RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 SPTLC3Q9NUV7 552 aa5.91□□□□□ -1.46
NUDCD1-202ENST00000427660 COQ6Q9Y2Z9 468 aa5.91□□□□□ -1.46
NUDCD1-202ENST00000427660 ERBB4Q15303 1308 aa5.91□□□□□ -1.46
NUDCD1-202ENST00000427660 TRBV23OR9-2A0A075B6M9 112 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 FZD9O00144 591 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 PIK3R2O00459 728 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 NFICP08651 508 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 VCAM1P19320 739 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 CYP2C19P33261 490 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 BMP8BP34820 402 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 SEPHS1P49903 392 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 TCIRG1Q13488 830 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 GTF2H3Q13889 308 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 KSR1Q8IVT5 923 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 EFHBQ8N7U6 833 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 DIO2Q92813 273 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 IRF7Q92985 503 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 Q96M66 194 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 FCRL3Q96P31 734 aaPredicted RBP5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 NUP88Q99567 741 aaPredicted RBP5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 HDAC8Q9BY41 377 aa5.9□□□□□ -1.46
NUDCD1-202ENST00000427660 VSTM5A8MXK1 200 aa5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 IFRD1O00458 451 aaPredicted RBP5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 RBP3P10745 1247 aa5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 IARSP41252 1262 aaKnown RBP5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 SFRP5Q5T4F7 317 aa5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 CRTC3Q6UUV7 619 aa5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 OVCH1Q7RTY7 1134 aa5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 HDGFL2Q7Z4V5 671 aaPredicted RBP5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 CCDC103Q8IW40 242 aa5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 AGGF1Q8N302 714 aaeCLIP5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 GIMAP7Q8NHV1 300 aa5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 PIWIL2Q8TC59 973 aaKnown RBP5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 SLC5A5Q92911 643 aa5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 IL17RAQ96F46 866 aa5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 MMP19Q99542 508 aa5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 PRDM5Q9NQX1 630 aaPredicted RBP5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 TMEFF2Q9UIK5 374 aaPredicted RBP5.9□□□□□ -1.47
NUDCD1-202ENST00000427660 PTPDC1A2A3K4 754 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 ARNTLO00327 626 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 ERC2O15083 957 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 MSCO60682 206 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 SRGAP2CP0DJJ0 459 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 PLS3P13797 630 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 UVSSAQ2YD98 709 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 C16orf59Q7L2K0 433 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 TOP6BLQ8N6T0 577 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 CLRN3Q8NCR9 226 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 C1orf162Q8NEQ5 155 aaPredicted RBP5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 FBXW5Q969U6 566 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 SARGQ9BW04 601 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 PLVAPQ9BX97 442 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 AKTIPQ9H8T0 292 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 GPATCH2Q9NW75 528 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 CCDC66A2RUB6 948 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 MEIS1O00470 390 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 PF4V1P10720 104 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 GRIK1P39086 918 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 GBX1Q14549 363 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 LYPD4Q6UWN0 246 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 OTOP1Q7RTM1 612 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 TPH2Q8IWU9 490 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 FBLIM1Q8WUP2 373 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 FAM46AQ96IP4 442 aaKnown RBP5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 FAXDC2Q96IV6 333 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 AIFM3Q96NN9 605 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 DUSP23Q9BVJ7 150 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 RRAGCQ9HB90 399 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 VTA1Q9NP79 307 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 RCAN3Q9UKA8 241 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 MINPP1Q9UNW1 487 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 MRFAP1Q9Y605 127 aa5.89□□□□□ -1.47
NUDCD1-202ENST00000427660 TRIM75PA6NK02 468 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 FAM47E-STBD1D6RA91 191 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 TERTO14746 1132 aaKnown RBP5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 SOD2P04179 222 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 IFNGR1P15260 489 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 YBX3P16989 372 aaKnown RBP eCLIP5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 ST5P78524 1137 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 MORC3Q14149 939 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 DDB1Q16531 1140 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 CREB3L3Q68CJ9 461 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 USP33Q8TEY7 942 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 SLC12A9Q9BXP2 914 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 GPR62Q9BZJ7 368 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 UBA5Q9GZZ9 404 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 OXSMQ9NWU1 459 aa5.88□□□□□ -1.47
NUDCD1-202ENST00000427660 GNB5O14775 395 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 DYNC1LI2O43237 492 aaPredicted RBP5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 MT-CO1P00395 513 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 ZNF865P0CJ78 1059 aaPredicted RBP5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 VAV1P15498 845 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 PHKG2P15735 406 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 RBM10P98175 930 aaKnown RBP5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 CDK5R2Q13319 367 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 CLEC16AQ2KHT3 1053 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 PRRT3Q5FWE3 981 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 LINC00114Q6XXX2 140 aa5.87□□□□□ -1.47
NUDCD1-202ENST00000427660 PNMA8AQ86V59 439 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms