RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 HOXA13P31271 388 aaPredicted RBP27.57■■■□□ 2
APOE-202ENST00000425718 CLK2P49760 499 aaKnown RBP27.57■■■□□ 2
APOE-202ENST00000425718 ALDH5A1P51649 535 aaPredicted RBP27.57■■■□□ 2
APOE-202ENST00000425718 MFSD14CQ5VZR4 134 aa27.57■■■□□ 2
APOE-202ENST00000425718 XRRA1Q6P2D8 792 aa27.57■■■□□ 2
APOE-202ENST00000425718 FBXO46Q6PJ61 603 aaPredicted RBP27.57■■■□□ 2
APOE-202ENST00000425718 MAMDC4Q6UXC1 1216 aa27.57■■■□□ 2
APOE-202ENST00000425718 FCHSD1Q86WN1 690 aa27.57■■■□□ 2
APOE-202ENST00000425718 ADCY3O60266 1144 aa27.56■■■□□ 2
APOE-202ENST00000425718 CNTN2Q02246 1040 aa27.56■■■□□ 2
APOE-202ENST00000425718 KRT25Q7Z3Z0 450 aa27.56■■■□□ 2
APOE-202ENST00000425718 PXMP2Q9NR77 195 aa27.56■■■□□ 2
APOE-202ENST00000425718 NRBP1Q9UHY1 535 aa27.56■■■□□ 2
APOE-202ENST00000425718 MYH7BA7E2Y1 1941 aa27.56■■■□□ 2
APOE-202ENST00000425718 FRMPD4Q14CM0 1322 aa27.56■■■□□ 2
APOE-202ENST00000425718 STAM2O75886 525 aa27.55■■■□□ 2
APOE-202ENST00000425718 CAP1Q01518 475 aa27.55■■■□□ 2
APOE-202ENST00000425718 UBE2SQ16763 222 aa27.55■■■□□ 2
APOE-202ENST00000425718 NPLOC4Q8TAT6 608 aa27.55■■■□□ 2
APOE-202ENST00000425718 TAAR1Q96RJ0 339 aa27.55■■■□□ 2
APOE-202ENST00000425718 TINF2Q9BSI4 451 aa27.55■■■□□ 2
APOE-202ENST00000425718 PCDHA6Q9UN73 950 aa27.55■■■□□ 2
APOE-202ENST00000425718 KCNJ14Q9UNX9 436 aa27.55■■■□□ 2
APOE-202ENST00000425718 PCDHA8Q9Y5H6 950 aa27.55■■■□□ 2
APOE-202ENST00000425718 KIAA1217Q5T5P2 1943 aa27.55■■■□□ 2
APOE-202ENST00000425718 SOWAHBA6NEL2 793 aa27.54■■■□□ 2
APOE-202ENST00000425718 HMGCRP04035 888 aa27.54■■■□□ 2
APOE-202ENST00000425718 GNL2Q13823 731 aaKnown RBP27.54■■■□□ 2
APOE-202ENST00000425718 MORC4Q8TE76 937 aa27.54■■■□□ 2
APOE-202ENST00000425718 FOXP1Q9H334 677 aaPredicted RBP27.54■■■□□ 2
APOE-202ENST00000425718 BIN2Q9UBW5 565 aaPredicted RBP27.54■■■□□ 2
APOE-202ENST00000425718 CCDC194A0A1B0GVG4 234 aa27.53■■■□□ 2
APOE-202ENST00000425718 CCND2P30279 289 aa27.53■■■□□ 2
APOE-202ENST00000425718 GRK4P32298 578 aa27.53■■■□□ 2
APOE-202ENST00000425718 PDE4DQ08499 809 aa27.53■■■□□ 2
APOE-202ENST00000425718 ANO3Q9BYT9 981 aa27.53■■■□□ 2
APOE-202ENST00000425718 COL20A1Q9P218 1284 aa27.53■■■□□ 2
APOE-202ENST00000425718 CNPY2Q9Y2B0 182 aa27.53■■■□□ 2
APOE-202ENST00000425718 RPTORQ8N122 1335 aa27.52■■■□□ 2
APOE-202ENST00000425718 STXBP2Q15833 593 aa27.52■■■□□ 2
APOE-202ENST00000425718 JAKMIP3Q5VZ66 844 aa27.52■■■□□ 2
APOE-202ENST00000425718 DIS3L2Q8IYB7 885 aaKnown RBP27.52■■■□□ 2
APOE-202ENST00000425718 PDCD2LQ9BRP1 358 aa27.52■■■□□ 2
APOE-202ENST00000425718 TSHZ2Q9NRE2 1034 aa27.52■■■□□ 2
APOE-202ENST00000425718 PTCH2Q9Y6C5 1203 aa27.52■■■□□ 2
APOE-202ENST00000425718 EDNRBP24530 442 aa27.51■■□□□ 1.99
APOE-202ENST00000425718 UBXN2AP68543 259 aa27.51■■□□□ 1.99
APOE-202ENST00000425718 NPY5RQ15761 445 aa27.51■■□□□ 1.99
APOE-202ENST00000425718 ARMCX2Q7L311 632 aa27.51■■□□□ 1.99
APOE-202ENST00000425718 SHISA4Q96DD7 197 aa27.51■■□□□ 1.99
APOE-202ENST00000425718 FGD4Q96M96 766 aa27.51■■□□□ 1.99
APOE-202ENST00000425718 NAP1L4Q99733 375 aaKnown RBP27.51■■□□□ 1.99
APOE-202ENST00000425718 ABHD16BQ9H3Z7 469 aa27.51■■□□□ 1.99
APOE-202ENST00000425718 M0R2N6 131 aa27.5■■□□□ 1.99
APOE-202ENST00000425718 NR3C2P08235 984 aa27.5■■□□□ 1.99
APOE-202ENST00000425718 EIF2AK2P19525 551 aaKnown RBP27.5■■□□□ 1.99
APOE-202ENST00000425718 SREBF1P36956 1147 aa27.5■■□□□ 1.99
APOE-202ENST00000425718 FOSBP53539 338 aa27.5■■□□□ 1.99
APOE-202ENST00000425718 PGM5Q15124 567 aa27.5■■□□□ 1.99
APOE-202ENST00000425718 NONOQ15233 471 aaKnown RBP eCLIP27.5■■□□□ 1.99
APOE-202ENST00000425718 SLC9C1Q4G0N8 1177 aa27.5■■□□□ 1.99
APOE-202ENST00000425718 PCNX4Q63HM2 1172 aa27.5■■□□□ 1.99
APOE-202ENST00000425718 VTA1Q9NP79 307 aa27.5■■□□□ 1.99
APOE-202ENST00000425718 FOXD4L1Q9NU39 408 aa27.5■■□□□ 1.99
APOE-202ENST00000425718 RBM19Q9Y4C8 960 aaKnown RBP27.5■■□□□ 1.99
APOE-202ENST00000425718 LRRC37A2A6NM11 1700 aa27.5■■□□□ 1.99
APOE-202ENST00000425718 DTNBO60941 627 aa27.49■■□□□ 1.99
APOE-202ENST00000425718 EIF3JO75822 258 aaKnown RBP27.49■■□□□ 1.99
APOE-202ENST00000425718 GNPTABQ3T906 1256 aa27.49■■□□□ 1.99
APOE-202ENST00000425718 TRIB2Q92519 343 aa27.49■■□□□ 1.99
APOE-202ENST00000425718 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.49■■□□□ 1.99
APOE-202ENST00000425718 USP11P51784 963 aa27.48■■□□□ 1.99
APOE-202ENST00000425718 GUCY1B3Q02153 619 aa27.48■■□□□ 1.99
APOE-202ENST00000425718 VSIG10LQ86VR7 867 aa27.48■■□□□ 1.99
APOE-202ENST00000425718 GJB4Q9NTQ9 266 aa27.48■■□□□ 1.99
APOE-202ENST00000425718 IGHA2P01877 340 aa27.47■■□□□ 1.99
APOE-202ENST00000425718 CYP3A4P08684 503 aa27.47■■□□□ 1.99
APOE-202ENST00000425718 SYT1P21579 422 aa27.47■■□□□ 1.99
APOE-202ENST00000425718 CCL14Q16627 93 aa27.47■■□□□ 1.99
APOE-202ENST00000425718 KCNV1Q6PIU1 500 aa27.47■■□□□ 1.99
APOE-202ENST00000425718 TMEM260Q9NX78 707 aa27.47■■□□□ 1.99
APOE-202ENST00000425718 ASTN1O14525 1302 aa27.46■■□□□ 1.99
APOE-202ENST00000425718 BTBD18B2RXH4 712 aa27.46■■□□□ 1.99
APOE-202ENST00000425718 STX6O43752 255 aa27.46■■□□□ 1.99
APOE-202ENST00000425718 MYCLP12524 364 aaPredicted RBP27.46■■□□□ 1.99
APOE-202ENST00000425718 U2AF2P26368 475 aaKnown RBP eCLIP27.46■■□□□ 1.99
APOE-202ENST00000425718 ARHGAP4P98171 946 aa27.46■■□□□ 1.99
APOE-202ENST00000425718 MCTP1Q6DN14 999 aa27.46■■□□□ 1.99
APOE-202ENST00000425718 RASGRP4Q8TDF6 673 aa27.46■■□□□ 1.99
APOE-202ENST00000425718 CDHR1Q96JP9 859 aa27.46■■□□□ 1.99
APOE-202ENST00000425718 PURBQ96QR8 312 aaKnown RBP27.46■■□□□ 1.99
APOE-202ENST00000425718 FLRT1Q9NZU1 646 aa27.46■■□□□ 1.99
APOE-202ENST00000425718 VPS37CA5D8V6 355 aaPredicted RBP27.45■■□□□ 1.98
APOE-202ENST00000425718 ELNP15502 786 aa27.45■■□□□ 1.98
APOE-202ENST00000425718 ZNF76P36508 570 aa27.45■■□□□ 1.98
APOE-202ENST00000425718 MOXD1Q6UVY6 613 aa27.45■■□□□ 1.98
APOE-202ENST00000425718 NLRX1Q86UT6 975 aa27.45■■□□□ 1.98
APOE-202ENST00000425718 NOSTRINQ8IVI9 506 aa27.45■■□□□ 1.98
APOE-202ENST00000425718 NOL7Q9UMY1 257 aaKnown RBP27.45■■□□□ 1.98
APOE-202ENST00000425718 MAFGO15525 162 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms