RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 DDX41Q9UJV9 622 aaKnown RBP7.6□□□□□ -1.19
LINC00458-202ENST00000427299 SLC12A7Q9Y666 1083 aa7.6□□□□□ -1.19
LINC00458-202ENST00000427299 WIZO95785 1651 aa7.6□□□□□ -1.19
LINC00458-202ENST00000427299 TOP2AP11388 1531 aaKnown RBP7.59□□□□□ -1.19
LINC00458-202ENST00000427299 C2orf71A6NGG8 1288 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 ZBTB7AO95365 584 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 SARSP49591 514 aaKnown RBP7.59□□□□□ -1.19
LINC00458-202ENST00000427299 GRB10Q13322 594 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 COL9A2Q14055 689 aaPredicted RBP7.59□□□□□ -1.19
LINC00458-202ENST00000427299 DPY19L1Q2PZI1 675 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 WWC2Q6AWC2 1192 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 CPNE8Q86YQ8 564 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 ARHGEF39Q8N4T4 335 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 LINC00482Q8N8I6 264 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 C19orf47Q8N9M1 422 aaKnown RBP7.59□□□□□ -1.19
LINC00458-202ENST00000427299 GPR20Q99678 358 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 GINM1Q9NU53 330 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 PALD1Q9ULE6 856 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 PCDHB10Q9UN67 800 aa7.59□□□□□ -1.19
LINC00458-202ENST00000427299 PPM1BO75688 479 aa7.58□□□□□ -1.2
LINC00458-202ENST00000427299 SOX9P48436 509 aa7.58□□□□□ -1.2
LINC00458-202ENST00000427299 SLC7A5Q01650 507 aa7.58□□□□□ -1.2
LINC00458-202ENST00000427299 KLHL6Q8WZ60 621 aa7.58□□□□□ -1.2
LINC00458-202ENST00000427299 ZBTB8AQ96BR9 441 aa7.58□□□□□ -1.2
LINC00458-202ENST00000427299 RCC1LQ96I51 464 aaKnown RBP7.58□□□□□ -1.2
LINC00458-202ENST00000427299 FGD4Q96M96 766 aa7.58□□□□□ -1.2
LINC00458-202ENST00000427299 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.58□□□□□ -1.2
LINC00458-202ENST00000427299 SMARCA4P51532 1647 aa7.57□□□□□ -1.2
LINC00458-202ENST00000427299 A0A1W2PQH9 124 aa7.57□□□□□ -1.2
LINC00458-202ENST00000427299 PAMP19021 973 aa7.57□□□□□ -1.2
LINC00458-202ENST00000427299 GIPRP48546 466 aa7.57□□□□□ -1.2
LINC00458-202ENST00000427299 ADAM17P78536 824 aa7.57□□□□□ -1.2
LINC00458-202ENST00000427299 AMPD2Q01433 879 aa7.57□□□□□ -1.2
LINC00458-202ENST00000427299 ADAT2Q7Z6V5 191 aaKnown RBP7.57□□□□□ -1.2
LINC00458-202ENST00000427299 ADAMTS17Q8TE56 1095 aa7.57□□□□□ -1.2
LINC00458-202ENST00000427299 CRBNQ96SW2 442 aa7.57□□□□□ -1.2
LINC00458-202ENST00000427299 PCGF6Q9BYE7 350 aa7.57□□□□□ -1.2
LINC00458-202ENST00000427299 MROH2BQ7Z745 1585 aa7.56□□□□□ -1.2
LINC00458-202ENST00000427299 TRBV23OR9-2A0A075B6M9 112 aa7.56□□□□□ -1.2
LINC00458-202ENST00000427299 NPHP3-ACAD11A0A0J9YXS1 232 aa7.56□□□□□ -1.2
LINC00458-202ENST00000427299 C7orf72A4D263 438 aa7.56□□□□□ -1.2
LINC00458-202ENST00000427299 C8BP07358 591 aa7.56□□□□□ -1.2
LINC00458-202ENST00000427299 DDX11Q96FC9 970 aa7.56□□□□□ -1.2
LINC00458-202ENST00000427299 GORASP1Q9BQQ3 440 aa7.56□□□□□ -1.2
LINC00458-202ENST00000427299 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
LINC00458-202ENST00000427299 SMPD4Q9NXE4 827 aa7.56□□□□□ -1.2
LINC00458-202ENST00000427299 SIT1Q9Y3P8 196 aa7.56□□□□□ -1.2
LINC00458-202ENST00000427299 NTRK1P04629 796 aa7.55□□□□□ -1.2
LINC00458-202ENST00000427299 CYP2C8P10632 490 aa7.55□□□□□ -1.2
LINC00458-202ENST00000427299 ZEB1P37275 1124 aaPredicted RBP7.55□□□□□ -1.2
LINC00458-202ENST00000427299 EIF6P56537 245 aaKnown RBP7.55□□□□□ -1.2
LINC00458-202ENST00000427299 PAK2Q13177 524 aa7.55□□□□□ -1.2
LINC00458-202ENST00000427299 SMAD4Q13485 552 aaKnown RBP7.55□□□□□ -1.2
LINC00458-202ENST00000427299 MBLAC2Q68D91 279 aa7.55□□□□□ -1.2
LINC00458-202ENST00000427299 TTLL7Q6ZT98 887 aa7.55□□□□□ -1.2
LINC00458-202ENST00000427299 ZNF513Q8N8E2 541 aaPredicted RBP7.55□□□□□ -1.2
LINC00458-202ENST00000427299 TNFRSF1AP19438 455 aa7.54□□□□□ -1.2
LINC00458-202ENST00000427299 RBM10P98175 930 aaKnown RBP7.54□□□□□ -1.2
LINC00458-202ENST00000427299 OR6P1Q8NGX9 317 aa7.54□□□□□ -1.2
LINC00458-202ENST00000427299 PLEKHO2Q8TD55 490 aa7.54□□□□□ -1.2
LINC00458-202ENST00000427299 USP33Q8TEY7 942 aa7.54□□□□□ -1.2
LINC00458-202ENST00000427299 SPATA32Q96LK8 384 aa7.54□□□□□ -1.2
LINC00458-202ENST00000427299 EFR3BQ9Y2G0 817 aa7.54□□□□□ -1.2
LINC00458-202ENST00000427299 NPHS1O60500 1241 aa7.53□□□□□ -1.2
LINC00458-202ENST00000427299 RECKO95980 971 aa7.53□□□□□ -1.2
LINC00458-202ENST00000427299 FUCA1P04066 466 aa7.53□□□□□ -1.2
LINC00458-202ENST00000427299 THBS2P35442 1172 aa7.53□□□□□ -1.2
LINC00458-202ENST00000427299 DPF3Q92784 378 aa7.53□□□□□ -1.2
LINC00458-202ENST00000427299 COPS5Q92905 334 aa7.53□□□□□ -1.2
LINC00458-202ENST00000427299 C11orf84Q9BUA3 381 aaPredicted RBP7.53□□□□□ -1.2
LINC00458-202ENST00000427299 SMARCA5O60264 1052 aaPredicted RBP7.52□□□□□ -1.21
LINC00458-202ENST00000427299 PLATP00750 562 aa7.52□□□□□ -1.21
LINC00458-202ENST00000427299 RPL13P26373 211 aaKnown RBP7.52□□□□□ -1.21
LINC00458-202ENST00000427299 TBC1D10BQ4KMP7 808 aaPredicted RBP7.52□□□□□ -1.21
LINC00458-202ENST00000427299 ETV3LQ6ZN32 361 aa7.52□□□□□ -1.21
LINC00458-202ENST00000427299 MIB1Q86YT6 1006 aa7.52□□□□□ -1.21
LINC00458-202ENST00000427299 DCP2Q8IU60 420 aaKnown RBP7.52□□□□□ -1.21
LINC00458-202ENST00000427299 ZNF654Q8IZM8 581 aa7.52□□□□□ -1.21
LINC00458-202ENST00000427299 TTC9BQ8N6N2 239 aa7.52□□□□□ -1.21
LINC00458-202ENST00000427299 RASGRP4Q8TDF6 673 aa7.52□□□□□ -1.21
LINC00458-202ENST00000427299 SYT3Q9BQG1 590 aa7.52□□□□□ -1.21
LINC00458-202ENST00000427299 C1QTNF3Q9BXJ4 246 aa7.52□□□□□ -1.21
LINC00458-202ENST00000427299 CLEC1BQ9P126 229 aa7.52□□□□□ -1.21
LINC00458-202ENST00000427299 APEX2Q9UBZ4 518 aa7.52□□□□□ -1.21
LINC00458-202ENST00000427299 RGL3Q3MIN7 710 aa7.51□□□□□ -1.21
LINC00458-202ENST00000427299 SAMD11Q96NU1 681 aa7.51□□□□□ -1.21
LINC00458-202ENST00000427299 MMP19Q99542 508 aa7.51□□□□□ -1.21
LINC00458-202ENST00000427299 PCDH18Q9HCL0 1135 aa7.51□□□□□ -1.21
LINC00458-202ENST00000427299 SUGT1Q9Y2Z0 365 aa7.51□□□□□ -1.21
LINC00458-202ENST00000427299 ANKRD34BA5PLL1 514 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 C1QTNF3-AMACRE9PGA6 284 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 MATN3O15232 486 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 PLS3P13797 630 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 FAM26FQ5R3K3 315 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 CPZQ66K79 652 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 FAM26EQ8N5C1 309 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 KYQ8NBH2 561 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 SHDQ96IW2 340 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 GPRC5CQ9NQ84 441 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 MARCH2Q9P0N8 246 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms