RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 TRIM32Q13049 653 aa20.3■□□□□ 0.84
CTNS-203ENST00000399306 TYW1BQ6NUM6 668 aa20.3■□□□□ 0.84
CTNS-203ENST00000399306 XRRA1Q6P2D8 792 aa20.3■□□□□ 0.84
CTNS-203ENST00000399306 NECAB1Q8N987 351 aa20.3■□□□□ 0.84
CTNS-203ENST00000399306 SMARCC2Q8TAQ2 1214 aa20.3■□□□□ 0.84
CTNS-203ENST00000399306 BICD2Q8TD16 824 aa20.3■□□□□ 0.84
CTNS-203ENST00000399306 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.3■□□□□ 0.84
CTNS-203ENST00000399306 C6orf50Q9HD87 102 aa20.3■□□□□ 0.84
CTNS-203ENST00000399306 PXMP2Q9NR77 195 aa20.3■□□□□ 0.84
CTNS-203ENST00000399306 COL20A1Q9P218 1284 aa20.3■□□□□ 0.84
CTNS-203ENST00000399306 SMCO2A6NFE2 343 aa20.29■□□□□ 0.84
CTNS-203ENST00000399306 SEPT4O43236 478 aa20.29■□□□□ 0.84
CTNS-203ENST00000399306 HMGN5P82970 282 aaKnown RBP20.29■□□□□ 0.84
CTNS-203ENST00000399306 ST3GAL1Q11201 340 aa20.29■□□□□ 0.84
CTNS-203ENST00000399306 AP3B2Q13367 1082 aa20.29■□□□□ 0.84
CTNS-203ENST00000399306 ACVR2BQ13705 512 aa20.29■□□□□ 0.84
CTNS-203ENST00000399306 TAAR1Q96RJ0 339 aa20.29■□□□□ 0.84
CTNS-203ENST00000399306 TMEM106CQ9BVX2 250 aa20.29■□□□□ 0.84
CTNS-203ENST00000399306 KATNBL1Q9H079 304 aa20.29■□□□□ 0.84
CTNS-203ENST00000399306 RNF208Q9H0X6 261 aa20.29■□□□□ 0.84
CTNS-203ENST00000399306 UNC93B1Q9H1C4 597 aa20.29■□□□□ 0.84
CTNS-203ENST00000399306 ORC3Q9UBD5 711 aaPredicted RBP20.29■□□□□ 0.84
CTNS-203ENST00000399306 LRRC37A2A6NM11 1700 aa20.28■□□□□ 0.84
CTNS-203ENST00000399306 STAM2O75886 525 aa20.28■□□□□ 0.84
CTNS-203ENST00000399306 ZNF865P0CJ78 1059 aaPredicted RBP20.28■□□□□ 0.84
CTNS-203ENST00000399306 CLK2P49760 499 aaKnown RBP20.28■□□□□ 0.84
CTNS-203ENST00000399306 MTFR1Q15390 333 aa20.28■□□□□ 0.84
CTNS-203ENST00000399306 ARHGEF16Q5VV41 709 aa20.28■□□□□ 0.84
CTNS-203ENST00000399306 TMX3Q96JJ7 454 aa20.28■□□□□ 0.84
CTNS-203ENST00000399306 PDCD2LQ9BRP1 358 aa20.28■□□□□ 0.84
CTNS-203ENST00000399306 EHMT1Q9H9B1 1298 aa20.28■□□□□ 0.84
CTNS-203ENST00000399306 RBM47A0AV96 593 aaKnown RBP20.27■□□□□ 0.84
CTNS-203ENST00000399306 AKR1A1P14550 325 aa20.27■□□□□ 0.84
CTNS-203ENST00000399306 HOXA13P31271 388 aaPredicted RBP20.27■□□□□ 0.84
CTNS-203ENST00000399306 GJA8P48165 433 aa20.27■□□□□ 0.84
CTNS-203ENST00000399306 PDE4DQ08499 809 aa20.27■□□□□ 0.84
CTNS-203ENST00000399306 STXBP2Q15833 593 aa20.27■□□□□ 0.84
CTNS-203ENST00000399306 USP17L6PQ6QN14 398 aa20.27■□□□□ 0.84
CTNS-203ENST00000399306 CCDC83Q8IWF9 413 aa20.27■□□□□ 0.84
CTNS-203ENST00000399306 DAGLBQ8NCG7 672 aa20.27■□□□□ 0.84
CTNS-203ENST00000399306 TRPV1Q8NER1 839 aa20.27■□□□□ 0.84
CTNS-203ENST00000399306 SNX21Q969T3 373 aa20.27■□□□□ 0.84
CTNS-203ENST00000399306 PURBQ96QR8 312 aaKnown RBP20.27■□□□□ 0.84
CTNS-203ENST00000399306 FAM184BQ9ULE4 1060 aa20.27■□□□□ 0.84
CTNS-203ENST00000399306 KIAA1217Q5T5P2 1943 aa20.26■□□□□ 0.83
CTNS-203ENST00000399306 SPDYE3A6NKU9 549 aa20.26■□□□□ 0.83
CTNS-203ENST00000399306 EIF3JO75822 258 aaKnown RBP20.26■□□□□ 0.83
CTNS-203ENST00000399306 CD2BP2O95400 341 aaKnown RBP20.26■□□□□ 0.83
CTNS-203ENST00000399306 NR3C2P08235 984 aa20.26■□□□□ 0.83
CTNS-203ENST00000399306 FDPSP14324 419 aaKnown RBP20.26■□□□□ 0.83
CTNS-203ENST00000399306 IQSEC1Q6DN90 963 aa20.26■□□□□ 0.83
CTNS-203ENST00000399306 VSIG10LQ86VR7 867 aa20.26■□□□□ 0.83
CTNS-203ENST00000399306 CRISPLD2Q9H0B8 497 aa20.26■□□□□ 0.83
CTNS-203ENST00000399306 DDX20Q9UHI6 824 aaKnown RBP20.26■□□□□ 0.83
CTNS-203ENST00000399306 SGPL1O95470 568 aa20.25■□□□□ 0.83
CTNS-203ENST00000399306 CCND3P30281 292 aaPredicted RBP20.25■□□□□ 0.83
CTNS-203ENST00000399306 PGM5Q15124 567 aa20.25■□□□□ 0.83
CTNS-203ENST00000399306 FCHSD1Q86WN1 690 aa20.25■□□□□ 0.83
CTNS-203ENST00000399306 VPS54Q9P1Q0 977 aa20.25■□□□□ 0.83
CTNS-203ENST00000399306 EIF2AK2P19525 551 aaKnown RBP20.24■□□□□ 0.83
CTNS-203ENST00000399306 CCND2P30279 289 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 NLRP5P59047 1200 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 PCNX4Q63HM2 1172 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 LHX8Q68G74 356 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 TAPT1Q6NXT6 567 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 KCNV1Q6PIU1 500 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 REXO1Q8N1G1 1221 aaKnown RBP20.24■□□□□ 0.83
CTNS-203ENST00000399306 ANKLE1Q8NAG6 615 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 ALG1Q9BT22 464 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 PHF20Q9BVI0 1012 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 ZHX1Q9UKY1 873 aaPredicted RBP20.24■□□□□ 0.83
CTNS-203ENST00000399306 PCDHA6Q9UN73 950 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 PCDHA4Q9UN74 947 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 Q9Y3F1 56 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 KIF3AQ9Y496 699 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 PCDHA8Q9Y5H6 950 aa20.24■□□□□ 0.83
CTNS-203ENST00000399306 FRMPD3Q5JV73 1810 aa20.23■□□□□ 0.83
CTNS-203ENST00000399306 NKRFO15226 690 aaKnown RBP eCLIP20.23■□□□□ 0.83
CTNS-203ENST00000399306 NKX3-2P78367 333 aa20.23■□□□□ 0.83
CTNS-203ENST00000399306 CUL4AQ13619 759 aa20.23■□□□□ 0.83
CTNS-203ENST00000399306 PRAMEF19Q5SWL8 479 aa20.23■□□□□ 0.83
CTNS-203ENST00000399306 U2AF1L4Q8WU68 220 aaKnown RBP20.23■□□□□ 0.83
CTNS-203ENST00000399306 SCFD2Q8WU76 684 aa20.23■□□□□ 0.83
CTNS-203ENST00000399306 SHISA4Q96DD7 197 aa20.23■□□□□ 0.83
CTNS-203ENST00000399306 OGDHLQ9ULD0 1010 aa20.23■□□□□ 0.83
CTNS-203ENST00000399306 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.23■□□□□ 0.83
CTNS-203ENST00000399306 JAK2O60674 1132 aa20.22■□□□□ 0.83
CTNS-203ENST00000399306 PPFIA3O75145 1194 aa20.22■□□□□ 0.83
CTNS-203ENST00000399306 DUSP11O75319 330 aaKnown RBP20.22■□□□□ 0.83
CTNS-203ENST00000399306 TGFB3P10600 412 aa20.22■□□□□ 0.83
CTNS-203ENST00000399306 RARBP10826 455 aa20.22■□□□□ 0.83
CTNS-203ENST00000399306 CNGA1P29973 690 aa20.22■□□□□ 0.83
CTNS-203ENST00000399306 UBE2SQ16763 222 aa20.22■□□□□ 0.83
CTNS-203ENST00000399306 CCDC144BQ3MJ40 725 aa20.22■□□□□ 0.83
CTNS-203ENST00000399306 DEFB118Q96PH6 123 aa20.22■□□□□ 0.83
CTNS-203ENST00000399306 CCDC85CA6NKD9 419 aa20.21■□□□□ 0.83
CTNS-203ENST00000399306 M0R2N6 131 aa20.21■□□□□ 0.83
CTNS-203ENST00000399306 SREBF1P36956 1147 aa20.21■□□□□ 0.83
CTNS-203ENST00000399306 NPY5RQ15761 445 aa20.21■□□□□ 0.83
CTNS-203ENST00000399306 GNPTABQ3T906 1256 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms