RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 USP40Q9NVE5 1235 aa4.39□□□□□ -1.71
HMGB1P9-201ENST00000429856 ERVK13-1Q9NX77 482 aa4.39□□□□□ -1.71
HMGB1P9-201ENST00000429856 EMC9Q9Y3B6 208 aa4.39□□□□□ -1.71
HMGB1P9-201ENST00000429856 BACE2Q9Y5Z0 518 aa4.39□□□□□ -1.71
HMGB1P9-201ENST00000429856 TRBV23OR9-2A0A075B6M9 112 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 A0A1W2PQ45 241 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 A0A1W2PQY0 241 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 OVOL3O00110 214 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 AURKAO14965 403 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 FGF10O15520 208 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 BUB1BO60566 1050 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 HMGB1P09429 215 aaKnown RBP4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 TNFRSF1AP19438 455 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 RTP1P59025 263 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 RBL2Q08999 1139 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 LAPTM5Q13571 262 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 SV2CQ496J9 727 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 MRM1Q6IN84 353 aaKnown RBP4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 GALNT18Q6P9A2 607 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 ZPBP2Q6X784 338 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 TRIM59Q8IWR1 403 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 SLC16A11Q8NCK7 471 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 ST13P5Q8NFI4 369 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 MICAL1Q8TDZ2 1067 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 HHIPL1Q96JK4 782 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 FCRL3Q96P31 734 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 ST7Q9NRC1 585 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 SIRPGQ9P1W8 387 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 LRP2BPQ9P2M1 347 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 APEX2Q9UBZ4 518 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 TAF6LQ9Y6J9 622 aa4.38□□□□□ -1.71
HMGB1P9-201ENST00000429856 IQCA1LA6NCM1 817 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 WTIPA6NIX2 430 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 FADS2P1A8MWK0 482 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 FFAR3O14843 346 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 PPM1GO15355 546 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 KCNH1O95259 989 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 TBC1D8O95759 1140 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 IFNGR1P15260 489 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 SEPHS1P49903 392 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 RAB3GAP1Q15042 981 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 SLC10A6Q3KNW5 377 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 TMC6Q7Z403 805 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 JAZF1Q86VZ6 243 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 ZNF227Q86WZ6 799 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 ZNF669Q96BR6 464 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 PTCHD1Q96NR3 888 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 SORCS2Q96PQ0 1159 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 KLHL14Q9P2G3 628 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 GPR55Q9Y2T6 319 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 MSRB2Q9Y3D2 182 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 TBX22Q9Y458 520 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 PCDHA5Q9Y5H7 936 aa4.37□□□□□ -1.71
HMGB1P9-201ENST00000429856 C2orf71A6NGG8 1288 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 STXBP3O00186 592 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 VAMP4O75379 141 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 EFEMP2O95967 443 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 PFKLP17858 780 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 HMGA2P52926 109 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 CORO7P57737 925 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 DPY19L1Q2PZI1 675 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 GTF2IRD2BQ6EKJ0 949 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 LRP10Q7Z4F1 713 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 SLCO6A1Q86UG4 719 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 GTF2IRD2Q86UP8 949 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 FERMT3Q86UX7 667 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 JAMLQ86YT9 394 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 SGSM3Q96HU1 749 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 MRGPRX3Q96LB0 322 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 CCDC140Q96MF4 163 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 CCDC113Q9H0I3 377 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 NKX2-4Q9H2Z4 354 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 CYP26B1Q9NR63 512 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 SMPD4Q9NXE4 827 aa4.36□□□□□ -1.71
HMGB1P9-201ENST00000429856 A0A1W2PQ27 194 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 A0A1W2PQ64 194 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 A0A1W2PQC6 194 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 A0A1W2PQD8 194 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 ANKRD62A6NC57 917 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 CPP00450 1065 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 ITGAVP06756 1048 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 PAMP19021 973 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 HOXC12P31275 282 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 NCKAP1LP55160 1127 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 ADAM17P78536 824 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 BMS1Q14692 1282 aaKnown RBP4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 TARBP2Q15633 366 aaKnown RBP4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 HSF5Q4G112 596 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 NT5DC1Q5TFE4 455 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 NOP9Q86U38 636 aaKnown RBP4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 LRRC47Q8N1G4 583 aaKnown RBP4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 COPS5Q92905 334 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 MKL1Q969V6 931 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 MCMBPQ9BTE3 642 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 ZSWIM4Q9H7M6 989 aa4.35□□□□□ -1.71
HMGB1P9-201ENST00000429856 TLDC2A0PJX2 215 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 PDPK1O15530 556 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 L1CAMP32004 1257 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 CYP4F8P98187 520 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 SCRN1Q12765 414 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms