RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 DNAJC25-GNG10A0A024R161 153 aa14.88□□□□□ -0.03
SGCE-203ENST00000425444 ICAM1P05362 532 aa14.88□□□□□ -0.03
SGCE-203ENST00000425444 ALADP13716 330 aa14.88□□□□□ -0.03
SGCE-203ENST00000425444 SSTR3P32745 418 aaPredicted RBP14.88□□□□□ -0.03
SGCE-203ENST00000425444 GJA9P57773 515 aa14.88□□□□□ -0.03
SGCE-203ENST00000425444 ZNF543Q08ER8 600 aa14.88□□□□□ -0.03
SGCE-203ENST00000425444 TRDNQ13061 729 aa14.88□□□□□ -0.03
SGCE-203ENST00000425444 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.88□□□□□ -0.03
SGCE-203ENST00000425444 DGKHQ86XP1 1220 aa14.88□□□□□ -0.03
SGCE-203ENST00000425444 PNMA1Q8ND90 353 aa14.88□□□□□ -0.03
SGCE-203ENST00000425444 ZSCAN10Q96SZ4 725 aaPredicted RBP14.88□□□□□ -0.03
SGCE-203ENST00000425444 NOC4LQ9BVI4 516 aaKnown RBP14.88□□□□□ -0.03
SGCE-203ENST00000425444 RANBP17Q9H2T7 1088 aaKnown RBP14.88□□□□□ -0.03
SGCE-203ENST00000425444 A1CFQ9NQ94 594 aaKnown RBP14.88□□□□□ -0.03
SGCE-203ENST00000425444 SGSM2O43147 1006 aa14.87□□□□□ -0.03
SGCE-203ENST00000425444 ADCY6O43306 1168 aa14.87□□□□□ -0.03
SGCE-203ENST00000425444 ACVR2BQ13705 512 aa14.87□□□□□ -0.03
SGCE-203ENST00000425444 BTNL9Q6UXG8 535 aa14.87□□□□□ -0.03
SGCE-203ENST00000425444 ZNF467Q7Z7K2 595 aaPredicted RBP14.87□□□□□ -0.03
SGCE-203ENST00000425444 UPF3AQ9H1J1 476 aaKnown RBP14.87□□□□□ -0.03
SGCE-203ENST00000425444 WNT8AQ9H1J5 351 aa14.87□□□□□ -0.03
SGCE-203ENST00000425444 ZSWIM5Q9P217 1185 aa14.87□□□□□ -0.03
SGCE-203ENST00000425444 U3KPZ7 1027 aaPredicted RBP14.87□□□□□ -0.03
SGCE-203ENST00000425444 MCM3APO60318 1980 aa14.86□□□□□ -0.03
SGCE-203ENST00000425444 SNHG28P0DPA3 235 aa14.86□□□□□ -0.03
SGCE-203ENST00000425444 PTH1RQ03431 593 aa14.86□□□□□ -0.03
SGCE-203ENST00000425444 GRB10Q13322 594 aa14.86□□□□□ -0.03
SGCE-203ENST00000425444 TTLL4Q14679 1199 aa14.86□□□□□ -0.03
SGCE-203ENST00000425444 CCDC144BQ3MJ40 725 aa14.86□□□□□ -0.03
SGCE-203ENST00000425444 GPATCH4Q5T3I0 446 aaKnown RBP14.86□□□□□ -0.03
SGCE-203ENST00000425444 IFIT1BQ5T764 474 aaKnown RBP14.86□□□□□ -0.03
SGCE-203ENST00000425444 NSMFQ6X4W1 530 aa14.86□□□□□ -0.03
SGCE-203ENST00000425444 RALYLQ86SE5 291 aaKnown RBP14.86□□□□□ -0.03
SGCE-203ENST00000425444 ENAHQ8N8S7 591 aaPredicted RBP14.86□□□□□ -0.03
SGCE-203ENST00000425444 SCLYQ96I15 445 aa14.86□□□□□ -0.03
SGCE-203ENST00000425444 TRPV6Q9H1D0 765 aa14.86□□□□□ -0.03
SGCE-203ENST00000425444 KCNH6Q9H252 994 aa14.86□□□□□ -0.03
SGCE-203ENST00000425444 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.86□□□□□ -0.03
SGCE-203ENST00000425444 CACNA1HO95180 2353 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 GOLGA8HP0CJ92 632 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 BEX3Q00994 111 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 CNTN2Q02246 1040 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 TAP1Q03518 808 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 MUM1L1Q5H9M0 696 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 CXCL17Q6UXB2 119 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 MAMDC4Q6UXC1 1216 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 KIAA1211Q6ZU35 1233 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 ARMCX2Q7L311 632 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 FAM178BQ8IXR5 827 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 SLC43A3Q8NBI5 491 aa14.85□□□□□ -0.03
SGCE-203ENST00000425444 DHX16O60231 1041 aaKnown RBP14.84□□□□□ -0.03
SGCE-203ENST00000425444 CYP21A2P08686 494 aa14.84□□□□□ -0.03
SGCE-203ENST00000425444 ITGA7Q13683 1181 aa14.84□□□□□ -0.03
SGCE-203ENST00000425444 ASPRV1Q53RT3 343 aa14.84□□□□□ -0.03
SGCE-203ENST00000425444 NOL8Q76FK4 1167 aaKnown RBP14.84□□□□□ -0.03
SGCE-203ENST00000425444 DEFB128Q7Z7B8 93 aa14.84□□□□□ -0.03
SGCE-203ENST00000425444 CCDC144CPQ8IYA2 1237 aa14.84□□□□□ -0.03
SGCE-203ENST00000425444 FAM133AQ8N9E0 248 aa14.84□□□□□ -0.03
SGCE-203ENST00000425444 VWCEQ96DN2 955 aa14.84□□□□□ -0.03
SGCE-203ENST00000425444 ABHD16BQ9H3Z7 469 aa14.84□□□□□ -0.03
SGCE-203ENST00000425444 CYP39A1Q9NYL5 469 aa14.84□□□□□ -0.03
SGCE-203ENST00000425444 PNMA2Q9UL42 364 aa14.84□□□□□ -0.03
SGCE-203ENST00000425444 RIF1Q5UIP0 2472 aaKnown RBP14.84□□□□□ -0.03
SGCE-203ENST00000425444 ERICH2A1L162 156 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 PTPDC1A2A3K4 754 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 ASB14A6NK59 587 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 CTAGE5O15320 804 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 B4GALT4O60513 344 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 ARHGEF15O94989 841 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 PARP1P09874 1014 aaKnown RBP14.83□□□□□ -0.04
SGCE-203ENST00000425444 SKAP1Q86WV1 359 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 NCOA7Q8NI08 942 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 ANKS1AQ92625 1134 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 CCDC136Q96JN2 1154 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 FGD4Q96M96 766 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 UBA5Q9GZZ9 404 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 CPVLQ9H3G5 476 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 RBM8AQ9Y5S9 174 aaKnown RBP14.83□□□□□ -0.04
SGCE-203ENST00000425444 WDR19Q8NEZ3 1342 aa14.83□□□□□ -0.04
SGCE-203ENST00000425444 SOWAHBA6NEL2 793 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 KIF28PB7ZC32 967 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 E7EWF7 191 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 NFIBO00712 420 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 IFIT3O14879 490 aaKnown RBP14.82□□□□□ -0.04
SGCE-203ENST00000425444 LPXNO60711 386 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 CABYRO75952 493 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 NEFLP07196 543 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 PFKMP08237 780 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 ACTN1P12814 892 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 SART3Q15020 963 aaKnown RBP14.82□□□□□ -0.04
SGCE-203ENST00000425444 CDC37Q16543 378 aaPredicted RBP14.82□□□□□ -0.04
SGCE-203ENST00000425444 USH1GQ495M9 461 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 CYB5R4Q7L1T6 521 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 MAP4K1Q92918 833 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 SLC9A7Q96T83 725 aa14.82□□□□□ -0.04
SGCE-203ENST00000425444 UBE2ZQ9H832 354 aaPredicted RBP14.82□□□□□ -0.04
SGCE-203ENST00000425444 MYO15AQ9UKN7 3530 aa14.81□□□□□ -0.04
SGCE-203ENST00000425444 DCXO43602 365 aa14.81□□□□□ -0.04
SGCE-203ENST00000425444 KCNA5P22460 613 aa14.81□□□□□ -0.04
SGCE-203ENST00000425444 BAATQ14032 418 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms