RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 NPM2Q86SE8 214 aaKnown RBP6.8□□□□□ -1.32
CLK1-203ENST00000409769 LZTR1Q8N653 840 aa6.8□□□□□ -1.32
CLK1-203ENST00000409769 RCC1LQ96I51 464 aaKnown RBP6.8□□□□□ -1.32
CLK1-203ENST00000409769 KLHL25Q9H0H3 589 aa6.8□□□□□ -1.32
CLK1-203ENST00000409769 USP40Q9NVE5 1235 aa6.8□□□□□ -1.32
CLK1-203ENST00000409769 FAM86C1Q9NVL1 165 aa6.8□□□□□ -1.32
CLK1-203ENST00000409769 BACE2Q9Y5Z0 518 aa6.8□□□□□ -1.32
CLK1-203ENST00000409769 ATF2P15336 505 aa6.79□□□□□ -1.32
CLK1-203ENST00000409769 TACR1P25103 407 aa6.79□□□□□ -1.32
CLK1-203ENST00000409769 SLC7A5Q01650 507 aa6.79□□□□□ -1.32
CLK1-203ENST00000409769 EFEMP1Q12805 493 aa6.79□□□□□ -1.32
CLK1-203ENST00000409769 PPP2R5DQ14738 602 aa6.79□□□□□ -1.32
CLK1-203ENST00000409769 CPA5Q8WXQ8 436 aa6.79□□□□□ -1.32
CLK1-203ENST00000409769 ADAM7Q9H2U9 754 aa6.79□□□□□ -1.32
CLK1-203ENST00000409769 PRKAG3Q9UGI9 489 aa6.79□□□□□ -1.32
CLK1-203ENST00000409769 PLA2G1BP04054 148 aaKnown RBP6.78□□□□□ -1.32
CLK1-203ENST00000409769 ASGR2P07307 311 aa6.78□□□□□ -1.32
CLK1-203ENST00000409769 PAMP19021 973 aa6.78□□□□□ -1.32
CLK1-203ENST00000409769 DNAJA1P31689 397 aaKnown RBP6.78□□□□□ -1.32
CLK1-203ENST00000409769 AMPD2Q01433 879 aa6.78□□□□□ -1.32
CLK1-203ENST00000409769 PLP2Q04941 152 aa6.78□□□□□ -1.32
CLK1-203ENST00000409769 ADAT2Q7Z6V5 191 aaKnown RBP6.78□□□□□ -1.32
CLK1-203ENST00000409769 ANAPC16Q96DE5 110 aa6.78□□□□□ -1.32
CLK1-203ENST00000409769 PCDH18Q9HCL0 1135 aa6.78□□□□□ -1.32
CLK1-203ENST00000409769 HCFC2Q9Y5Z7 792 aa6.78□□□□□ -1.32
CLK1-203ENST00000409769 C2orf71A6NGG8 1288 aa6.77□□□□□ -1.33
CLK1-203ENST00000409769 ARHGEF39Q8N4T4 335 aa6.77□□□□□ -1.33
CLK1-203ENST00000409769 CRACR2BQ8N4Y2 399 aaPredicted RBP6.77□□□□□ -1.33
CLK1-203ENST00000409769 ADCY4Q8NFM4 1077 aa6.77□□□□□ -1.33
CLK1-203ENST00000409769 ARMC5Q96C12 935 aa6.77□□□□□ -1.33
CLK1-203ENST00000409769 BDH2Q9BUT1 245 aa6.77□□□□□ -1.33
CLK1-203ENST00000409769 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.77□□□□□ -1.33
CLK1-203ENST00000409769 CGGBP1Q9UFW8 167 aaPredicted RBP6.77□□□□□ -1.33
CLK1-203ENST00000409769 STXBP3O00186 592 aa6.76□□□□□ -1.33
CLK1-203ENST00000409769 NAT2P11245 290 aa6.76□□□□□ -1.33
CLK1-203ENST00000409769 ETFBP38117 255 aa6.76□□□□□ -1.33
CLK1-203ENST00000409769 NFKB2Q00653 900 aa6.76□□□□□ -1.33
CLK1-203ENST00000409769 RTP5Q14D33 572 aa6.76□□□□□ -1.33
CLK1-203ENST00000409769 UBXN11Q5T124 520 aa6.76□□□□□ -1.33
CLK1-203ENST00000409769 NT5DC1Q5TFE4 455 aa6.76□□□□□ -1.33
CLK1-203ENST00000409769 ZNF408Q9H9D4 720 aa6.76□□□□□ -1.33
CLK1-203ENST00000409769 PRDM2Q13029 1718 aa6.76□□□□□ -1.33
CLK1-203ENST00000409769 NPHP3-ACAD11A0A0J9YXS1 232 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 SMAD7O15105 426 aaKnown RBP6.75□□□□□ -1.33
CLK1-203ENST00000409769 NPHS1O60500 1241 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 EPHX1P07099 455 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 PMLP29590 882 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 POMZP3Q6PJE2 187 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 TTLL7Q6ZT98 887 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 CARFQ8N187 725 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 KLHL6Q8WZ60 621 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 MTA3Q9BTC8 594 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 MCMBPQ9BTE3 642 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 NTMQ9P121 344 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 SUGT1Q9Y2Z0 365 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 RWDD3Q9Y3V2 267 aa6.75□□□□□ -1.33
CLK1-203ENST00000409769 VAMP4O75379 141 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 ZNF143P52747 638 aaPredicted RBP6.74□□□□□ -1.33
CLK1-203ENST00000409769 GJA9P57773 515 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 CACNB2Q08289 660 aaPredicted RBP6.74□□□□□ -1.33
CLK1-203ENST00000409769 NCAPHQ15003 741 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 PPP2R5EQ16537 467 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 DPY19L1Q2PZI1 675 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 WWC2Q6AWC2 1192 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 USP33Q8TEY7 942 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 ZNF526Q8TF50 670 aaPredicted RBP6.74□□□□□ -1.33
CLK1-203ENST00000409769 SPATA25Q9BR10 227 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 ACTR10Q9NZ32 417 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 PALD1Q9ULE6 856 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 MRVI1Q9Y6F6 885 aa6.74□□□□□ -1.33
CLK1-203ENST00000409769 CFTRP13569 1480 aa6.73□□□□□ -1.33
CLK1-203ENST00000409769 ANKRD34BA5PLL1 514 aa6.73□□□□□ -1.33
CLK1-203ENST00000409769 K7ESM1 405 aa6.73□□□□□ -1.33
CLK1-203ENST00000409769 MC3RP41968 323 aa6.73□□□□□ -1.33
CLK1-203ENST00000409769 DLX2Q07687 328 aaPredicted RBP6.73□□□□□ -1.33
CLK1-203ENST00000409769 DCP2Q8IU60 420 aaKnown RBP6.73□□□□□ -1.33
CLK1-203ENST00000409769 SMARCC2Q8TAQ2 1214 aa6.73□□□□□ -1.33
CLK1-203ENST00000409769 FGD4Q96M96 766 aa6.73□□□□□ -1.33
CLK1-203ENST00000409769 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
CLK1-203ENST00000409769 KLF4O43474 513 aa6.72□□□□□ -1.33
CLK1-203ENST00000409769 PRICKLE3O43900 615 aaPredicted RBP6.72□□□□□ -1.33
CLK1-203ENST00000409769 SMARCA5O60264 1052 aaPredicted RBP6.72□□□□□ -1.33
CLK1-203ENST00000409769 SARSP49591 514 aaKnown RBP6.72□□□□□ -1.33
CLK1-203ENST00000409769 ZNF827Q17R98 1081 aa6.72□□□□□ -1.33
CLK1-203ENST00000409769 ZXDCQ2QGD7 858 aaPredicted RBP6.72□□□□□ -1.33
CLK1-203ENST00000409769 VHLLQ6RSH7 139 aa6.72□□□□□ -1.33
CLK1-203ENST00000409769 CPNE8Q86YQ8 564 aa6.72□□□□□ -1.33
CLK1-203ENST00000409769 LINC00482Q8N8I6 264 aa6.72□□□□□ -1.33
CLK1-203ENST00000409769 MMP19Q99542 508 aa6.72□□□□□ -1.33
CLK1-203ENST00000409769 GULP1Q9UBP9 304 aa6.72□□□□□ -1.33
CLK1-203ENST00000409769 CADPSQ9ULU8 1353 aa6.71□□□□□ -1.33
CLK1-203ENST00000409769 LAMC3Q9Y6N6 1575 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 C7orf72A4D263 438 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 NOBOXO60393 691 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 CYP2C8P10632 490 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 ATP2B1P20020 1258 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 KRTAP10-2P60368 255 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 SF3A1Q15459 793 aaKnown RBP6.71□□□□□ -1.34
CLK1-203ENST00000409769 FXNQ16595 210 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 NBPF6Q5VWK0 638 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms