RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 SRGAP2BP0DMP2 458 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 AFG1LQ8WV93 481 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 CSRNP1Q96S65 589 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 RAB17Q9H0T7 212 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 RASSF4Q9H2L5 321 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 RAD18Q9NS91 495 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 OR6B2Q6IFH4 312 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 SYTL2Q9HCH5 934 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 MYL7Q01449 175 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 PTK2BQ14289 1009 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 ZWILCHQ9H900 591 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 AGRPO00253 132 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 UBE3AQ05086 875 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 ZNF790Q6PG37 636 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 MYOCDQ8IZQ8 938 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 HIPK4Q8NE63 616 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 CDKL2Q92772 493 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 ABHD8Q96I13 439 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 ARMC9Q7Z3E5 817 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 SRPK1Q96SB4 655 aaKnown RBP20.09■□□□□ 0.81
SHANK3-202ENST00000414786 CFAP69A5D8W1 941 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 TRIM14Q14142 442 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 TAGAPQ8N103 731 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 ELMOD1Q8N336 334 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 ZNF577Q9BSK1 485 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 KLHL14Q9P2G3 628 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 VGLL3A8MV65 326 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 PRPF4O43172 522 aaKnown RBP eCLIP20.09■□□□□ 0.811e-6■■■■□ 19.5
SHANK3-202ENST00000414786 KCTD16Q68DU8 428 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 PLBD2Q8NHP8 589 aa20.09■□□□□ 0.81
SHANK3-202ENST00000414786 TMED2Q15363 201 aa20.08■□□□□ 0.81
SHANK3-202ENST00000414786 PARP10Q53GL7 1025 aa20.08■□□□□ 0.81
SHANK3-202ENST00000414786 KRT40Q6A162 431 aa20.08■□□□□ 0.81
SHANK3-202ENST00000414786 LRRC8CQ8TDW0 803 aa20.08■□□□□ 0.81
SHANK3-202ENST00000414786 APPBP2Q92624 585 aa20.08■□□□□ 0.81
SHANK3-202ENST00000414786 TTC41PQ6P2S7 1318 aa20.08■□□□□ 0.81
SHANK3-202ENST00000414786 LRRC41Q15345 812 aa20.08■□□□□ 0.81
SHANK3-202ENST00000414786 DEPDC1BQ8WUY9 529 aa20.08■□□□□ 0.81
SHANK3-202ENST00000414786 NSFP46459 744 aaKnown RBP20.08■□□□□ 0.8
SHANK3-202ENST00000414786 RAPGEF5Q92565 580 aa20.08■□□□□ 0.8
SHANK3-202ENST00000414786 TTC1Q99614 292 aa20.08■□□□□ 0.8
SHANK3-202ENST00000414786 HIF1AQ16665 826 aa20.08■□□□□ 0.8
SHANK3-202ENST00000414786 LPIN2Q92539 896 aa20.08■□□□□ 0.8
SHANK3-202ENST00000414786 SH3KBP1Q96B97 665 aa20.08■□□□□ 0.8
SHANK3-202ENST00000414786 QTRT2Q9H974 415 aaKnown RBP20.08■□□□□ 0.8
SHANK3-202ENST00000414786 SLC4A7Q9Y6M7 1214 aa20.08■□□□□ 0.8
SHANK3-202ENST00000414786 NESP48681 1621 aa20.08■□□□□ 0.8
SHANK3-202ENST00000414786 KCNJ18B7U540 433 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 KCNJ12Q14500 433 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 ODR4Q5SWX8 454 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 ADALQ6DHV7 355 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 CDC37L1Q7L3B6 337 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 SIX6OS1Q8N1H7 587 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 ZNF507Q8TCN5 953 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 ORAI2Q96SN7 254 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 ERBB3P21860 1342 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 TFDP1Q14186 410 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 SUCLG2Q96I99 432 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 GPR101Q96P66 508 aaPredicted RBP20.07■□□□□ 0.8
SHANK3-202ENST00000414786 ATG3Q9NT62 314 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 OAS2P29728 719 aaKnown RBP20.07■□□□□ 0.8
SHANK3-202ENST00000414786 RINLQ6ZS11 566 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 RETREG2Q8NC44 543 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 STAG1Q8WVM7 1258 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 BCAP29Q9UHQ4 241 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 PCDHA1Q9Y5I3 950 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 GOLGA8IPA6NC78 632 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 GOLGA8JA6NMD2 632 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 RASGRP4Q8TDF6 673 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 CBX8Q9HC52 389 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 KIAA1024Q9UPX6 916 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 HOXC9P31274 260 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 SSTR3P32745 418 aaPredicted RBP20.07■□□□□ 0.8
SHANK3-202ENST00000414786 SLFN13Q68D06 897 aa20.07■□□□□ 0.8
SHANK3-202ENST00000414786 CUTAO60888 179 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 RAP1GDS1P52306 607 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 NLRP12P59046 1061 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 ARHGEF18Q6ZSZ5 1173 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 KMT5AQ9NQR1 393 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 PPP1R9AQ9ULJ8 1098 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 CAPN7Q9Y6W3 813 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 GNGT1P63211 74 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 MORC3Q14149 939 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 GLE1Q53GS7 698 aaKnown RBP20.06■□□□□ 0.8
SHANK3-202ENST00000414786 FAM117BQ6P1L5 589 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 NUDCD3Q8IVD9 361 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.06■□□□□ 0.84e-6■■■■□ 22.6
SHANK3-202ENST00000414786 MAIP1Q8WWC4 291 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 SLC10A4Q96EP9 437 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 DISP3Q9P2K9 1392 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 MOCS3O95396 460 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 LRCH2Q5VUJ6 765 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 DNAJC7Q99615 494 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 SBNO1A3KN83 1393 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 GTPBP6O43824 516 aaPredicted RBP20.06■□□□□ 0.8
SHANK3-202ENST00000414786 DDIT3P35638 169 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 RASSF7Q02833 373 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 GRK7Q8WTQ7 553 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 PYGLP06737 847 aa20.06■□□□□ 0.8
SHANK3-202ENST00000414786 OCRLQ01968 901 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms