RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SLC1A4P43007 532 aa18.78■□□□□ 0.6
NUP50-202ENST00000396096 RBM5P52756 815 aaKnown RBP eCLIP18.78■□□□□ 0.6
NUP50-202ENST00000396096 MAP3K9P80192 1104 aa18.78■□□□□ 0.6
NUP50-202ENST00000396096 HYIQ5T013 277 aa18.78■□□□□ 0.6
NUP50-202ENST00000396096 ANKRD40Q6AI12 368 aa18.78■□□□□ 0.6
NUP50-202ENST00000396096 KIAA0895Q8NCT3 520 aa18.78■□□□□ 0.6
NUP50-202ENST00000396096 NUP88Q99567 741 aaPredicted RBP18.78■□□□□ 0.6
NUP50-202ENST00000396096 POTEMA6NI47 508 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 FCER1AP12319 257 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 ERVK-24P63145 666 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 MCM6Q14566 821 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 MCTP2Q6DN12 878 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 CENPPQ6IPU0 288 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 FOXR2Q6PJQ5 311 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 SUPT20HQ8NEM7 779 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 SNX29Q8TEQ0 813 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 MBOAT7Q96N66 472 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 TRIM34Q9BYJ4 488 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.77■□□□□ 0.6
NUP50-202ENST00000396096 V9GYY5 206 aaPredicted RBP18.77■□□□□ 0.6
NUP50-202ENST00000396096 CYP3A7-CYP3A51PA0A087WV96 503 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 CYP3A7P24462 503 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 KRT9P35527 623 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 USP11P51784 963 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 ICA1Q05084 483 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 EHHADHQ08426 723 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 SEPT2Q15019 361 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 MOXD1Q6UVY6 613 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 LRRN4CLQ8ND94 238 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 GMCL1Q96IK5 515 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 DNAJC7Q99615 494 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 TUBGCP2Q9BSJ2 902 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 CAPN11Q9UMQ6 739 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 SYNPO2Q9UMS6 1093 aa18.77■□□□□ 0.6
NUP50-202ENST00000396096 FAM196BA6NMK8 535 aa18.76■□□□□ 0.59
NUP50-202ENST00000396096 CHRNA5P30532 468 aa18.76■□□□□ 0.59
NUP50-202ENST00000396096 PSMD2Q13200 908 aa18.76■□□□□ 0.59
NUP50-202ENST00000396096 CDC37Q16543 378 aaPredicted RBP18.76■□□□□ 0.59
NUP50-202ENST00000396096 AOC3Q16853 763 aa18.76■□□□□ 0.59
NUP50-202ENST00000396096 CREBRFQ8IUR6 639 aa18.76■□□□□ 0.59
NUP50-202ENST00000396096 ZSCAN29Q8IWY8 852 aaPredicted RBP18.76■□□□□ 0.59
NUP50-202ENST00000396096 RETREG2Q8NC44 543 aa18.76■□□□□ 0.59
NUP50-202ENST00000396096 NUDT12Q9BQG2 462 aa18.76■□□□□ 0.59
NUP50-202ENST00000396096 PCDHA1Q9Y5I3 950 aa18.76■□□□□ 0.59
NUP50-202ENST00000396096 MRFAP1Q9Y605 127 aa18.76■□□□□ 0.59
NUP50-202ENST00000396096 TADA3O75528 432 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 AP3B2Q13367 1082 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 ABCB5Q2M3G0 1257 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 SHROOM1Q2M3G4 852 aaPredicted RBP18.75■□□□□ 0.59
NUP50-202ENST00000396096 ERCC6LQ2NKX8 1250 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 GUF1Q8N442 669 aaKnown RBP18.75■□□□□ 0.59
NUP50-202ENST00000396096 OR8K1Q8NGG5 319 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 CNOT6LQ96LI5 555 aaKnown RBP18.75■□□□□ 0.59
NUP50-202ENST00000396096 NUP58Q9BVL2 599 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 SEMA6BQ9H3T3 888 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 KDM3AQ9Y4C1 1321 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 TTC26A0AVF1 554 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 EFCAB8A8MWE9 144 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 MNS1Q8NEH6 495 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 CRYGNQ8WXF5 182 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 TTYH3Q9C0H2 523 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 KCNMB3Q9NPA1 279 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 ABCB11O95342 1321 aa18.75■□□□□ 0.59
NUP50-202ENST00000396096 F5H6K3 240 aa18.74■□□□□ 0.59
NUP50-202ENST00000396096 KIF5CO60282 957 aa18.74■□□□□ 0.59
NUP50-202ENST00000396096 H2AFXP16104 143 aaPredicted RBP18.74■□□□□ 0.59
NUP50-202ENST00000396096 MMP14P50281 582 aa18.74■□□□□ 0.59
NUP50-202ENST00000396096 KLRC3Q07444 240 aa18.74■□□□□ 0.59
NUP50-202ENST00000396096 FBXO38Q6PIJ6 1188 aa18.74■□□□□ 0.59
NUP50-202ENST00000396096 KCNK18Q7Z418 384 aa18.74■□□□□ 0.59
NUP50-202ENST00000396096 ANO3Q9BYT9 981 aa18.74■□□□□ 0.59
NUP50-202ENST00000396096 NT5C3AQ9H0P0 336 aa18.74■□□□□ 0.59
NUP50-202ENST00000396096 PCDHA12Q9UN75 941 aa18.74■□□□□ 0.59
NUP50-202ENST00000396096 LUC7L2Q9Y383 392 aaKnown RBP18.74■□□□□ 0.59
NUP50-202ENST00000396096 B4DLN1 442 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 MEIS2O14770 477 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 GRIPAP1Q4V328 841 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 FIGNQ5HY92 759 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 MIIPQ5JXC2 388 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 BTNL9Q6UXG8 535 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 IQCDQ96DY2 449 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 ERGIC2Q96RQ1 377 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 CARD6Q9BX69 1037 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 AMNQ9BXJ7 453 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 TDRD3Q9H7E2 651 aaKnown RBP18.73■□□□□ 0.59
NUP50-202ENST00000396096 SLC39A2Q9NP94 309 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 USP17L15C9J2P7 530 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 USP17L11C9JVI0 530 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 USP17L18D6R9N7 530 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 USP17L20D6RJB6 530 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 PRKCSHP14314 528 aaPredicted RBP18.73■□□□□ 0.59
NUP50-202ENST00000396096 LRRC63Q05C16 580 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 USP17L24Q0WX57 530 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 SLC15A2Q16348 729 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 ECM1Q16610 540 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 MEA1Q16626 185 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms