1Q9BVC3 393 aa21.27■■□□□ 1
GTF3A-204ENST00000438571 NKX2-4Q9H2Z4 354 aa21.27■■□□□ 1
GTF3A-204ENST00000438571 PRDM12Q9H4Q4 367 aa21.27■■□□□ 1
GTF3A-204ENST00000438571 KAT14Q9H8E8 782 aa21.27■■□□□ 1
GTF3A-204ENST00000438571 PRDM6Q9NQX0 595 aa21.27■■□□□ 1
GTF3A-204ENST00000438571 POLR3EQ9NVU0 708 aa21.27■■□□□ 1
GTF3A-204ENST00000438571 ZSWIM5Q9P217 1185 aa21.27■■□□□ 1
GTF3A-204ENST00000438571 FGBP02675 491 aa21.26■□□□□ 0.99
GTF3A-204ENST00000438571 CPT1AP50416 773 aa21.26■□□□□ 0.99
GTF3A-204ENST00000438571 QRICH1Q2TAL8 776 aa21.26■□□□□ 0.99
GTF3A-204ENST00000438571 IQCA1Q86XH1 822 aa21.26■□□□□ 0.99
GTF3A-204ENST00000438571 ANKS1AQ92625 1134 aa21.26■□□□□ 0.99
GTF3A-204ENST00000438571 TAAR1Q96RJ0 339 aa21.26■□□□□ 0.99
GTF3A-204ENST00000438571 MTG1Q9BT17 334 aaPredicted RBP21.26■□□□□ 0.99
GTF3A-204ENST00000438571 REV3LO60673 3130 aa21.25■□□□□ 0.99
GTF3A-204ENST00000438571 COL4A4P53420 1690 aaPredicted RBP21.25■□□□□ 0.99
GTF3A-204ENST00000438571 GSPT1P15170 499 aaKnown RBP21.25■□□□□ 0.99
GTF3A-204ENST00000438571 RABGGTBP53611 331 aa21.25■□□□□ 0.99
GTF3A-204ENST00000438571 NBPF20Q3BBV1 942 aa21.25■□□□□ 0.99
GTF3A-204ENST00000438571 FAM47CQ5HY64 1035 aa21.25■□□□□ 0.99
GTF3A-204ENST00000438571 SYTL5Q8TDW5 730 aaPredicted RBP21.25■□□□□ 0.99
GTF3A-204ENST00000438571 SCFD2Q8WU76 684 aa21.25■□□□□ 0.99
GTF3A-204ENST00000438571 ABCB11O95342 1321 aa21.25■□□□□ 0.99
GTF3A-204ENST00000438571 TCF20Q9UGU0 1960 aaKnown RBP21.25■□□□□ 0.99
GTF3A-204ENST00000438571 TXNP10599 105 aaKnown RBP21.24■□□□□ 0.99
GTF3A-204ENST00000438571 MYOGP15173 224 aa21.24■□□□□ 0.99
GTF3A-204ENST00000438571 ADGRE1Q14246 886 aa21.24■□□□□ 0.99
GTF3A-204ENST00000438571 IMMTQ16891 758 aaKnown RBP21.24■□□□□ 0.99
GTF3A-204ENST00000438571 CYB5R4Q7L1T6 521 aa21.24■□□□□ 0.99
GTF3A-204ENST00000438571 STAG2Q8N3U4 1231 aa21.24■□□□□ 0.99
GTF3A-204ENST00000438571 SEZ6LQ9BYH1 1024 aa21.24■□□□□ 0.99
GTF3A-204ENST00000438571 JMJD4Q9H9V9 463 aa21.24■□□□□ 0.99
GTF3A-204ENST00000438571 VAT1LQ9HCJ6 419 aa21.24■□□□□ 0.99
GTF3A-204ENST00000438571 PNMA2Q9UL42 364 aa21.24■□□□□ 0.99
GTF3A-204ENST00000438571 A6NJR5 290 aa21.23■□□□□ 0.99
GTF3A-204ENST00000438571 HIP1O00291 1037 aa21.23■□□□□ 0.99
GTF3A-204ENST00000438571 TTLL4Q14679 1199 aa21.23■□□□□ 0.99
GTF3A-204ENST00000438571 ASPRV1Q53RT3 343 aa21.23■□□□□ 0.99
GTF3A-204ENST00000438571 DEFB128Q7Z7B8 93 aa21.23■□□□□ 0.99
GTF3A-204ENST00000438571 PPM1EQ8WY54 764 aa21.23■□□□□ 0.99
GTF3A-204ENST00000438571 OPLAHO14841 1288 aa21.22■□□□□ 0.99
GTF3A-204ENST00000438571 NKRFO15226 690 aaKnown RBP eCLIP21.22■□□□□ 0.99
GTF3A-204ENST00000438571 DHX16O60231 1041 aaKnown RBP21.22■□□□□ 0.99
GTF3A-204ENST00000438571 LY6KQ17RY6 165 aa21.22■□□□□ 0.99
GTF3A-204ENST00000438571 CCDC62Q6P9F0 684 aa21.22■□□□□ 0.99
GTF3A-204ENST00000438571 SEPT14Q6ZU15 432 aa21.22■□□□□ 0.99
GTF3A-204ENST00000438571 RGS22Q8NE09 1264 aa21.22■□□□□ 0.99
GTF3A-204ENST00000438571 GPHNQ9NQX3 736 aaPredicted RBP21.22■□□□□ 0.99
GTF3A-204ENST00000438571 ZBBXA8MT70 800 aa21.21■□□□□ 0.99
GTF3A-204ENST00000438571 PPP1R11O60927 126 aaPredicted RBP21.21■□□□□ 0.99
GTF3A-204ENST00000438571 PARP1P09874 1014 aaKnown RBP21.21■□□□□ 0.99
GTF3A-204ENST00000438571 CHMP4BP1P59074 171 aa21.21■□□□□ 0.99
GTF3A-204ENST00000438571 ARHGAP1Q07960 439 aa21.21■□□□□ 0.99
GTF3A-204ENST00000438571 SEC23AQ15436 765 aa21.21■□□□□ 0.99
GTF3A-204ENST00000438571 RAB30Q15771 203 aa21.21■□□□□ 0.99
GTF3A-204ENST00000438571 SLC35G1Q2M3R5 365 aa21.21■□□□□ 0.99
GTF3A-204ENST00000438571 CCDC178Q5BJE1 867 aa21.21■□□□□ 0.99
GTF3A-204ENST00000438571 AFG1LQ8WV93 481 aa21.21■□□□□ 0.99
GTF3A-204ENST00000438571 MPHOSPH6Q99547 160 aaKnown RBP21.21■□□□□ 0.99
GTF3A-204ENST00000438571 MTIF3Q9H2K0 278 aaKnown RBP21.21■□□□□ 0.99
GTF3A-204ENST00000438571 MSRAQ9UJ68 235 aa21.21■□□□□ 0.99
GTF3A-204ENST00000438571 RAD50Q92878 1312 aa21.21■□□□□ 0.99
GTF3A-204ENST00000438571 MMP3P08254 477 aa21.2■□□□□ 0.98
GTF3A-204ENST00000438571 EIF2AK2P19525 551 aaKnown RBP21.2■□□□□ 0.98
GTF3A-204ENST00000438571 TTC22Q5TAA0 569 aa21.2■□□□□ 0.98
GTF3A-204ENST00000438571 CHST3Q7LGC8 479 aa21.2■□□□□ 0.98
GTF3A-204ENST00000438571 FBXO11Q86XK2 927 aa21.2■□□□□ 0.98
GTF3A-204ENST00000438571 CTAGE1Q96RT6 745 aa21.2■□□□□ 0.98
GTF3A-204ENST00000438571 GAS2L1Q99501 681 aaPredicted RBP21.2■□□□□ 0.98
GTF3A-204ENST00000438571 KRT23Q9C075 422 aa21.2■□□□□ 0.98
GTF3A-204ENST00000438571 TAF6LQ9Y6J9 622 aa21.2■□□□□ 0.98
GTF3A-204ENST00000438571 MICAL3Q7RTP6 2002 aa21.19■□□□□ 0.98
GTF3A-204ENST00000438571 PRRC2BQ5JSZ5 2229 aaKnown RBP21.19■□□□□ 0.98
GTF3A-204ENST00000438571 SUPT20HL2P0C7V6 817 aa21.19■□□□□ 0.98
GTF3A-204ENST00000438571 NT5C2P49902 561 aa21.19■□□□□ 0.98
GTF3A-204ENST00000438571 IFIT1BQ5T764 474 aaKnown RBP21.19■□□□□ 0.98
GTF3A-204ENST00000438571 NFRKBQ6P4R8 1299 aa21.19■□□□□ 0.98
GTF3A-204ENST00000438571 RPUSD2Q8IZ73 545 aaKnown RBP21.19■□□□□ 0.98
GTF3A-204ENST00000438571 RMDN3Q96TC7 470 aa21.19■□□□□ 0.98
GTF3A-204ENST00000438571 UBAC1Q9BSL1 405 aa21.19■□□□□ 0.98
GTF3A-204ENST00000438571 SENP2Q9HC62 589 aa21.19■□□□□ 0.98
GTF3A-204ENST00000438571 CTNNA3Q9UI47 895 aa21.19■□□□□ 0.98
GTF3A-204ENST00000438571 SLC4A7Q9Y6M7 1214 aa21.19■□□□□ 0.98
GTF3A-204ENST00000438571 CFBP00751 764 aa21.18■□□□□ 0.98
GTF3A-204ENST00000438571 PTH1RQ03431 593 aa21.18■□□□□ 0.98
GTF3A-204ENST00000438571 BRDTQ58F21 947 aaPredicted RBP21.18■□□□□ 0.98
GTF3A-204ENST00000438571 NSUN6Q8TEA1 469 aaKnown RBP21.18■□□□□ 0.98
GTF3A-204ENST00000438571 KAT2BQ92831 832 aa21.18■□□□□ 0.98
GTF3A-204ENST00000438571 PXMP2Q9NR77 195 aa21.18■□□□□ 0.98
GTF3A-204ENST00000438571 MAD2L2Q9UI95 211 aa21.18■□□□□ 0.98
GTF3A-204ENST00000438571 MRPL11Q9Y3B7 192 aaKnown RBP21.18■□□□□ 0.98
GTF3A-204ENST00000438571 B4DLN1 442 aa21.17■□□□□ 0.98
GTF3A-204ENST00000438571 GH1P01241 217 aa21.17■□□□□ 0.98
GTF3A-204ENST00000438571 IQCF3P0C7M6 154 aa21.17■□□□□ 0.98
GTF3A-204ENST00000438571 MRPL12P52815 198 aaKnown RBP21.17■□□□□ 0.98
GTF3A-204ENST00000438571 CCDC85BQ15834 202 aaPredicted RBP21.17■□□□□ 0.98
GTF3A-204ENST00000438571 GDF6Q6KF10 455 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms