RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 GOLGB1Q14789 3259 aaKnown RBP22.67■■□□□ 1.22
CLN5-201ENST00000377453 KCTD19Q17RG1 926 aaPredicted RBP22.67■■□□□ 1.22
CLN5-201ENST00000377453 SOGA3Q5TF21 947 aa22.67■■□□□ 1.22
CLN5-201ENST00000377453 C10orf67Q8IYJ2 551 aa22.67■■□□□ 1.22
CLN5-201ENST00000377453 GOLGA5Q8TBA6 731 aa22.67■■□□□ 1.22
CLN5-201ENST00000377453 SECISBP2LQ93073 1101 aaKnown RBP22.67■■□□□ 1.22
CLN5-201ENST00000377453 RRP36Q96EU6 259 aaKnown RBP22.67■■□□□ 1.22
CLN5-201ENST00000377453 BICDL2A1A5D9 508 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 BAG3O95817 575 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 KIF5AQ12840 1032 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 UBE2SQ16763 222 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 WDR66Q8TBY9 1149 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 C6orf50Q9HD87 102 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 PSD3Q9NYI0 1048 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 TBC1D7Q9P0N9 293 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 ZC3H4Q9UPT8 1303 aaKnown RBP22.66■■□□□ 1.22
CLN5-201ENST00000377453 VGLL3A8MV65 326 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 VAV2P52735 878 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 RRAGAQ7L523 313 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 FAM71BQ8TC56 605 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 IFIH1Q9BYX4 1025 aaKnown RBP22.66■■□□□ 1.22
CLN5-201ENST00000377453 RABEP2Q9H5N1 569 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 GPCPD1Q9NPB8 672 aa22.66■■□□□ 1.22
CLN5-201ENST00000377453 FEZ2Q9UHY8 353 aaPredicted RBP22.66■■□□□ 1.22
CLN5-201ENST00000377453 LRRC53A6NM62 1247 aa22.65■■□□□ 1.22
CLN5-201ENST00000377453 GGCXP38435 758 aa22.65■■□□□ 1.22
CLN5-201ENST00000377453 ECM1Q16610 540 aa22.65■■□□□ 1.22
CLN5-201ENST00000377453 REXO1Q8N1G1 1221 aaKnown RBP22.65■■□□□ 1.22
CLN5-201ENST00000377453 NOC3LQ8WTT2 800 aaKnown RBP22.65■■□□□ 1.22
CLN5-201ENST00000377453 FGFBP2Q9BYJ0 223 aa22.65■■□□□ 1.22
CLN5-201ENST00000377453 SEC63Q9UGP8 760 aaKnown RBP22.65■■□□□ 1.22
CLN5-201ENST00000377453 ROBO3Q96MS0 1386 aa22.65■■□□□ 1.22
CLN5-201ENST00000377453 LEKR1Q6ZMV7 388 aa22.65■■□□□ 1.22
CLN5-201ENST00000377453 CCDC47Q96A33 483 aaKnown RBP22.65■■□□□ 1.22
CLN5-201ENST00000377453 SPZ1Q9BXG8 430 aa22.65■■□□□ 1.22
CLN5-201ENST00000377453 NDST4Q9H3R1 872 aa22.65■■□□□ 1.22
CLN5-201ENST00000377453 DMGDHQ9UI17 866 aaKnown RBP22.65■■□□□ 1.22
CLN5-201ENST00000377453 SIK3Q9Y2K2 1263 aa22.65■■□□□ 1.22
CLN5-201ENST00000377453 PCDHA13Q9Y5I0 950 aa22.65■■□□□ 1.22
CLN5-201ENST00000377453 LAD1O00515 517 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 KIF11P52732 1056 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 GPSM2P81274 684 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 CACNB1Q02641 598 aaPredicted RBP22.64■■□□□ 1.22
CLN5-201ENST00000377453 PICALMQ13492 652 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 SPA17Q15506 151 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 CALCRLQ16602 461 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 VWA3BQ502W6 1294 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 CALML4Q96GE6 196 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 ERGIC2Q96RQ1 377 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 SELENOOQ9BVL4 669 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 TRIM34Q9BYJ4 488 aa22.64■■□□□ 1.22
CLN5-201ENST00000377453 COL5A3P25940 1745 aaPredicted RBP22.64■■□□□ 1.22
CLN5-201ENST00000377453 BUB1O43683 1085 aa22.64■■□□□ 1.21
CLN5-201ENST00000377453 MYL1P05976 194 aa22.64■■□□□ 1.21
CLN5-201ENST00000377453 ENOX2Q16206 610 aaKnown RBP22.64■■□□□ 1.21
CLN5-201ENST00000377453 GALNT17Q6IS24 598 aa22.64■■□□□ 1.21
CLN5-201ENST00000377453 SV2BQ7L1I2 683 aa22.64■■□□□ 1.21
CLN5-201ENST00000377453 CREG2Q8IUH2 290 aa22.64■■□□□ 1.21
CLN5-201ENST00000377453 ZSCAN29Q8IWY8 852 aaPredicted RBP22.64■■□□□ 1.21
CLN5-201ENST00000377453 PURBQ96QR8 312 aaKnown RBP22.64■■□□□ 1.21
CLN5-201ENST00000377453 LRRC1Q9BTT6 524 aa22.64■■□□□ 1.21
CLN5-201ENST00000377453 NUP58Q9BVL2 599 aa22.64■■□□□ 1.21
CLN5-201ENST00000377453 DEF6Q9H4E7 631 aa22.64■■□□□ 1.21
CLN5-201ENST00000377453 NLRC4Q9NPP4 1024 aa22.64■■□□□ 1.21
CLN5-201ENST00000377453 CCDC88AQ3V6T2 1871 aa22.63■■□□□ 1.21
CLN5-201ENST00000377453 RPS6KA4O75676 772 aa22.63■■□□□ 1.21
CLN5-201ENST00000377453 GFPT1Q06210 699 aaPredicted RBP22.63■■□□□ 1.21
CLN5-201ENST00000377453 CNNM4Q6P4Q7 775 aa22.63■■□□□ 1.21
CLN5-201ENST00000377453 AK8Q96MA6 479 aa22.63■■□□□ 1.21
CLN5-201ENST00000377453 TNNI2P48788 182 aa22.63■■□□□ 1.21
CLN5-201ENST00000377453 LRRC31Q6UY01 552 aa22.63■■□□□ 1.21
CLN5-201ENST00000377453 CCDC170Q8IYT3 715 aa22.63■■□□□ 1.21
CLN5-201ENST00000377453 TANGO6Q9C0B7 1094 aa22.63■■□□□ 1.21
CLN5-201ENST00000377453 TNRC6CQ9HCJ0 1690 aaKnown RBP22.63■■□□□ 1.21
CLN5-201ENST00000377453 CNTNAP4Q9C0A0 1308 aa22.63■■□□□ 1.21
CLN5-201ENST00000377453 CENPPQ6IPU0 288 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 C16orf86Q6ZW13 317 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 FAM114A1Q8IWE2 563 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 F8W031 263 aaPredicted RBP22.62■■□□□ 1.21
CLN5-201ENST00000377453 AGPSO00116 658 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 MYO1CO00159 1063 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 AKR1B10O60218 316 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 PRPF6O94906 941 aaKnown RBP22.62■■□□□ 1.21
CLN5-201ENST00000377453 SSBP05455 408 aaKnown RBP eCLIP22.62■■□□□ 1.21
CLN5-201ENST00000377453 GNA11P29992 359 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 SNX29Q8TEQ0 813 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 LARP4BQ92615 738 aaKnown RBP22.62■■□□□ 1.21
CLN5-201ENST00000377453 MS4A14Q96JA4 679 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 CDK5RAP3Q96JB5 506 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 CRACR2AQ9BSW2 395 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 CUEDC2Q9H467 287 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 SNX12Q9UMY4 172 aa22.62■■□□□ 1.21
CLN5-201ENST00000377453 UFL1O94874 794 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 CKAP4Q07065 602 aaKnown RBP22.61■■□□□ 1.21
CLN5-201ENST00000377453 CCNI2Q6ZMN8 369 aaPredicted RBP22.61■■□□□ 1.21
CLN5-201ENST00000377453 NEDD1Q8NHV4 660 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 DDX12PQ92771 950 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 SH2D4AQ9H788 454 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 PPP4CP60510 307 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 TUBB4BP68371 445 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms