RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 FAM160B2Q86V87 743 aa15.57■□□□□ 0.08
SCAF4-202ENST00000399804 DCPSQ96C86 337 aaKnown RBP15.57■□□□□ 0.08
SCAF4-202ENST00000399804 PRMT6Q96LA8 375 aaPredicted RBP15.57■□□□□ 0.08
SCAF4-202ENST00000399804 COL14A1Q05707 1796 aaKnown RBP15.57■□□□□ 0.08
SCAF4-202ENST00000399804 PSDA5PKW4 1024 aaPredicted RBP15.57■□□□□ 0.08
SCAF4-202ENST00000399804 RRAGAQ7L523 313 aa15.57■□□□□ 0.08
SCAF4-202ENST00000399804 CNOT6LQ96LI5 555 aaKnown RBP15.57■□□□□ 0.08
SCAF4-202ENST00000399804 IL17RBQ9NRM6 502 aa15.57■□□□□ 0.08
SCAF4-202ENST00000399804 FAM205AQ6ZU69 1335 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 ROBO1Q9Y6N7 1651 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 FOXP2O15409 715 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 SORBS3O60504 671 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 ARHGAP4P98171 946 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 EVX2Q03828 476 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 PRPF4BQ13523 1007 aaKnown RBP15.56■□□□□ 0.08
SCAF4-202ENST00000399804 R3HDM1Q15032 1099 aaKnown RBP15.56■□□□□ 0.08
SCAF4-202ENST00000399804 KRT26Q7Z3Y9 468 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 CCDC102AQ96A19 550 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 RWDD2AQ9UIY3 292 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 MYO6Q9UM54 1294 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 COL4A3BPQ9Y5P4 624 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 ENTPD3O75355 529 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 ILDR1Q86SU0 546 aaPredicted RBP15.56■□□□□ 0.08
SCAF4-202ENST00000399804 PALM3A6NDB9 673 aaPredicted RBP15.56■□□□□ 0.08
SCAF4-202ENST00000399804 PHACTR2O75167 634 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 EIF3JO75822 258 aaKnown RBP15.56■□□□□ 0.08
SCAF4-202ENST00000399804 ADAM9Q13443 819 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 PKN1Q16512 942 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 SUPT20HL1Q3ZLR7 823 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 VSTM4Q8IW00 320 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 FAM178BQ8IXR5 827 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 MYRIPQ8NFW9 859 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 CAPZA3Q96KX2 299 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 KCNQ5Q9NR82 932 aa15.56■□□□□ 0.08
SCAF4-202ENST00000399804 AP3B2Q13367 1082 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 RASA3Q14644 834 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 GPR162Q16538 588 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 CCDC144BQ3MJ40 725 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 ANKRD35Q8N283 1001 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 NAA15Q9BXJ9 866 aaKnown RBP15.55■□□□□ 0.08
SCAF4-202ENST00000399804 PLA2G4BP0C869 781 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 CCNE1P24864 410 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 CCDC51Q96ER9 411 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 TMEM60Q9H2L4 133 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 NYAP2Q9P242 653 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 ZNF70Q9UC06 446 aaPredicted RBP15.55■□□□□ 0.08
SCAF4-202ENST00000399804 PPP2R2CQ9Y2T4 447 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 USP14P54578 494 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 SPP2Q13103 211 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 GJA10Q969M2 543 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 ZDHHC15Q96MV8 337 aa15.55■□□□□ 0.08
SCAF4-202ENST00000399804 ARMCX3Q9UH62 379 aaPredicted RBP15.55■□□□□ 0.08
SCAF4-202ENST00000399804 HDLBPQ00341 1268 aaKnown RBP15.54■□□□□ 0.08
SCAF4-202ENST00000399804 PPP1R18Q6NYC8 613 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 BPIFA3Q9BQP9 254 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 ZMYND12Q9H0C1 365 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 JMJD4Q9H9V9 463 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 STX10O60499 249 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 DKC1O60832 514 aaKnown RBP eCLIP15.54■□□□□ 0.08
SCAF4-202ENST00000399804 HARSP12081 509 aaKnown RBP15.54■□□□□ 0.08
SCAF4-202ENST00000399804 TERF1P54274 439 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 ETF1P62495 437 aaKnown RBP15.54■□□□□ 0.08
SCAF4-202ENST00000399804 GRM1Q13255 1194 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 TYW1BQ6NUM6 668 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 GADL1Q6ZQY3 521 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 FAM212AQ96EL1 285 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 CARD6Q9BX69 1037 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 EIF2AK2P19525 551 aaKnown RBP15.54■□□□□ 0.08
SCAF4-202ENST00000399804 EEF1GP26641 437 aaKnown RBP15.54■□□□□ 0.08
SCAF4-202ENST00000399804 PRCPP42785 496 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 CYP2J2P51589 502 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 RBL2Q08999 1139 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 CRY2Q49AN0 593 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 FAM163AQ96GL9 167 aaPredicted RBP15.54■□□□□ 0.08
SCAF4-202ENST00000399804 RIC8AQ9NPQ8 531 aa15.54■□□□□ 0.08
SCAF4-202ENST00000399804 LARSQ9P2J5 1176 aaKnown RBP15.54■□□□□ 0.08
SCAF4-202ENST00000399804 TRIM49BA6NDI0 452 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 MAGEA1P43355 309 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 SLC9C1Q4G0N8 1177 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 XKR9Q5GH70 373 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 SLC16A10Q8TF71 515 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 DDX12PQ92771 950 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 IFI16Q16666 785 aaKnown RBP15.53■□□□□ 0.08
SCAF4-202ENST00000399804 GNPTABQ3T906 1256 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 AMIGO3Q86WK7 504 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 IFT74Q96LB3 600 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 TMEM39BQ9GZU3 492 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 BHMT2Q9H2M3 363 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 TUBE1Q9UJT0 475 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 LRRC37A3O60309 1634 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 DDTLA6NHG4 134 aaPredicted RBP15.53■□□□□ 0.08
SCAF4-202ENST00000399804 XRCC5P13010 732 aaKnown RBP15.53■□□□□ 0.08
SCAF4-202ENST00000399804 KRT31Q15323 416 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 ODR4Q5SWX8 454 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 RASGRP2Q7LDG7 609 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 CEP112Q8N8E3 955 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 WRNIP1Q96S55 665 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 WDR11Q9BZH6 1224 aa15.53■□□□□ 0.08
SCAF4-202ENST00000399804 DDX4Q9NQI0 724 aaKnown RBP15.53■□□□□ 0.08
SCAF4-202ENST00000399804 KDM3BQ7LBC6 1761 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms