RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 BAATQ14032 418 aaPredicted RBP26.17■■□□□ 1.78
CPSF4-204ENST00000436336 PPP4R3AQ6IN85 833 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.17■■□□□ 1.78
CPSF4-204ENST00000436336 A1CFQ9NQ94 594 aaKnown RBP26.17■■□□□ 1.78
CPSF4-204ENST00000436336 COL20A1Q9P218 1284 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 PLXNB2O15031 1838 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 TAF1CQ15572 869 aaPredicted RBP26.17■■□□□ 1.78
CPSF4-204ENST00000436336 MOXD1Q6UVY6 613 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 ANKRD13CQ8N6S4 541 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 MROH8Q9H579 483 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 CYP39A1Q9NYL5 469 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 PFASO15067 1338 aa26.16■■□□□ 1.78
CPSF4-204ENST00000436336 GCFC2P16383 781 aaKnown RBP26.16■■□□□ 1.78
CPSF4-204ENST00000436336 ME1P48163 572 aa26.16■■□□□ 1.78
CPSF4-204ENST00000436336 UBE2HP62256 183 aa26.16■■□□□ 1.78
CPSF4-204ENST00000436336 ATP2C1P98194 919 aaPredicted RBP26.16■■□□□ 1.78
CPSF4-204ENST00000436336 CAPNS2Q96L46 248 aa26.16■■□□□ 1.78
CPSF4-204ENST00000436336 RPTORQ8N122 1335 aa26.15■■□□□ 1.78
CPSF4-204ENST00000436336 ADGRA2Q96PE1 1338 aa26.15■■□□□ 1.78
CPSF4-204ENST00000436336 CYP3A4P08684 503 aa26.15■■□□□ 1.78
CPSF4-204ENST00000436336 PTGDRQ13258 359 aa26.15■■□□□ 1.78
CPSF4-204ENST00000436336 FAM110CQ1W6H9 321 aa26.15■■□□□ 1.78
CPSF4-204ENST00000436336 ANKRD35Q8N283 1001 aa26.15■■□□□ 1.78
CPSF4-204ENST00000436336 ZIC5Q96T25 663 aa26.15■■□□□ 1.78
CPSF4-204ENST00000436336 PCDHA7Q9UN72 937 aa26.15■■□□□ 1.78
CPSF4-204ENST00000436336 FRMPD4Q14CM0 1322 aa26.15■■□□□ 1.78
CPSF4-204ENST00000436336 GADD45BO75293 160 aaPredicted RBP26.14■■□□□ 1.78
CPSF4-204ENST00000436336 MARCKSP29966 332 aaPredicted RBP26.14■■□□□ 1.78
CPSF4-204ENST00000436336 REM2Q8IYK8 340 aaPredicted RBP26.14■■□□□ 1.78
CPSF4-204ENST00000436336 CYP3A7-CYP3A51PA0A087WV96 503 aa26.14■■□□□ 1.77
CPSF4-204ENST00000436336 GOLGA6L4A6NEF3 574 aa26.14■■□□□ 1.77
CPSF4-204ENST00000436336 LAD1O00515 517 aa26.14■■□□□ 1.77
CPSF4-204ENST00000436336 TDP2O95551 362 aa26.14■■□□□ 1.77
CPSF4-204ENST00000436336 CYP3A7P24462 503 aa26.14■■□□□ 1.77
CPSF4-204ENST00000436336 C4orf32Q8N8J7 132 aa26.14■■□□□ 1.77
CPSF4-204ENST00000436336 TAAR1Q96RJ0 339 aa26.14■■□□□ 1.77
CPSF4-204ENST00000436336 NEMFO60524 1076 aa26.13■■□□□ 1.77
CPSF4-204ENST00000436336 CIITAP33076 1130 aa26.13■■□□□ 1.77
CPSF4-204ENST00000436336 ADALQ6DHV7 355 aa26.13■■□□□ 1.77
CPSF4-204ENST00000436336 ARL6IP4Q66PJ3 421 aaKnown RBP26.12■■□□□ 1.77
CPSF4-204ENST00000436336 KRI1Q8N9T8 703 aaKnown RBP26.12■■□□□ 1.77
CPSF4-204ENST00000436336 MBOAT7Q96N66 472 aa26.12■■□□□ 1.77
CPSF4-204ENST00000436336 RMDN3Q96TC7 470 aa26.12■■□□□ 1.77
CPSF4-204ENST00000436336 ZFYVE28Q9HCC9 887 aa26.12■■□□□ 1.77
CPSF4-204ENST00000436336 DDX25Q9UHL0 483 aaKnown RBP26.12■■□□□ 1.77
CPSF4-204ENST00000436336 SRPRBQ9Y5M8 271 aaKnown RBP26.12■■□□□ 1.77
CPSF4-204ENST00000436336 PTPREP23469 700 aa26.11■■□□□ 1.77
CPSF4-204ENST00000436336 FERMT2Q96AC1 680 aa26.11■■□□□ 1.77
CPSF4-204ENST00000436336 PORCNQ9H237 461 aa26.11■■□□□ 1.77
CPSF4-204ENST00000436336 PXMP2Q9NR77 195 aa26.11■■□□□ 1.77
CPSF4-204ENST00000436336 FBXO2Q9UK22 296 aaPredicted RBP26.11■■□□□ 1.77
CPSF4-204ENST00000436336 MRVI1Q9Y6F6 885 aa26.11■■□□□ 1.77
CPSF4-204ENST00000436336 PLXNA1Q9UIW2 1896 aa26.11■■□□□ 1.77
CPSF4-204ENST00000436336 CUTAO60888 179 aa26.11■■□□□ 1.77
CPSF4-204ENST00000436336 ALDH1A1P00352 501 aa26.11■■□□□ 1.77
CPSF4-204ENST00000436336 SLC37A4O43826 429 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 TLR2O60603 784 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 AOC2O75106 756 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 BCRP11274 1271 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 ZNF76P36508 570 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 PRPHP41219 470 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 UBXN2AP68543 259 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 KCTD2Q14681 263 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 SKOR2Q2VWA4 1001 aaPredicted RBP26.1■■□□□ 1.77
CPSF4-204ENST00000436336 AXDND1Q5T1B0 1012 aaPredicted RBP26.1■■□□□ 1.77
CPSF4-204ENST00000436336 ARHGEF16Q5VV41 709 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 POTEDQ86YR6 584 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 TMEM60Q9H2L4 133 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 R3HDMLQ9H3Y0 253 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 EFCC1Q9HA90 598 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 CPA4Q9UI42 421 aa26.1■■□□□ 1.77
CPSF4-204ENST00000436336 A0A1W2PQ27 194 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 A0A1W2PQ64 194 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 A0A1W2PQD8 194 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 MBD3O95983 291 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 OR52Z1P0C646 297 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 PGM5Q15124 567 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 Q4G0T1 1027 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 WDR78Q5VTH9 848 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 PCNX4Q63HM2 1172 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 CCAR1Q8IX12 1150 aaKnown RBP26.09■■□□□ 1.77
CPSF4-204ENST00000436336 DNERQ8NFT8 737 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 NSUN6Q8TEA1 469 aaKnown RBP26.09■■□□□ 1.77
CPSF4-204ENST00000436336 MMP19Q99542 508 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 PDCD2LQ9BRP1 358 aa26.09■■□□□ 1.77
CPSF4-204ENST00000436336 FCER1AP12319 257 aa26.08■■□□□ 1.77
CPSF4-204ENST00000436336 EIF2AK2P19525 551 aaKnown RBP26.08■■□□□ 1.77
CPSF4-204ENST00000436336 CALCRLQ16602 461 aa26.08■■□□□ 1.77
CPSF4-204ENST00000436336 C17orf99Q6UX52 265 aa26.08■■□□□ 1.77
CPSF4-204ENST00000436336 PURBQ96QR8 312 aaKnown RBP26.08■■□□□ 1.77
CPSF4-204ENST00000436336 DDX49Q9Y6V7 483 aaKnown RBP26.08■■□□□ 1.77
CPSF4-204ENST00000436336 FAM86B1E9PN63 330 aa26.08■■□□□ 1.76
CPSF4-204ENST00000436336 POTEB2H3BUK9 544 aa26.08■■□□□ 1.76
CPSF4-204ENST00000436336 CA12O43570 354 aa26.08■■□□□ 1.76
CPSF4-204ENST00000436336 FAM86B2P0C5J1 330 aa26.08■■□□□ 1.76
CPSF4-204ENST00000436336 ZNF579Q8NAF0 562 aaKnown RBP26.08■■□□□ 1.76
CPSF4-204ENST00000436336 MTMR9Q96QG7 549 aa26.08■■□□□ 1.76
CPSF4-204ENST00000436336 CRHR2Q13324 411 aa26.07■■□□□ 1.76
CPSF4-204ENST00000436336 TPRNQ4KMQ1 711 aa26.07■■□□□ 1.76
CPSF4-204ENST00000436336 XRRA1Q6P2D8 792 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms