RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 HOMER2Q9NSB8 354 aa16.32■□□□□ 0.2
SSX2IP-202ENST00000422026 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 PFASO15067 1338 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 FRMPD4Q14CM0 1322 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 TESPA1A2RU30 521 aaPredicted RBP16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 WNT7AO00755 349 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 TBX3O15119 743 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 CTAGE5O15320 804 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 TAL1P17542 331 aaPredicted RBP16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 ZNF76P36508 570 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 ZNF157P51786 506 aaPredicted RBP16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 FSTL1Q12841 308 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 Q4G0T1 1027 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 MUM1L1Q5H9M0 696 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 XRRA1Q6P2D8 792 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 SHC4Q6S5L8 630 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 RASAL3Q86YV0 1011 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 SLFN12Q8IYM2 578 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 CCDC102AQ96A19 550 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 PARK7Q99497 189 aaKnown RBP16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 SPATC1LQ9H0A9 340 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 NUP62CLQ9H1M0 184 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 DACT1Q9NYF0 836 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 TLL2Q9Y6L7 1015 aa16.31■□□□□ 0.2
SSX2IP-202ENST00000422026 RPTORQ8N122 1335 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 VWA3AA6NCI4 1184 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 PDHXO00330 501 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 MARCH6O60337 910 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 TDP2O95551 362 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 PFKFB1P16118 471 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 LIG1P18858 919 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 SYKP43405 635 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 INHBEP58166 350 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 RPS6P62753 249 aaKnown RBP16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 CCNA1P78396 465 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 SETQ01105 290 aaPredicted RBP16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 TPRNQ4KMQ1 711 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 NSMFQ6X4W1 530 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 SHCBP1Q8NEM2 672 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 SYTL5Q8TDW5 730 aaPredicted RBP16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 SMCR8Q8TEV9 937 aaPredicted RBP16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 BRI3BPQ8WY22 251 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 TIGD1Q96MW7 591 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 CSRNP2Q9H175 543 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 TMEM63CQ9P1W3 806 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 USP25Q9UHP3 1055 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 HPSEQ9Y251 543 aa16.3■□□□□ 0.2
SSX2IP-202ENST00000422026 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 BTBD19C9JJ37 291 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 ENGASEQ8NFI3 743 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 CLIC6Q96NY7 704 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 MTMR9Q96QG7 549 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 GOLPH3LQ9H4A5 285 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 CLSTN2Q9H4D0 955 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 MROH8Q9H579 483 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 BTBD7Q9P203 1132 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 HOOK1Q9UJC3 728 aaKnown RBP16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 KCNH3Q9ULD8 1083 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 RIPK3Q9Y572 518 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 STK24Q9Y6E0 443 aa16.29■□□□□ 0.2
SSX2IP-202ENST00000422026 A0A1B0GVL5 298 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 NR1I2O75469 434 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 SLC10A3P09131 477 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 FXR2P51116 673 aaKnown RBP eCLIP16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 NDUFA8P51970 172 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 ZSCAN23Q3MJ62 389 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 PCNX4Q63HM2 1172 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 NIPA1Q7RTP0 329 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 ELOA2Q8IYF1 753 aaPredicted RBP16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 TBC1D5Q92609 795 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 FAM20AQ96MK3 541 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 PAGR1Q9BTK6 254 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 TMEM60Q9H2L4 133 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 TNMDQ9H2S6 317 aa16.28■□□□□ 0.2
SSX2IP-202ENST00000422026 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 B4DLN1 442 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 SLC26A4O43511 780 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 SLC37A4O43826 429 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 EDIL3O43854 480 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 CNMDO75829 334 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 STAM2O75886 525 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 ZNF445P59923 1031 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 SREBF2Q12772 1141 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 MKRN3Q13064 507 aaKnown RBP16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 SNW1Q13573 536 aaKnown RBP16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 BAATQ14032 418 aaPredicted RBP16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 PDIA5Q14554 519 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 KANK3Q6NY19 840 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 SLC30A10Q6XR72 485 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 NCAPG2Q86XI2 1143 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 DNERQ8NFT8 737 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 NSUN6Q8TEA1 469 aaKnown RBP16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 MPHOSPH6Q99547 160 aaKnown RBP16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 GZF1Q9H116 711 aaPredicted RBP16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 KCNMB3Q9NPA1 279 aa16.27■□□□□ 0.2
SSX2IP-202ENST00000422026 A1CFQ9NQ94 594 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms