RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PDGFDQ9GZP0 370 aaPredicted RBP3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 CDIP1Q9H305 208 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 KCNK12Q9HB15 430 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 CLEC1BQ9P126 229 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 FBLN5Q9UBX5 448 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 PCDHA5Q9Y5H7 936 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 H7BY64 318 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 MEFVO15553 781 aaPredicted RBP3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 TMEM253P0C7T8 217 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 GTF2F1P35269 517 aaKnown RBP eCLIP3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 LTBRP36941 435 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 RAP1GAPP47736 663 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 SLC6A11P48066 632 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 CDR1P51861 262 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 SLC9A5Q14940 896 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 PLEKHN1Q494U1 663 aaPredicted RBP3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 ZC3H12BQ5HYM0 836 aaKnown RBP3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 LDHDQ86WU2 507 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 LZTR1Q8N653 840 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 DIO2Q92813 273 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 KCNN1Q92952 543 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 ZFYVE21Q9BQ24 234 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 SPATA9Q9BWV2 254 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 GPR27Q9NS67 375 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 LRP2BPQ9P2M1 347 aa3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 TIMM13Q9Y5L4 95 aaPredicted RBP3.66□□□□□ -1.82
RNU6-541P-201ENST00000384709 TRAV20A0A0B4J274 112 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 NFIBO00712 420 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 U2SURPO15042 1029 aaKnown RBP3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 ZBTB7AO95365 584 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 SNRPB2P08579 225 aaKnown RBP3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 SRSF3P84103 164 aaKnown RBP3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 RAB3GAP1Q15042 981 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 ZNF124Q15973 351 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 NTRK3Q16288 839 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 PRSS53Q2L4Q9 553 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 WWC2Q6AWC2 1192 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 ZC3H14Q6PJT7 736 aaKnown RBP3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 ATG14Q6ZNE5 492 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 SPATC1Q76KD6 591 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 NLRP10Q86W26 655 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 SIAH1Q8IUQ4 282 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 TMEFF1Q8IYR6 380 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 ZBTB38Q8NAP3 1195 aaPredicted RBP3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 DCAF4Q8WV16 495 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 CPA5Q8WXQ8 436 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 KISS1RQ969F8 398 aaPredicted RBP3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 RNF38Q9H0F5 515 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 EPB41L4AQ9HCS5 686 aaPredicted RBP3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 SNTG2Q9NY99 539 aa3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 SMG5Q9UPR3 1016 aaKnown RBP3.65□□□□□ -1.83
RNU6-541P-201ENST00000384709 FAM221BA6H8Z2 402 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 PABPC1P11940 636 aaKnown RBP3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 SDHBP21912 280 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 CFPP27918 469 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 ECI1P42126 302 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 RPL11P62913 178 aaKnown RBP3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 LSAMPQ13449 338 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 KCNA10Q16322 511 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 PKN1Q16512 942 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 EMC4Q5J8M3 183 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 MROH9Q5TGP6 573 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 STYK1Q6J9G0 422 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 NPM2Q86SE8 214 aaKnown RBP3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 ANKLE2Q86XL3 938 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 IGDCC3Q8IVU1 814 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 PPIL6Q8IXY8 311 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 MZB1Q8WU39 189 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 UBXN4Q92575 508 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 PPP1R14AQ96A00 147 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 PEX11GQ96HA9 241 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 SIGLEC10Q96LC7 697 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 DRC1Q96MC2 740 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 DEPDC7Q96QD5 511 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 IER2Q9BTL4 223 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 GULP1Q9UBP9 304 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 RWDD3Q9Y3V2 267 aa3.64□□□□□ -1.83
RNU6-541P-201ENST00000384709 CCDC163A0A0D9SF12 145 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 A0A1W2PQ27 194 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 A0A1W2PQ64 194 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 A0A1W2PQC6 194 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 A0A1W2PQD8 194 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 ZC3H12DA2A288 527 aaKnown RBP3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 TCAF2A6NFQ2 919 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 NUDT19A8MXV4 375 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 WNT9AO14904 365 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 SGSM2O43147 1006 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 KCNQ2O43526 872 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 TADA3O75528 432 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 C6orf222P0C671 652 aaPredicted RBP3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 LCP1P13796 627 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 LINC00310P59036 64 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 HTRA3P83110 453 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 TARBP2Q15633 366 aaKnown RBP3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 MTERF2Q49AM1 385 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 HABP4Q5JVS0 413 aaKnown RBP3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 BICRALQ6AI39 1079 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 CYP4F22Q6NT55 531 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 NSMFQ6X4W1 530 aa3.63□□□□□ -1.83
RNU6-541P-201ENST00000384709 SPOCD1Q6ZMY3 1216 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms